| | gene | name | fitness | t score | description | |
|---|
| b0851 | nfsA | +6.3 | 22.0 | nitroreductase A, NADPH-dependent, FMN-dependent (NCBI) | compare |
| b1531 | marA | +4.4 | 7.7 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b0464 | acrR | +3.5 | 24.1 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0912 | ihfB | +3.1 | 9.8 | integration host factor subunit beta (NCBI) | compare |
| b1217 | chaB | +3.0 | 2.0 | cation transport regulator (NCBI) | compare |
| b2689 | yqaA | +3.0 | 4.3 | conserved inner membrane protein (NCBI) | compare |
| b0578 | nfnB | +2.7 | 15.8 | dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive (NCBI) | compare |
| b0850 | ybjC | +2.3 | 1.3 | predicted inner membrane protein (NCBI) | compare |
| b1530 | marR | +2.3 | 2.5 | multiple antibiotic resistance protein; repressor of mar operon (VIMSS) | compare |
| b0852 | rimK | +2.2 | 4.2 | ribosomal protein S6 modification protein (NCBI) | compare |
| b0606 | ahpF | +2.0 | 11.9 | alkyl hydroperoxide reductase, F52a subunit; detoxification of hydroperoxides (VIMSS) | compare |
| b2642 | yfjW | +1.9 | 1.2 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b0605 | ahpC | +1.8 | 4.5 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1429 | tehA | +1.8 | 1.1 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b3979 | thrT | +1.8 | 1.0 | tRNA-Thr (NCBI) | compare |
| b4402 | yjjY | +1.8 | 1.9 | hypothetical protein (NCBI) | compare |
| b0014 | dnaK | +1.6 | 2.5 | molecular chaperone DnaK (NCBI) | compare |
| b3405 | ompR | +1.6 | 6.8 | osmolarity response regulator (NCBI) | compare |
| b1160 | elbA | +1.6 | 1.4 | hypothetical protein (NCBI) | compare |
| b2444 | yffM | +1.6 | 2.3 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0059 | hepA | +1.5 | 12.0 | ATP-dependent helicase HepA (NCBI) | compare |
| b0247 | ykfG | +1.5 | 2.0 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b4313 | fimE | +1.5 | 9.2 | tyrosine recombinase/inversion of on/off regulator of fimA (NCBI) | compare |
| b2215 | ompC | +1.4 | 8.7 | outer membrane porin protein C (NCBI) | compare |
| b4407 | thiS | +1.3 | 2.1 | sulfur carrier protein ThiS (NCBI) | compare |
| b2480 | bcp | +1.3 | 5.3 | thioredoxin-dependent thiol peroxidase (NCBI) | compare |
| b1013 | ycdC | +1.3 | 2.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1553 | ydfP | +1.3 | 2.1 | Qin prophage; conserved protein (NCBI) | compare |
| b0623 | cspE | +1.3 | 2.5 | cold shock protein E (NCBI) | compare |
| b3404 | envZ | +1.3 | 8.0 | osmolarity sensor protein (NCBI) | compare |
| b3780 | rhlB | +1.2 | 9.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b3812 | yigB | +1.2 | 5.9 | predicted hydrolase (NCBI) | compare |
| b4416 | rybA | +1.2 | 1.3 | unknown RNA (NCBI) | compare |
| b1946 | fliN | +1.2 | 3.0 | flagellar motor switch protein (NCBI) | compare |
| b1831 | proQ | +1.2 | 2.5 | putative solute/DNA competence effector (NCBI) | compare |
| b2421 | cysM | +1.2 | 3.8 | cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) | compare |
| b0927 | ycbL | +1.2 | 2.8 | predicted metal-binding enzyme (NCBI) | compare |
| b2804 | fucU | +1.2 | 2.1 | L-fucose mutarotase (NCBI) | compare |
| b2029 | gnd | +1.1 | 6.1 | 6-phosphogluconate dehydrogenase (NCBI) | compare |
