Experiment set15IT004 for Agrobacterium fabrum C58

Compare to:

LB control

200 most important genes:

  gene name fitness t score description  
Atu0602 -6.2 -7.4 glutamine synthetase compare
Atu0421 -4.9 -2.0 ABC transporter, membrane spanning protein compare
Atu0189 -4.3 -3.3 ABC transporter, membrane spanning protein (peptide) compare
Atu0422 -4.3 -2.8 ABC transporter, membrane spanning protein compare
Atu0659 -3.8 -7.4 NTP pyrophosphohydrolase, MutT family compare
Atu0188 -3.8 -5.1 ABC transporter, membrane spanning protein (peptide) compare
Atu0999 -3.6 -3.5 magnesium transport protein compare
Atu0601 -3.2 -12.6 oxidoreductase compare
Atu1359 -3.1 -1.8 dnaK deletion suppressor protein compare
Atu2684 -3.1 -1.9 hypothetical protein compare
Atu0769 -2.8 -1.9 protoheme IX farnesyltransferase compare
Atu0030 -2.6 -2.6 phosphocarrier protein HPr compare
Atu0190 -2.6 -8.5 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu8095 -2.5 -10.5 hypothetical protein compare
Atu0434 -2.5 -3.1 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0912 -2.4 -1.2 Na+/H+ antiporter compare
Atu1774 -2.2 -8.9 ABC transporter, substrate binding protein (peptide) compare
Atu2439 -2.2 -2.1 hypothetical protein compare
Atu0784 -2.1 -2.7 hypothetical protein compare
Atu3910 -2.1 -5.8 LamB/YcsF family protein compare
Atu1030 -2.0 -2.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0876 -1.9 -2.5 superoxide dismutase compare
Atu1021 -1.9 -3.6 outer membrane protein compare
Atu2831 -1.7 -6.1 glucose inhibited division protein A compare
Atu4161 -1.6 -2.8 hypothetical protein compare
Atu1810 -1.6 -1.4 hypothetical protein compare
Atu3001 -1.6 -3.2 hypothetical protein compare
Atu0978 -1.6 -8.3 two component response regulator compare
Atu3009 -1.5 -2.2 exopolysaccharide production protein compare
Atu3763 -1.5 -1.2 hypothetical protein compare
Atu1076 -1.5 -3.8 colicin V production protein compare
Atu3008 -1.5 -1.5 hypothetical protein compare
Atu1163 -1.5 -2.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu2125 -1.4 -2.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu8191 -1.4 -2.6 hypothetical protein compare
Atu0925 -1.4 -4.5 hypothetical protein compare
Atu3727 -1.4 -5.1 hypothetical protein compare
Atu0050 -1.4 -5.0 two component response regulator compare
Atu0498 -1.4 -6.7 hypothetical protein compare
Atu0141 -1.4 -1.4 cytochrome O ubiquinol oxidase subunit I compare
Atu1803 -1.4 -7.4 cold shock protein compare
Atu2555 -1.4 -5.0 L-lysine 2,3-aminomutase compare
Atu3598 -1.3 -2.1 thiol:disulfide interchange protein compare
Atu1739 -1.3 -3.9 permease compare
Atu3469 -1.3 -3.3 phosphoglyceromutase compare
Atu8082 -1.3 -3.0 hypothetical protein compare
Atu4317 -1.3 -2.9 TetR family transcriptional regulator compare
Atu3613 -1.3 -5.6 hypothetical protein compare
Atu0399 -1.3 -4.3 dihydroorotase compare
Atu0368 -1.3 -5.2 tRNA pseudouridine synthase I compare
Atu2692 -1.3 -3.7 intracellular septation protein compare
Atu4635 -1.2 -4.5 hypothetical protein compare
Atu0388 -1.2 -8.7 two component sensor kinase compare
Atu3005 -1.2 -1.7 hypothetical protein compare
Atu0499 -1.2 -6.6 hypothetical protein compare
Atu2245 -1.1 -7.3 Na+/Pi-cotransporter compare
Atu2462 -1.1 -3.3 hypothetical protein compare
Atu2746 -1.1 -3.9 hypothetical protein compare
Atu1678 -1.1 -5.0 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu1874 -1.1 -3.1 RecA protein compare
Atu1099 -1.1 -5.0 hypothetical protein compare
Atu4469 -1.1 -3.4 iron ABC transporter permease compare
Atu0923 -1.1 -3.6 hypothetical protein compare
Atu1677 -1.0 -3.5 queuine tRNA-ribosyltransferase compare
