Experiment set15IT005 for Agrobacterium fabrum C58

Compare to:

LB control

200 most important genes:

  gene name fitness t score description  
Atu0602 -6.0 -7.2 glutamine synthetase compare
Atu0421 -4.8 -2.1 ABC transporter, membrane spanning protein compare
Atu2684 -4.8 -3.3 hypothetical protein compare
Atu0659 -4.7 -7.2 NTP pyrophosphohydrolase, MutT family compare
Atu0188 -4.4 -4.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0422 -4.1 -2.8 ABC transporter, membrane spanning protein compare
Atu0601 -3.7 -11.5 oxidoreductase compare
Atu3598 -3.5 -3.2 thiol:disulfide interchange protein compare
Atu0999 -3.3 -4.0 magnesium transport protein compare
Atu1030 -3.2 -3.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu6098 -3.1 -1.8 transcriptional regulator, HTH family compare
Atu0190 -2.7 -8.3 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu1774 -2.6 -7.9 ABC transporter, substrate binding protein (peptide) compare
Atu1021 -2.4 -3.9 outer membrane protein compare
Atu0368 -2.2 -4.8 tRNA pseudouridine synthase I compare
Atu8095 -2.2 -9.0 hypothetical protein compare
Atu0189 -2.1 -3.2 ABC transporter, membrane spanning protein (peptide) compare
Atu0769 -2.1 -1.9 protoheme IX farnesyltransferase compare
Atu4217 -2.0 -2.3 TetR family transcriptional regulator compare
Atu0030 -2.0 -2.3 phosphocarrier protein HPr compare
Atu3763 -1.9 -1.3 hypothetical protein compare
Atu3009 -1.8 -1.4 exopolysaccharide production protein compare
Atu4317 -1.8 -2.4 TetR family transcriptional regulator compare
Atu2125 -1.7 -2.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu1810 -1.7 -1.6 hypothetical protein compare
Atu3910 -1.7 -5.0 LamB/YcsF family protein compare
Atu2832 -1.6 -4.6 tRNA modification GTPase compare
Atu2057 -1.6 -3.3 DNA helicase II compare
Atu0912 -1.6 -1.3 Na+/H+ antiporter compare
Atu0777 -1.6 -1.7 hypothetical protein compare
Atu1076 -1.6 -3.5 colicin V production protein compare
Atu0784 -1.6 -3.6 hypothetical protein compare
Atu0331 -1.5 -3.0 sigma-54 modulation protein compare
Atu2831 -1.5 -5.6 glucose inhibited division protein A compare
Atu3697 -1.4 -4.7 ATP-dependent protease LA 2 compare
Atu1677 -1.4 -3.6 queuine tRNA-ribosyltransferase compare
Atu0434 -1.4 -1.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1739 -1.4 -4.3 permease compare
Atu4635 -1.4 -4.5 hypothetical protein compare
Atu1163 -1.3 -2.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0051 -1.3 -4.2 two component sensor kinase compare
Atu2555 -1.3 -3.2 L-lysine 2,3-aminomutase compare
Atu3183 -1.3 -1.1 hypothetical protein compare
Atu0499 -1.3 -5.8 hypothetical protein compare
Atu3012 -1.3 -2.6 hypothetical protein compare
Atu0978 -1.2 -5.8 two component response regulator compare
Atu1803 -1.2 -4.1 cold shock protein compare
Atu2245 -1.2 -6.9 Na+/Pi-cotransporter compare
Atu3008 -1.2 -1.3 hypothetical protein compare
Atu0025 -1.2 -2.2 hypothetical protein compare
Atu1874 -1.1 -3.6 RecA protein compare
Atu0486 -1.1 -5.0 dihydroorotate dehydrogenase compare
Atu1099 -1.1 -4.5 hypothetical protein compare
Atu3001 -1.1 -2.2 hypothetical protein compare
Atu1300 -1.1 -6.5 MFS permease compare
Atu0498 -1.1 -6.0 hypothetical protein compare
Atu0533 -1.1 -2.8 putative inhibitor of septum formation compare
Atu8191 -1.1 -2.1 hypothetical protein compare
Atu3006 -1.0 -3.4 hypothetical protein compare
Atu0399 -1.0 -3.3 dihydroorotase compare
Atu0388 -1.0 -6.9 two component sensor kinase compare
Atu0184 -1.0 -1.6 glucokinase compare
Atu3634 -1.0 -2.5 penicillin-binding protein dacf precursor compare
Atu3698 -1.0 -4.4 thioredoxin compare