| b1656 | sodB | +1.1 | 1.9 | superoxide dismutase, Fe (NCBI) | compare |
| b0127 | yadG | +1.1 | 5.0 | predicted transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1138 | ymfE | +1.1 | 2.0 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b2783 | chpR | +1.1 | 2.2 | antitoxin of the ChpA-ChpR toxin-antitoxin system (NCBI) | compare |
| b3493 | pitA | +1.1 | 6.1 | phosphate transporter, low-affinity (NCBI) | compare |
| b2582 | trxC | +1.1 | 2.3 | thioredoxin 2 (NCBI) | compare |
| b1882 | cheY | +1.1 | 0.6 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b2392 | mntH | +1.0 | 6.0 | manganese transport protein MntH (NCBI) | compare |
| b1153 | ymfQ | +1.0 | 3.2 | e14 prophage; conserved protein (NCBI) | compare |
| b2209 | eco | +1.0 | 1.7 | ecotin precursor (NCBI) | compare |
| b2446 | yffO | +1.0 | 1.8 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b1778 | yeaA | +1.0 | 1.8 | methionine sulfoxide reductase B (NCBI) | compare |
| b4461 | yfjD | +1.0 | 5.7 | predicted inner membrane protein (RefSeq) | compare |
| b4699 | fnrS | +1.0 | 0.9 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b1907 | tyrP | +1.0 | 3.4 | tyrosine transporter (NCBI) | compare |
| b0888 | trxB | +1.0 | 2.6 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b1818 | manY | +0.9 | 1.2 | mannose-specific enzyme IIC component of PTS (NCBI) | compare |
| b1824 | yobF | +0.9 | 2.0 | hypothetical protein (NCBI) | compare |
| b1567 | intK | +0.9 | 1.2 | Qin prophage; predicted protein (RefSeq) | compare |
| b4041 | plsB | +0.9 | 1.9 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b1558 | cspF | +0.9 | 1.1 | Qin prophage; cold shock protein (NCBI) | compare |
| b1607 | ydgC | +0.9 | 1.1 | conserved inner membrane protein associated with alginate biosynthesis (NCBI) | compare |
| b4655 | ythA | +0.9 | 0.9 | expressed protein (RefSeq) | compare |
| b1332 | ynaJ | +0.9 | 0.6 | predicted inner membrane protein (NCBI) | compare |
| b1524 | yneH | +0.9 | 1.0 | predicted glutaminase (NCBI) | compare |
| b2377 | yfdY | +0.9 | 1.7 | predicted inner membrane protein (NCBI) | compare |
| b4589 | ylcI | +0.9 | 1.5 | hypothetical protein (RefSeq) | compare |
| b2635 | ypjK | +0.9 | 2.2 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1253 | yciA | +0.9 | 2.5 | predicted hydrolase (NCBI) | compare |
| b1837 | yebW | +0.9 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2502 | ppx | +0.9 | 4.6 | exopolyphosphatase (NCBI) | compare |
| b2263 | yfbB | +0.9 | 2.1 | predicted peptidase (NCBI) | compare |
| b4396 | rob | +0.9 | 5.7 | DNA-binding transcriptional activator (NCBI) | compare |
| b2198 | ccmD | +0.9 | 1.8 | cytochrome c biogenesis protein (NCBI) | compare |
| b1148 | ymfM | +0.9 | 2.0 | e14 prophage; predicted protein (NCBI) | compare |
| b4515 | ybgT | +0.9 | 1.4 | hypothetical protein (NCBI) | compare |
| b1884 | cheR | +0.9 | 2.1 | chemotaxis regulator, protein-glutamate methyltransferase (NCBI) | compare |
| b3119 | tdcR | +0.9 | 1.8 | threonine dehydratase operon activator protein (VIMSS) | compare |
| b1764 | selD | +0.8 | 2.4 | selenophosphate synthetase (NCBI) | compare |
| b4520 | ymgF | +0.8 | 1.0 | hypothetical protein (NCBI) | compare |
| b0015 | dnaJ | +0.8 | 4.9 | chaperone Hsp40, co-chaperone with DnaK (NCBI) | compare |
| b4521 | ycgI | +0.8 | 2.0 | hypothetical protein (NCBI) | compare |
| b1235 | rssB | +0.8 | 4.2 | response regulator of RpoS (NCBI) | compare |
| b1804 | rnd | +0.8 | 2.5 | ribonuclease D (NCBI) | compare |
| b1753 | ynjA | +0.8 | 1.6 | hypothetical protein (NCBI) | compare |
| b1157 | stfE | +0.8 | 3.3 | no description | compare |
| b3930 | menA | +0.8 | 6.7 | 1,4-dihydroxy-2-naphthoate octaprenyltransferase (NCBI) | compare |
| b1400 | paaY | +0.8 | 1.4 | predicted hexapeptide repeat acetyltransferase (NCBI) | compare |
| b1242 | ychE | +0.8 | 2.2 | predicted inner membrane protein (NCBI) | compare |
| b0826 | moeB | +0.8 | 4.0 | molybdopterin biosynthesis protein MoeB (NCBI) | compare |
| b1312 | ycjP | +0.8 | 3.2 | predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1150 | ymfR | +0.8 | 0.8 | e14 prophage; predicted protein (NCBI) | compare |
| b1823 | cspC | +0.8 | 1.2 | stress protein, member of the CspA-family (NCBI) | compare |
| b2683 | ygaH | +0.8 | 3.5 | predicted inner membrane protein (NCBI) | compare |
| b0937 | ssuE | +0.8 | 1.5 | NAD(P)H-dependent FMN reductase (NCBI) | compare |
| b4551 | yheV | +0.8 | 0.9 | hypothetical protein (NCBI) | compare |
| b1152 | ymfP | +0.8 | 2.7 | orf, hypothetical protein (VIMSS) | compare |
| b0128 | yadH | +0.8 | 4.5 | predicted transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b1141 | ymfG | +0.8 | 2.5 | e14 prophage; predicted excisionase (NCBI) | compare |
| b2398 | yfeC | +0.8 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b1867 | yecD | +0.7 | 2.8 | orf, hypothetical protein (VIMSS) | compare |
| b2622 | intA | +0.7 | 3.7 | CP4-57 prophage; integrase (NCBI) | compare |
| b1446 | ydcY | +0.7 | 1.0 | hypothetical protein (NCBI) | compare |
| b0456 | ybaA | +0.7 | 2.1 | hypothetical protein (NCBI) | compare |
| b1900 | araG | +0.7 | 2.3 | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b1222 | narX | +0.7 | 2.4 | sensory histidine kinase in two-component regulatory system with NarL (NCBI) | compare |
| b0641 | rlpB | +0.7 | 1.4 | minor lipoprotein (NCBI) | compare |
| b0783 | moaC | +0.7 | 2.8 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b1842 | holE | +0.7 | 0.8 | DNA polymerase III, theta subunit (NCBI) | compare |
| b0785 | moaE | +0.7 | 2.8 | molybdopterin synthase, large subunit (NCBI) | compare |
| b1538 | dcp | +0.7 | 2.3 | dipeptidyl carboxypeptidase II (NCBI) | compare |
| b4505 | insX | +0.7 | 1.0 | predicted IS protein (RefSeq) | compare |
| b1963 | b1963 | +0.7 | 1.7 | orf, hypothetical protein (VIMSS) | compare |
| b2913 | serA | +0.7 | 4.1 | D-3-phosphoglycerate dehydrogenase (NCBI) | compare |
| b2938 | speA | +0.7 | 4.2 | arginine decarboxylase (NCBI) | compare |
| b0763 | modA | +0.7 | 2.8 | molybdate transporter subunit (NCBI) | compare |
| b1569 | dicC | +0.7 | 1.6 | Qin prophage; DNA-binding transcriptional regulator for DicB (NCBI) | compare |
| b0473 | htpG | +0.7 | 4.8 | heat shock protein 90 (NCBI) | compare |
| b1184 | umuC | +0.7 | 3.0 | DNA polymerase V subunit UmuC (NCBI) | compare |
| b3293 | yhdN | +0.7 | 2.3 | hypothetical protein (NCBI) | compare |
| b2136 | yohD | +0.7 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1588 | ynfF | +0.7 | 1.6 | oxidoreductase subunit (RefSeq) | compare |
