Experiment set14TCH664 for Pectobacterium carotovorum WPP14

Compare to:

Tuber-Atlantic

200 most detrimental genes:

  gene name fitness t score description  
HER17_RS08090 +4.4 23.1 flagellar motor stator protein MotA compare
HER17_RS08095 +4.1 20.8 flagellar motor protein MotB compare
HER17_RS14575 +3.8 2.4 O-antigen translocase compare
HER17_RS02585 +3.6 9.9 RNA chaperone Hfq compare
HER17_RS07710 +2.6 16.7 UvrY/SirA/GacA family response regulator transcription factor compare
HER17_RS04105 +2.3 16.7 two-component sensor histidine kinase BarA compare
HER17_RS13590 +2.2 6.6 helix-turn-helix domain-containing protein compare
HER17_RS16660 +2.2 11.8 TetR/AcrR family transcriptional regulator compare
HER17_RS08345 +2.1 10.1 class I SAM-dependent methyltransferase compare
HER17_RS08080 +2.0 9.3 flagellar transcriptional regulator FlhD compare
HER17_RS08315 +2.0 16.1 methyltransferase regulatory domain-containing protein compare
HER17_RS09270 +1.9 11.9 transcriptional regulator SlyA compare
HER17_RS08320 +1.9 10.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
HER17_RS08085 +1.9 11.9 flagellar transcriptional regulator FlhC compare
HER17_RS04320 +1.6 2.7 cell division protein FtsB compare
HER17_RS11460 +1.6 1.4 osmotically-inducible lipoprotein OsmE compare
HER17_RS19810 +1.6 8.2 3',5'-cyclic-AMP phosphodiesterase compare
HER17_RS18035 +1.5 9.4 acetolactate synthase AlsS compare
HER17_RS05845 +1.5 8.0 cyclic-guanylate-specific phosphodiesterase compare
HER17_RS18045 +1.5 8.8 LysR family transcriptional regulator compare
HER17_RS19105 +1.5 6.6 cell division protein ZapA compare
HER17_RS09030 +1.4 2.6 cytochrome c biogenesis heme-transporting ATPase CcmA compare
HER17_RS14525 +1.4 8.7 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
HER17_RS18150 +1.3 8.7 N-acetyltransferase compare
HER17_RS01995 +1.3 7.0 two-component system sensor histidine kinase PmrB compare
HER17_RS14540 +1.3 7.1 GDP-mannose 4,6-dehydratase compare
HER17_RS09275 +1.2 2.3 glycine zipper 2TM domain-containing protein compare
HER17_RS19565 +1.2 1.3 type I-E CRISPR-associated endoribonuclease Cas2e compare
HER17_RS21525 +1.2 9.2 ribose operon transcriptional repressor RbsR compare
HER17_RS03615 +1.1 1.9 Hcp family type VI secretion system effector compare
HER17_RS12630 +1.1 1.5 hypothetical protein compare
HER17_RS00480 +1.1 6.9 permease-like cell division protein FtsX compare
HER17_RS07680 +1.1 1.5 LysR family transcriptional regulator compare
HER17_RS11360 +1.1 2.0 DUF2627 domain-containing protein compare
HER17_RS13505 +1.1 6.8 glutathione ABC transporter substrate-binding protein GsiB compare
HER17_RS13170 +1.1 1.7 hypothetical protein compare
HER17_RS07565 +1.1 1.8 site-specific integrase compare
HER17_RS12320 +1.0 5.6 DUF917 domain-containing protein compare
HER17_RS09265 +1.0 2.7 DUF1289 domain-containing protein compare
HER17_RS00475 +1.0 3.3 cell division ATP-binding protein FtsE compare
HER17_RS11920 +1.0 1.9 YceH family protein compare
HER17_RS00905 +1.0 1.2 met regulon transcriptional regulator MetJ compare
HER17_RS20735 +1.0 2.8 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
HER17_RS02645 +1.0 6.6 deoxyribonuclease I compare
HER17_RS15940 +1.0 1.8 phosphatidylglycerophosphatase A compare
HER17_RS07745 +1.0 1.7 phage late control D family protein compare
HER17_RS12315 +1.0 5.6 hydantoinase/oxoprolinase family protein compare
HER17_RS14580 +1.0 1.6 DegT/DnrJ/EryC1/StrS family aminotransferase compare
HER17_RS07675 +0.9 2.0 hypothetical protein compare
HER17_RS00855 +0.9 2.6 ATP-dependent protease subunit HslV compare
HER17_RS16975 +0.9 4.8 PAS and helix-turn-helix domain-containing protein compare
HER17_RS00860 +0.9 5.2 cell division protein FtsN compare
HER17_RS12690 +0.9 1.6 hypothetical protein compare
HER17_RS14545 +0.9 1.7 glycosyltransferase compare
HER17_RS19875 +0.9 3.6 DnaA initiator-associating protein DiaA compare
HER17_RS01405 +0.9 1.5 homoserine/homoserine lactone efflux protein compare
HER17_RS18440 +0.9 1.3 phage tail protein compare
HER17_RS01055 +0.9 2.9 ilv operon leader peptide compare
HER17_RS14535 +0.8 3.1 GDP-L-fucose synthase compare
HER17_RS21530 +0.8 6.2 ribokinase compare
HER17_RS10085 +0.8 1.7 type III secretion lipoprotein compare
HER17_RS08360 +0.8 4.8 flagella biosynthesis regulatory protein FliZ compare
HER17_RS04860 +0.8 2.9 type VI secretion system baseplate subunit TssG compare
HER17_RS02360 +0.8 0.9 entericidin A/B family lipoprotein compare
HER17_RS10590 +0.8 1.9 cellulase compare
HER17_RS14520 +0.8 1.7 glycosyltransferase compare
HER17_RS08065 +0.8 1.8 protein DsrB compare
HER17_RS04745 +0.8 2.0 AlpA family transcriptional regulator compare
HER17_RS20750 +0.8 4.7 murein hydrolase activator EnvC compare
HER17_RS03605 +0.8 1.8 DUF1240 domain-containing protein compare
HER17_RS18365 +0.8 2.4 putative DNA-binding transcriptional regulator compare
HER17_RS15885 +0.8 1.4 cytochrome o ubiquinol oxidase subunit III compare
HER17_RS11590 +0.7 1.7 DNA-binding protein compare
HER17_RS03115 +0.7 1.5 division/cell wall cluster transcriptional repressor MraZ compare
HER17_RS04535 +0.7 1.8 MurR/RpiR family transcriptional regulator compare
HER17_RS21860 +0.7 2.2 hypothetical protein compare
HER17_RS19725 +0.7 4.6 cell division protein FtsP compare
HER17_RS09725 +0.7 2.6 hypothetical protein compare
HER17_RS16615 +0.7 1.1 YggL family protein compare
HER17_RS12620 +0.7 1.2 IS3 family transposase compare
HER17_RS11820 +0.7 1.6 LacI family transcriptional regulator compare
HER17_RS10170 +0.7 1.3 hypothetical protein compare
HER17_RS17465 +0.7 2.1 hypothetical protein compare
HER17_RS19750 +0.7 1.0 DUF2314 domain-containing protein compare
HER17_RS10910 +0.7 1.2 PHP domain-containing protein compare
HER17_RS10360 +0.7 1.8 histidinol-phosphatase compare
HER17_RS03980 +0.7 4.9 autotransporter assembly complex protein TamA compare
HER17_RS09955 +0.6 4.1 M20 family metallopeptidase compare
HER17_RS06255 +0.6 2.6 NAD(P)-dependent alcohol dehydrogenase compare
HER17_RS13595 +0.6 1.4 helix-turn-helix domain-containing protein compare
HER17_RS19720 +0.6 2.9 GntR family transcriptional regulator compare
HER17_RS14890 +0.6 1.7 cyd operon protein YbgE compare
HER17_RS05830 +0.6 1.0 pyridoxine 5'-phosphate synthase compare
HER17_RS09600 +0.6 1.0 hypothetical protein compare
HER17_RS05035 +0.6 1.8 hypothetical protein compare
HER17_RS07805 +0.6 0.6 GPW/gp25 family protein compare
HER17_RS19870 +0.6 2.4 YraN family protein compare