Atu4892 -1.0 -7.1 hypothetical protein compare
Atu0923 -1.0 -3.4 hypothetical protein compare
Atu1285 -1.0 -5.4 metal dependent hydrolase compare
Atu3010 -0.9 -5.2 hypothetical protein compare
Atu0142 -0.9 -1.4 cytochrome o ubiquinol oxidase subunit II compare
Atu0050 -0.9 -4.1 two component response regulator compare
Atu1845 -0.9 -3.3 phosphoribosylformylglycinamidine synthase I compare
Atu1141 -0.9 -3.9 Phosphoribosylglycinamide synthetase compare
Atu2554 -0.9 -1.5 lysyl-tRNA synthetase compare
Atu3727 -0.9 -3.7 hypothetical protein compare
Atu4893 -0.9 -4.5 hypothetical protein compare
Atu4894 -0.9 -4.9 transposase compare
Atu1359 -0.9 -1.0 dnaK deletion suppressor protein compare
Atu1495 -0.9 -2.2 hypothetical protein compare
Atu1103 -0.9 -2.8 rRNA-adenine N6,N6-dimethyltransferase compare
Atu0106 -0.9 -1.5 cold shock protein compare
Atu4889 -0.9 -5.0 hypothetical protein compare
Atu0298 -0.9 -4.8 orotidine 5 compare
Atu1327 -0.9 -2.5 NADH-ubiquinone oxidoreductase compare
Atu2083 -0.9 -2.4 DNA repair protein RecN compare
Atu2824 -0.9 -3.0 hypothetical protein compare
Atu0141 -0.8 -1.1 cytochrome O ubiquinol oxidase subunit I compare
Atu1850 -0.8 -3.2 phosphoribosylformylglycinamidine synthetase II compare
Atu4161 -0.8 -1.5 hypothetical protein compare
Atu6114 -0.8 -1.6 hypothetical protein compare
Atu2207 -0.8 -2.4 two component sensor kinase compare
Atu4469 -0.8 -3.4 iron ABC transporter permease compare
Atu8130 -0.8 -4.5 hypothetical protein compare
Atu1891 -0.8 -2.7 cobalamin biosynthesis protein compare
Atu1056 -0.8 -2.7 hypothetical protein compare
Atu8138 -0.8 -1.7 hypothetical protein compare
Atu3267 -0.8 -2.8 dipeptide ABC transporter permease compare
Atu1592 -0.8 -3.8 hypothetical protein compare
Atu2044 -0.8 -2.9 HFLC protein compare
Atu2439 -0.8 -0.9 hypothetical protein compare
Atu1678 -0.7 -2.6 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu1573 -0.7 -1.3 hypothetical protein compare
Atu1844 -0.7 -1.7 Phosphoribosylformylglycinamidine synthetase compare
Atu1793 -0.7 -4.2 phosphatidylcholine synthase compare
Atu3777 -0.7 -5.0 hypothetical protein compare
Atu4711 -0.7 -3.7 two component sensor kinase compare
Atu1619 -0.7 -2.3 protein-export membrane protein SECG compare
Atu3754 -0.7 -3.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0566 -0.7 -1.6 hypothetical protein compare
Atu2017 -0.7 -0.9 hypothetical protein compare
Atu1629 -0.7 -1.0 transcriptional regulator, ArsR family compare
Atu2798 -0.7 -2.9 precorrin-6y methyltransferase compare
Atu1364 -0.7 -3.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3014 -0.7 -1.9 hypothetical protein compare
Atu2378 -0.7 -2.4 hypothetical protein compare
Atu0086 -0.7 -0.8 ribosome-binding factor A compare
Atu0269 -0.7 -2.9 exodeoxyribonuclease VII large subunit compare
Atu1760 -0.7 -1.2 hypothetical protein compare
Atu0781 -0.7 -2.3 hypothetical protein compare
Atu3663 -0.7 -0.9 hypothetical protein compare
Atu3517 -0.7 -1.9 acetyltransferase compare
Atu3013 -0.6 -2.6 hypothetical protein compare
Atu3121 -0.6 -1.0 cold shock protein compare
Atu0780 -0.6 -3.4 hypothetical protein compare
Atu0479 -0.6 -2.6 ABC transporter, substrate binding protein (amino acid) compare
Atu0692 -0.6 -3.4 glutathione-regulated potassium-efflux system protein compare
Atu2692 -0.6 -2.3 intracellular septation protein compare
Atu0026 -0.6 -0.8 hypothetical protein compare
Atu3015 -0.6 -3.3 hypothetical protein compare
Atu0251 -0.6 -4.1 hypothetical protein compare
Atu3613 -0.6 -2.1 hypothetical protein compare
Atu5451 -0.6 -1.2 hypothetical protein compare