Atu1140 -1.0 -3.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1850 -1.0 -2.9 phosphoribosylformylglycinamidine synthetase II compare
Atu0298 -1.0 -4.8 orotidine 5 compare
Atu1466 -1.0 -1.6 hypothetical protein compare
Atu0400 -1.0 -2.9 orotate phosphoribosyltransferase compare
Atu2207 -1.0 -3.1 two component sensor kinase compare
Atu3697 -1.0 -3.1 ATP-dependent protease LA 2 compare
Atu2832 -1.0 -3.4 tRNA modification GTPase compare
Atu6098 -1.0 -1.0 transcriptional regulator, HTH family compare
Atu3006 -1.0 -2.7 hypothetical protein compare
Atu8130 -0.9 -4.6 hypothetical protein compare
Atu4894 -0.9 -5.1 transposase compare
Atu0051 -0.9 -3.8 two component sensor kinase compare
Atu4893 -0.9 -3.6 hypothetical protein compare
Atu8138 -0.9 -1.7 hypothetical protein compare
Atu0486 -0.9 -4.3 dihydroorotate dehydrogenase compare
Atu2710 -0.9 -4.9 hypothetical protein compare
Atu2824 -0.9 -3.6 hypothetical protein compare
Atu1300 -0.9 -5.6 MFS permease compare
Atu4890 -0.9 -2.2 IS426 transposase compare
Atu4892 -0.9 -6.1 hypothetical protein compare
Atu0533 -0.9 -3.1 putative inhibitor of septum formation compare
Atu0152 -0.8 -2.0 hypothetical protein compare
Atu1592 -0.8 -4.8 hypothetical protein compare
Atu1793 -0.8 -3.8 phosphatidylcholine synthase compare
Atu0658 -0.8 -4.8 phosphate permease compare
Atu1844 -0.8 -2.8 Phosphoribosylformylglycinamidine synthetase compare
Atu1285 -0.8 -3.7 metal dependent hydrolase compare
Atu4173 -0.8 -1.7 phosphoenolpyruvate-protein phosphotransferase compare
Atu5125 -0.8 -3.5 GntR family transcriptional regulator compare
Atu3011 -0.8 -3.0 ArsR family transcriptional regulator compare
Atu0953 -0.8 -0.8 hypothetical protein compare
Atu2554 -0.8 -1.3 lysyl-tRNA synthetase compare
Atu2807 -0.8 -5.0 cob(I)alamin adenosyltransferase compare
Atu1141 -0.8 -3.1 Phosphoribosylglycinamide synthetase compare
Atu1845 -0.8 -3.2 phosphoribosylformylglycinamidine synthase I compare
Atu3248 -0.7 -3.9 cell division inhibitor compare
Atu1701 -0.7 -1.1 protein-L-isoaspartate O-methyltransferase compare
Atu1484 -0.7 -1.9 transcriptional regulator compare
Atu2798 -0.7 -2.4 precorrin-6y methyltransferase compare
Atu3395 -0.7 -4.0 iron (III ABC transporter permease ABC transporter permease compare
Atu0361 -0.7 -2.0 transcriptional regulator compare
Atu4472 -0.7 -2.6 hypothetical protein compare
Atu0269 -0.7 -3.2 exodeoxyribonuclease VII large subunit compare
Atu0972 -0.7 -2.1 lipA protein compare
Atu2489 -0.7 -3.4 hypothetical protein compare
Atu0331 -0.7 -1.1 sigma-54 modulation protein compare
Atu3010 -0.7 -4.3 hypothetical protein compare
Atu0184 -0.7 -1.6 glucokinase compare
Atu8029 -0.7 -1.4 hypothetical protein compare
Atu0931 -0.7 -4.0 penicillin binding protein compare
Atu1056 -0.7 -3.0 hypothetical protein compare
Atu5045 -0.7 -1.8 hypothetical protein compare
Atu2772 -0.7 -3.0 Invasion protein A compare
Atu1619 -0.7 -2.1 protein-export membrane protein SECG compare
Atu2762 -0.7 -2.4 hypothetical protein compare
Atu0979 -0.7 -3.9 two component sensor kinase compare
Atu4217 -0.7 -0.8 TetR family transcriptional regulator compare
Atu4418 -0.7 -2.6 glutaryl-CoA dehydrogenase compare
Atu0036 -0.7 -1.4 hypothetical protein compare
Atu2045 -0.7 -3.0 HFLK protein compare
Atu3603 -0.7 -1.6 two component response regulator compare
Atu2728 -0.6 -2.1 beta (1-->2) glucan export ATP-binding protein compare
Atu2217 -0.6 -2.8 hypothetical protein compare
Atu3777 -0.6 -4.2 hypothetical protein compare
Atu0566 -0.6 -1.4 hypothetical protein compare
Atu0106 -0.6 -1.8 cold shock protein compare
Atu4889 -0.6 -3.2 hypothetical protein compare
Atu3183 -0.6 -0.7 hypothetical protein compare