HER17_RS11320 +0.6 2.3 TerC family protein compare
HER17_RS14775 +0.6 2.7 hypothetical protein compare
HER17_RS11580 +0.6 1.8 hypothetical protein compare
HER17_RS02730 +0.6 2.9 zinc-binding alcohol dehydrogenase family protein compare
HER17_RS09305 +0.6 4.2 glutathione transferase GstA compare
HER17_RS18665 +0.6 1.7 ATP-independent periplasmic protein-refolding chaperone Spy compare
HER17_RS07370 +0.6 2.2 ABC transporter permease compare
HER17_RS10165 +0.6 1.6 hypothetical protein compare
HER17_RS13640 +0.6 2.8 DUF1330 domain-containing protein compare
HER17_RS18500 +0.6 2.7 phage tail protein compare
HER17_RS15280 +0.6 2.7 Sec-independent protein translocase subunit TatA compare
HER17_RS16980 +0.6 3.3 cytosine permease compare
HER17_RS18390 +0.6 2.0 malate dehydrogenase compare
HER17_RS07645 +0.6 1.8 hypothetical protein compare
HER17_RS18940 +0.6 1.9 putative phosphonate metabolism protein compare
HER17_RS13265 +0.6 2.3 hypothetical protein compare
HER17_RS11335 +0.6 2.7 PTS mannose transporter subunit IID compare
HER17_RS16970 +0.6 1.4 LysR family transcriptional regulator compare
HER17_RS01780 +0.6 1.3 3-dehydroquinate synthase compare
HER17_RS03985 +0.6 4.6 translocation/assembly module TamB compare
HER17_RS18040 +0.5 3.7 acetolactate decarboxylase compare
HER17_RS00460 +0.5 1.4 DUF1145 family protein compare
HER17_RS04115 +0.5 4.0 GTP diphosphokinase compare
HER17_RS08390 +0.5 2.2 betaine-aldehyde dehydrogenase compare
HER17_RS13115 +0.5 1.6 GPW/gp25 family protein compare
HER17_RS21045 +0.5 1.7 LuxR family transcriptional regulator compare
HER17_RS07105 +0.5 2.7 SLC13 family permease compare
HER17_RS13160 +0.5 1.9 phage major tail tube protein compare
HER17_RS12110 +0.5 1.2 DUF496 family protein compare
HER17_RS09285 +0.5 1.4 MliC family protein compare
HER17_RS08270 +0.5 1.8 flagellar assembly protein FliH compare
HER17_RS07920 +0.5 0.6 replication protein B compare
HER17_RS12800 +0.5 1.8 glutathione S-transferase compare
HER17_RS02660 +0.5 2.6 hypothetical protein compare
HER17_RS11200 +0.5 1.1 ATPase AAA compare
HER17_RS14260 +0.5 1.9 ABC transporter substrate-binding protein compare
HER17_RS05275 +0.5 1.1 hypothetical protein compare
HER17_RS15075 +0.5 1.6 LexA regulated protein compare
HER17_RS14570 +0.5 0.9 glycosyltransferase compare
HER17_RS03025 +0.5 1.9 thiamine ABC transporter ATP-binding protein ThiQ compare
HER17_RS05460 +0.5 2.3 class I SAM-dependent methyltransferase compare
HER17_RS13335 +0.5 1.8 ABC transporter ATP-binding protein compare
HER17_RS08190 +0.5 2.6 flagellar basal-body rod protein FlgG compare
HER17_RS02755 +0.5 2.7 trp operon repressor compare
HER17_RS18435 +0.5 0.8 phage late control D family protein compare
HER17_RS12775 +0.5 3.0 methyl-accepting chemotaxis protein compare
HER17_RS18670 +0.5 1.8 hypothetical protein compare
HER17_RS20620 +0.5 2.2 argininosuccinate lyase compare
HER17_RS20535 +0.5 1.6 Trk system potassium transporter TrkH compare
HER17_RS14780 +0.5 1.1 copper-binding protein compare
HER17_RS00680 +0.5 0.6 type II toxin-antitoxin system HicB family antitoxin compare
HER17_RS06025 +0.5 2.2 iron-sulfur cluster assembly protein IscA compare
HER17_RS21155 +0.5 2.6 sulfite exporter TauE/SafE family protein compare
HER17_RS11545 +0.5 1.2 protease HtpX compare
HER17_RS05580 +0.5 0.8 RNA polymerase-binding protein DksA compare
HER17_RS19865 +0.5 3.5 penicillin-binding protein activator compare
HER17_RS20070 +0.5 1.5 PTS IIA-like nitrogen regulatory protein PtsN compare
HER17_RS10070 +0.5 1.3 type III secretion protein HrpF compare
HER17_RS08310 +0.5 2.1 flagellin FliC compare
HER17_RS11220 +0.5 2.2 sodium/proton antiporter NhaB compare
HER17_RS11900 +0.5 1.1 VOC family protein compare
HER17_RS00075 +0.5 1.8 pesticin C-terminus-like muramidase compare
HER17_RS05490 +0.5 1.2 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI compare
HER17_RS06235 +0.5 1.0 VOC family protein compare
HER17_RS15370 +0.5 2.2 energy transducer TonB compare
HER17_RS08860 +0.5 1.6 iron ABC transporter permease compare
HER17_RS14315 +0.5 1.3 TetR/AcrR family transcriptional regulator compare
HER17_RS14025 +0.5 1.6 AraC family transcriptional regulator compare
HER17_RS19050 +0.5 1.1 stress response protein compare
HER17_RS04545 +0.5 1.7 amino acid ABC transporter permease compare
HER17_RS12910 +0.4 1.4 glutathione binding-like protein compare
HER17_RS10410 +0.4 2.1 membrane protein compare
HER17_RS01465 +0.4 1.1 YhgN family NAAT transporter compare
HER17_RS04845 +0.4 2.8 type VI secretion system contractile sheath large subunit compare
HER17_RS12550 +0.4 2.0 ABC transporter permease compare
HER17_RS01090 +0.4 2.1 hypothetical protein compare
HER17_RS01945 +0.4 3.2 ABC transporter ATP-binding protein compare
HER17_RS18585 +0.4 0.6 DUF5405 family protein compare
HER17_RS20230 +0.4 1.8 carbonic anhydrase compare
HER17_RS12200 +0.4 2.5 response regulator compare
HER17_RS06660 +0.4 1.3 type II secretion system pilot lipoprotein GspS compare
HER17_RS05305 +0.4 1.0 TraR/DksA family transcriptional regulator compare
HER17_RS14515 +0.4 2.5 phosphomannomutase CpsG compare
HER17_RS14820 +0.4 2.3 quinolinate synthase NadA compare
HER17_RS11815 +0.4 2.4 zinc ABC transporter permease subunit ZnuB compare
HER17_RS03380 +0.4 1.5 PTS sugar transporter subunit IIB compare
HER17_RS10725 +0.4 2.7 MFS transporter compare
HER17_RS13185 +0.4 1.8 hypothetical protein compare
HER17_RS04885 +0.4 2.3 type VI secretion system ATPase TssH compare
HER17_RS11445 +0.4 1.8 alpha/beta hydrolase compare
HER17_RS16080 +0.4 1.9 ADP-ribosylglycohydrolase family protein compare
HER17_RS12900 +0.4 2.1 LysR substrate-binding domain-containing protein compare
HER17_RS06130 +0.4 1.7 cupin domain-containing protein compare
HER17_RS02665 +0.4 3.4 biosynthetic arginine decarboxylase compare
HER17_RS15460 +0.4 1.6 uracil phosphoribosyltransferase compare
HER17_RS01295 +0.4 1.9 GntR family transcriptional regulator compare
HER17_RS07905 +0.4 0.9 TraR/DksA family transcriptional regulator compare
HER17_RS12590 +0.4 1.3 hypothetical protein compare
HER17_RS08500 +0.4 1.6 isochorismatase family protein compare
HER17_RS01540 +0.4 3.3 4-alpha-glucanotransferase compare
HER17_RS17545 +0.4 2.5 transporter substrate-binding domain-containing protein compare
HER17_RS11980 +0.4 1.8 membrane integrity-associated transporter subunit PqiA compare
HER17_RS01975 +0.4 2.3 FKBP-type peptidyl-prolyl cis-trans isomerase compare


Specific Phenotypes

For 8 genes in this experiment