Atu3249 -0.6 -3.2 septum formation inhibitor compare
Atu8088 -0.6 -0.8 hypothetical protein compare
Atu0876 -0.6 -1.1 superoxide dismutase compare
Atu0926 -0.6 -2.5 hypothetical protein compare
Atu3467 -0.6 -2.0 hypothetical protein compare
Atu2746 -0.6 -2.4 hypothetical protein compare
Atu0977 -0.6 -2.2 serine protease DO-like protease compare
Atu1967 -0.6 -2.0 hypothetical protein compare
Atu3780 -0.6 -2.9 hypothetical protein compare
Atu0979 -0.6 -3.2 two component sensor kinase compare
Atu0972 -0.6 -1.7 lipA protein compare
Atu2073 -0.6 -2.2 membrane protein compare
Atu0690 -0.6 -1.5 hypothetical protein compare
Atu1238 -0.6 -4.3 polysaccharide export protein compare
Atu3016 -0.6 -3.2 phosphoglyceromutase compare
Atu0995 -0.6 -2.8 hypothetical protein compare
Atu3248 -0.6 -3.3 cell division inhibitor compare
Atu4890 -0.6 -1.6 IS426 transposase compare
Atu2267 -0.6 -3.3 hypothetical protein compare
Atu8202 -0.6 -2.4 hypothetical protein compare
Atu1470 -0.6 -0.8 Camphor resistance protein compare
Atu6113 -0.6 -3.2 conserved hypothetical protein compare
Atu2617 -0.5 -2.4 chemotaxis protein compare
Atu0645 -0.5 -0.8 hypothetical protein compare
Atu3395 -0.5 -3.0 iron (III ABC transporter permease ABC transporter permease compare
Atu3644 -0.5 -2.2 hypothetical protein compare
Atu3739 -0.5 -2.0 phosphoglycerate kinase compare
Atu1446 -0.5 -1.6 two component response regulator compare
Atu1859 -0.5 -2.2 glutaminase A compare
Atu2304 -0.5 -3.5 bacteroid development protein compare
Atu2235 -0.5 -1.2 hypothetical protein compare
Atu0430 -0.5 -3.5 chaperonin (heat shock protein hsp33) compare
Atu2640 -0.5 -2.3 hypothetical protein compare
Atu1239 -0.5 -4.1 exopolysaccharide production protein compare
Atu4502 -0.5 -3.2 cobalamin synthesis protein compare
Atu8046 -0.5 -1.2 hypothetical protein compare
Atu2464 -0.5 -1.6 formyltetrahydrofolate deformylase compare
Atu3886 -0.5 -3.5 lysophospholipase compare
Atu1546 -0.5 -2.5 transcriptional regulator, MerR family compare
Atu2786 -0.5 -2.6 hypothetical protein compare
Atu0109 -0.5 -2.2 transcriptional regulator, MarR family compare
Atu4671 -0.5 -1.1 response regulator compare
Atu0931 -0.5 -3.2 penicillin binding protein compare
Atu2489 -0.5 -3.0 hypothetical protein compare
Atu2578 -0.5 -1.3 cAMP-dependent protein kinase regulatory subunit compare
Atu4187 -0.5 -0.8 tRNA-Met compare
Atu3032 -0.5 -2.3 hypothetical protein compare
Atu0658 -0.5 -3.7 phosphate permease compare
Atu3593 -0.5 -3.1 hypothetical protein compare
Atu3083 -0.5 -2.3 hypothetical protein compare
Atu4567 -0.5 -2.5 ROK family transcriptional regulator compare
Atu2028 -0.5 -1.3 transcriptional regulator, ArsR family compare
Atu3506 -0.5 -1.7 hypothetical protein compare
Atu0036 -0.5 -1.4 hypothetical protein compare
Atu3394 -0.5 -1.9 iron ABC transporter ATPase compare
Atu0971 -0.5 -1.8 two component sensor kinase compare
Atu1182 -0.5 -1.2 hypothetical protein compare
Atu3912 -0.5 -2.9 hypothetical protein compare
Atu8053 -0.5 -2.2 hypothetical protein compare
Atu3018 -0.5 -2.5 hypothetical protein compare
Atu3469 -0.5 -1.5 phosphoglyceromutase compare
Atu4881 -0.5 -2.2 hypothetical protein compare
Atu3775 -0.5 -1.4 hypothetical protein compare
Atu4896 -0.5 -0.7 acetyltransferase compare
Atu5125 -0.5 -2.1 GntR family transcriptional regulator compare
Atu0961 -0.5 -1.8 hypothetical protein compare
Atu1621 -0.5 -2.7 hypothetical protein compare
Atu8131 -0.5 -3.3 pH adaption potassium efflux system protein compare
Atu0063 -0.5 -2.1 ABC transporter, substrate binding protein (sugar) compare


Specific Phenotypes

For 1 genes in this experiment