Atu3517 -0.6 -2.8 acetyltransferase compare
Atu4214 -0.6 -3.1 cold shock protein compare
Atu2452 -0.6 -1.9 hypothetical protein compare
Atu1327 -0.6 -1.7 NADH-ubiquinone oxidoreductase compare
Atu2113 -0.6 -1.6 N-acetylmuramoyl-L-alanine amidase compare
Atu1714 -0.6 -1.2 exonuclease III compare
Atu3730 -0.6 -1.1 hypothetical protein compare
Atu1439 -0.6 -1.4 hypothetical protein compare
Atu3698 -0.6 -1.7 thioredoxin compare
Atu1364 -0.6 -2.3 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2044 -0.6 -2.7 HFLC protein compare
Atu4711 -0.6 -2.4 two component sensor kinase compare
Atu2640 -0.6 -2.2 hypothetical protein compare
Atu4505 -0.6 -3.5 LacI family transcriptional regulator compare
Atu4567 -0.6 -3.5 ROK family transcriptional regulator compare
Atu0971 -0.6 -2.1 two component sensor kinase compare
Atu1303 -0.6 -4.5 exoribonuclease compare
Atu1645 -0.6 -3.8 ABC transporter, substrate binding protein compare
Atu1667 -0.6 -1.3 hypothetical protein compare
Atu4468 -0.6 -3.0 iron transport ABC transporter permease compare
Atu1457 -0.6 -1.0 hypothetical protein compare
Atu0479 -0.6 -2.9 ABC transporter, substrate binding protein (amino acid) compare
Atu4671 -0.6 -1.0 response regulator compare
Atu1646 -0.6 -2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu0251 -0.6 -3.5 hypothetical protein compare
Atu1495 -0.6 -2.1 hypothetical protein compare
Atu3396 -0.6 -3.5 ABC transporter substrate-binding protein compare
Atu2073 -0.6 -2.3 membrane protein compare
Atu3518 -0.6 -3.3 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu3755 -0.6 -1.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu3121 -0.6 -0.8 cold shock protein compare
Atu1647 -0.5 -3.0 ABC transporter, membrane spanning protein compare
Atu1240 -0.5 -3.7 hypothetical protein compare
Atu0936 -0.5 -2.1 methyltransferase compare
Atu3754 -0.5 -2.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu4897 -0.5 -1.1 hypothetical protein compare
Atu0995 -0.5 -3.1 hypothetical protein compare
Atu0780 -0.5 -3.1 hypothetical protein compare
Atu1077 -0.5 -1.8 DNA repair protein compare
Atu1581 -0.5 -1.4 hypothetical protein compare
Atu0135 -0.5 -2.2 uracil phosphoribosyltransferase compare
Atu1238 -0.5 -3.2 polysaccharide export protein compare
Atu0535 -0.5 -2.5 hypothetical protein compare
Atu0692 -0.5 -2.9 glutathione-regulated potassium-efflux system protein compare
Atu0115 -0.5 -0.7 hypothetical protein compare
Atu1039 -0.5 -1.9 DNA repair protein RecO compare
Atu2808 -0.5 -2.5 cobyric acid synthase compare
Atu0751 -0.5 -1.6 ABC transporter, nucleotide binding/ATPase protein (cobalt) compare
Atu0124 -0.5 -1.9 hypothetical protein compare
Atu3740 -0.5 -3.9 fructose bisphosphate aldolase compare
Atu4050 -0.5 -1.3 UTP-glucose-1-phosphate uridylyltransferase compare
Atu2313 -0.5 -2.8 hypothetical protein compare
Atu1215 -0.5 -3.1 thiosulfate sulfurtransferase compare
Atu2694 -0.5 -0.9 hypothetical protein compare
Atu1325 -0.5 -1.3 acetyltransferase compare
Atu3706 -0.5 -2.6 D-3-phosphoglycerate dehydrogenase compare
Atu1239 -0.5 -3.9 exopolysaccharide production protein compare
Atu2209 -0.5 -2.1 pyrroline-5-carboxylate reductase compare
Atu4887 -0.5 -2.4 hypothetical protein compare
Atu4061 -0.5 -2.0 exopolysaccharide production repressor protein compare
Atu3392 -0.5 -1.8 methyltransferase compare
Atu0480 -0.5 -3.7 polysaccharide biosynthesis protein compare
Atu2304 -0.5 -3.4 bacteroid development protein compare
Atu8188 -0.5 -3.4 hypothetical protein compare
Atu3249 -0.5 -3.0 septum formation inhibitor compare
Atu1566 -0.5 -0.7 hypothetical protein compare
Atu0777 -0.5 -0.7 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment