Experiment set15IT008 for Agrobacterium fabrum C58

Compare to:

LB_wheat

200 most important genes:

  gene name fitness t score description  
Atu0602 -5.6 -10.1 glutamine synthetase compare
Atu1030 -4.9 -3.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0421 -4.9 -2.0 ABC transporter, membrane spanning protein compare
Atu2684 -4.8 -3.3 hypothetical protein compare
Atu0659 -4.3 -7.9 NTP pyrophosphohydrolase, MutT family compare
Atu0601 -3.6 -12.3 oxidoreductase compare
Atu0422 -3.4 -3.2 ABC transporter, membrane spanning protein compare
Atu0190 -3.3 -7.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu0189 -3.2 -2.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0999 -3.2 -4.3 magnesium transport protein compare
Atu0141 -3.2 -1.9 cytochrome O ubiquinol oxidase subunit I compare
Atu0030 -3.1 -2.5 phosphocarrier protein HPr compare
Atu1810 -3.0 -1.7 hypothetical protein compare
Atu0188 -2.7 -3.4 ABC transporter, membrane spanning protein (peptide) compare
Atu1774 -2.6 -8.1 ABC transporter, substrate binding protein (peptide) compare
Atu2439 -2.6 -2.0 hypothetical protein compare
Atu8095 -2.2 -9.4 hypothetical protein compare
Atu3763 -1.9 -1.3 hypothetical protein compare
Atu8191 -1.8 -2.7 hypothetical protein compare
Atu0784 -1.7 -2.5 hypothetical protein compare
Atu0912 -1.6 -1.2 Na+/H+ antiporter compare
Atu4317 -1.6 -3.6 TetR family transcriptional regulator compare
Atu3910 -1.6 -4.2 LamB/YcsF family protein compare
Atu0368 -1.6 -4.9 tRNA pseudouridine synthase I compare
Atu1021 -1.6 -3.2 outer membrane protein compare
Atu2831 -1.5 -5.6 glucose inhibited division protein A compare
Atu0086 -1.5 -1.2 ribosome-binding factor A compare
Atu1163 -1.5 -2.4 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2620 -1.4 -1.8 hypothetical protein compare
Atu1803 -1.4 -7.6 cold shock protein compare
Atu2125 -1.3 -2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu6098 -1.3 -1.3 transcriptional regulator, HTH family compare
Atu1076 -1.3 -2.4 colicin V production protein compare
Atu0978 -1.3 -5.3 two component response regulator compare
Atu4635 -1.3 -5.4 hypothetical protein compare
Atu2245 -1.3 -8.1 Na+/Pi-cotransporter compare
Atu0876 -1.2 -1.3 superoxide dismutase compare
Atu0331 -1.2 -3.6 sigma-54 modulation protein compare
Atu1099 -1.2 -5.0 hypothetical protein compare
Atu0499 -1.2 -5.3 hypothetical protein compare
Atu0533 -1.1 -2.9 putative inhibitor of septum formation compare
Atu0925 -1.1 -3.7 hypothetical protein compare
Atu3598 -1.1 -1.8 thiol:disulfide interchange protein compare
Atu3727 -1.1 -3.8 hypothetical protein compare
Atu2832 -1.1 -3.2 tRNA modification GTPase compare
Atu1285 -1.1 -5.8 metal dependent hydrolase compare
Atu1678 -1.1 -3.8 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu3697 -1.1 -3.6 ATP-dependent protease LA 2 compare
Atu3008 -1.1 -1.1 hypothetical protein compare
Atu1677 -1.1 -3.6 queuine tRNA-ribosyltransferase compare
Atu0026 -1.1 -1.1 hypothetical protein compare
Atu0971 -1.0 -3.6 two component sensor kinase compare
Atu0434 -1.0 -2.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1300 -1.0 -6.3 MFS permease compare
Atu0388 -1.0 -7.4 two component sensor kinase compare
Atu1546 -1.0 -3.2 transcriptional regulator, MerR family compare
Atu1683 -1.0 -1.8 hypothetical protein compare
Atu2555 -1.0 -2.5 L-lysine 2,3-aminomutase compare
Atu2746 -1.0 -2.1 hypothetical protein compare
Atu3613 -1.0 -4.1 hypothetical protein compare
Atu0498 -0.9 -4.3 hypothetical protein compare
Atu0923 -0.9 -3.5 hypothetical protein compare
Atu4893 -0.9 -4.8 hypothetical protein compare
Atu0142 -0.9 -1.3 cytochrome o ubiquinol oxidase subunit II compare
Atu8130 -0.9 -4.7 hypothetical protein compare
Atu1645 -0.9 -4.5 ABC transporter, substrate binding protein compare
Atu1874 -0.9 -2.1 RecA protein compare
Atu3517 -0.9 -3.8 acetyltransferase compare
Atu0769 -0.9 -0.9 protoheme IX farnesyltransferase compare
Atu1103 -0.9 -2.0 rRNA-adenine N6,N6-dimethyltransferase compare
Atu5513 -0.8 -2.1 cold shock protein compare
Atu5125 -0.8 -3.9 GntR family transcriptional regulator compare
Atu4161 -0.8 -1.3 hypothetical protein compare
Atu0153 -0.8 -3.8 transcriptional regulator, Fur family compare
Atu4214 -0.8 -2.6 cold shock protein compare
Atu3698 -0.8 -2.4 thioredoxin compare
Atu3886 -0.8 -5.3 lysophospholipase compare
Atu2217 -0.8 -3.3 hypothetical protein compare
Atu0777 -0.8 -1.0 hypothetical protein compare
Atu0926 -0.8 -3.0 hypothetical protein compare
Atu0544 -0.8 -2.0 hypothetical protein compare
Atu3009 -0.8 -1.1 exopolysaccharide production protein compare
Atu3466 -0.8 -1.8 ArsR family transcriptional regulator compare
Atu1364 -0.8 -2.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu4469 -0.8 -3.2 iron ABC transporter permease compare
Atu3006 -0.8 -3.4 hypothetical protein compare
Atu0051 -0.8 -3.6 two component sensor kinase compare
Atu4502 -0.8 -3.4 cobalamin synthesis protein compare
Atu6114 -0.7 -1.6 hypothetical protein compare
Atu2239 -0.7 -2.1 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu1527 -0.7 -3.2 nitrogen fixation protein FixS compare
Atu5470 -0.7 -0.8 hypothetical protein compare
Atu3754 -0.7 -1.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2824 -0.7 -2.8 hypothetical protein compare
Atu4677 -0.7 -1.2 hypothetical protein compare
Atu5430 -0.7 -1.2 hypothetical protein compare
Atu0269 -0.7 -3.2 exodeoxyribonuclease VII large subunit compare
Atu4711 -0.7 -3.6 two component sensor kinase compare
Atu1739 -0.7 -2.7 permease compare
Atu3144 -0.7 -2.8 GntR family transcriptional regulator compare
Atu0931 -0.7 -4.2 penicillin binding protein compare
Atu0251 -0.7 -5.3 hypothetical protein compare
Atu0085 -0.7 -2.8 tRNA pseudouridine 55 synthase compare
Atu3779 -0.7 -3.9 lytic murein transglycosylase compare
Atu1566 -0.7 -0.9 hypothetical protein compare
Atu4890 -0.7 -1.7 IS426 transposase compare
Atu2809 -0.7 -4.0 cobalamin biosynthesis protein compare
Atu2722 -0.7 -4.2 porin compare
Atu3777 -0.7 -4.7 hypothetical protein compare
Atu0479 -0.6 -3.1 ABC transporter, substrate binding protein (amino acid) compare
Atu0149 -0.6 -2.2 enoyl-(acyl-carrier-protein) reductase compare
Atu4724 -0.6 -1.6 hypothetical protein compare
Atu5485 -0.6 -1.6 hypothetical protein compare
Atu1793 -0.6 -3.5 phosphatidylcholine synthase compare
Atu2207 -0.6 -2.0 two component sensor kinase compare
Atu0976 -0.6 -1.4 cycL protein compare
Atu0050 -0.6 -2.6 two component response regulator compare
Atu2640 -0.6 -2.7 hypothetical protein compare
Atu1203 -0.6 -2.2 hypothetical protein compare
Atu2592 -0.6 -3.6 hypothetical protein compare
Atu2067 -0.6 -0.6 hypothetical protein compare
Atu1495 -0.6 -1.6 hypothetical protein compare
Atu4217 -0.6 -0.9 TetR family transcriptional regulator compare
Atu3012 -0.6 -1.4 hypothetical protein compare
Atu1019 -0.6 -1.7 hypothetical protein compare
Atu6189 -0.6 -1.3 protein secretion chaperone compare
Atu1129 -0.6 -2.8 excinuclease ABC chain C compare
Atu2606 -0.6 -2.0 transcriptional regulator, GntR family compare
Atu0781 -0.6 -1.7 hypothetical protein compare
Atu0109 -0.6 -3.0 transcriptional regulator, MarR family compare
Atu1518 -0.6 -2.3 transcriptional regulator, Fur family compare
Atu3634 -0.6 -2.5 penicillin-binding protein dacf precursor compare
Atu1238 -0.6 -4.1 polysaccharide export protein compare
Atu0749 -0.6 -2.1 biotin synthesis BioY protein compare
Atu2554 -0.6 -1.1 lysyl-tRNA synthetase compare
Atu4892 -0.6 -4.6 hypothetical protein compare
Atu3472 -0.6 -2.5 2-oxoisovalerate dehydrogenase subunit beta compare
Atu3248 -0.6 -3.0 cell division inhibitor compare
Atu4505 -0.6 -3.1 LacI family transcriptional regulator compare
Atu1801 -0.6 -1.4 hypothetical protein compare
Atu0979 -0.6 -3.1 two component sensor kinase compare
Atu3299 -0.6 -1.2 hypothetical protein compare
Atu8053 -0.6 -1.9 hypothetical protein compare
Atu2796 -0.6 -3.1 precorrin-4 C11-methyltransferase compare
Atu3249 -0.6 -2.8 septum formation inhibitor compare
Atu0836 -0.6 -1.2 Glutathione-S-transferase compare
Atu1535 -0.5 -1.5 cytochrome c oxidase, FixQ chain compare
Atu5057 -0.5 -1.0 hypothetical protein compare
Atu4894 -0.5 -3.2 transposase compare
Atu3095 -0.5 -2.1 hypothetical protein compare
Atu5475 -0.5 -1.6 hypothetical protein compare
Atu2057 -0.5 -1.5 DNA helicase II compare
Atu8096 -0.5 -1.1 hypothetical protein compare
Atu0184 -0.5 -1.3 glucokinase compare
Atu4148 -0.5 -3.3 UDP-glucuronic acid epimerase compare
Atu1513 -0.5 -2.7 ABC excinuclease subunit A compare
Atu1303 -0.5 -3.5 exoribonuclease compare
Atu5501 -0.5 -1.4 hypothetical protein compare
Atu1466 -0.5 -1.2 hypothetical protein compare
Atu0703 -0.5 -1.4 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu1354 -0.5 -0.8 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase compare
Atu1500 -0.5 -1.9 rare lipoprotein A compare
Atu5540 -0.5 -0.7 hypothetical protein compare
Atu1589 -0.5 -2.1 aminotransferase, class I compare
Atu1725 -0.5 -1.5 hypothetical protein compare
Atu8034 -0.5 -2.7 hypothetical protein compare
Atu1359 -0.5 -0.6 dnaK deletion suppressor protein compare
Atu3289 -0.5 -1.7 thiamine-phosphate pyrophosphorylase compare
Atu2808 -0.5 -2.5 cobyric acid synthase compare
Atu2304 -0.5 -3.5 bacteroid development protein compare
Atu3486 -0.5 -1.6 DeoR family transcriptional regulator compare
Atu3010 -0.5 -3.5 hypothetical protein compare
Atu4610 -0.5 -3.5 sugar nucleotide epimerase/dehydratase compare
Atu0680 -0.5 -2.1 hypothetical protein compare
Atu0361 -0.5 -1.1 transcriptional regulator compare
Atu1646 -0.5 -2.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu6113 -0.5 -3.2 conserved hypothetical protein compare
Atu2799 -0.5 -1.6 precorrin-6x reductase compare
Atu4407 -0.5 -1.5 periplasmic nitrate reductase, NapD protein compare
Atu2489 -0.5 -2.7 hypothetical protein compare
Atu2821 -0.5 -2.6 transcriptional regulator, GntR family compare
Atu5088 -0.5 -1.5 hypothetical protein compare
Atu3519 -0.5 -2.5 peptidyl-prolyl cis-trans isomerase compare
Atu1952 -0.5 -0.9 hypothetical protein compare
Atu1619 -0.5 -1.8 protein-export membrane protein SECG compare
Atu2800 -0.5 -1.5 precorrin-3B C17-methyltransferase compare
Atu1056 -0.5 -2.2 hypothetical protein compare
Atu2238 -0.5 -2.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu8087 -0.5 -0.5 putative peptidoglycan binding protein compare
Atu1074 -0.5 -3.3 NAD/NADP dependent oxidoreductase compare
Atu0742 -0.5 -2.2 hypothetical protein compare
Atu0636 -0.5 -3.0 hypothetical protein compare
Atu8117 -0.5 -1.5 hypothetical protein compare
Atu1530 -0.5 -3.2 nitrogen fixation protein FixG compare
Atu2515 -0.5 -2.5 ABC transporter, nucleotide binding/ATPase protein (dipeptide) compare
Atu3120 -0.5 -0.8 hypothetical protein compare
Atu0977 -0.5 -1.7 serine protease DO-like protease compare
Atu3011 -0.5 -1.5 ArsR family transcriptional regulator compare
Atu1508 -0.5 -2.0 hypothetical protein compare
Atu2406 -0.5 -1.4 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For lb_wheat Wheat in Agrobacterium fabrum C58

For lb_wheat Wheat across organisms