| b1441 | ydcT | +0.7 | 1.9 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b1287 | yciW | +0.7 | 1.7 | putative oxidoreductase (VIMSS) | compare |
| b4387 | ytjB | +0.7 | 2.6 | hypothetical protein (NCBI) | compare |
| b4693 | aaaE | +0.7 | 2.9 | no description | compare |
| b1348 | lar | +0.7 | 0.8 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b0550 | rusA | +0.6 | 1.3 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b1482 | osmC | +0.6 | 0.8 | osmotically inducible, stress-inducible membrane protein (NCBI) | compare |
| b1640 | ydhH | +0.6 | 1.8 | anhydro-N-acetylmuramic acid kinase (NCBI) | compare |
| b2592 | clpB | +0.6 | 4.7 | protein disaggregation chaperone (NCBI) | compare |
| b1158 | pin | +0.6 | 2.9 | e14 prophage; site-specific DNA recombinase (NCBI) | compare |
| b0729 | sucD | +0.6 | 1.5 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b2449 | yffR | +0.6 | 2.0 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b0761 | modE | +0.6 | 3.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1940 | fliH | +0.6 | 2.6 | flagellar biosynthesis; export of flagellar proteins? (VIMSS) | compare |
| b1712 | ihfA | +0.6 | 1.0 | integration host factor subunit alpha (NCBI) | compare |
| b1313 | ycjQ | +0.6 | 2.7 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) | compare |
| b1533 | ydeD | +0.6 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2094 | gatA | +0.6 | 2.4 | galactitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b4552 | yrhC | +0.6 | 0.4 | no description | compare |
| b1434 | ydcN | +0.6 | 1.0 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3068 | ygjF | +0.6 | 1.7 | G/U mismatch-specific DNA glycosylase (NCBI) | compare |
| b4127 | yjdJ | +0.6 | 3.1 | predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) | compare |
| b4675 | yoaJ | +0.6 | 1.6 | expressed protein (RefSeq) | compare |
| b2586 | yfiM | +0.6 | 1.6 | predicted protein (RefSeq) | compare |
| b4595 | yciY | +0.6 | 1.0 | hypothetical protein (RefSeq) | compare |
| b1591 | b1591 | +0.6 | 0.7 | putative oxidoreductase component (VIMSS) | compare |
| b1144 | ymfJ | +0.6 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1246 | oppD | +0.6 | 3.0 | oligopeptide transporter ATP-binding component (NCBI) | compare |
| b1154 | ycfK | +0.6 | 3.3 | e14 prophage; predicted protein (NCBI) | compare |
| b3427 | yzgL | +0.6 | 2.2 | orf, hypothetical protein (VIMSS) | compare |
| b2114 | metG | +0.6 | 1.0 | methionyl-tRNA synthetase (NCBI) | compare |
| b3206 | npr | +0.6 | 2.9 | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) (NCBI) | compare |
| b1675 | ydhZ | +0.6 | 1.7 | hypothetical protein (NCBI) | compare |
| b4695 | ykgT | +0.6 | 0.7 | no description | compare |
| b4613 | dinQ | +0.6 | 1.0 | Damage inducible, function unknown (RefSeq) | compare |
| b4240 | treB | +0.6 | 4.2 | fused trehalose(maltose)-specific PTS enzyme: IIB component/IIC component (NCBI) | compare |
| b0782 | moaB | +0.6 | 1.0 | molybdopterin biosynthesis protein B (NCBI) | compare |
| b3166 | truB | +0.6 | 3.2 | tRNA pseudouridine synthase B (NCBI) | compare |
| b0167 | glnD | +0.6 | 1.5 | PII uridylyl-transferase (NCBI) | compare |
| b0289 | yagV | +0.6 | 1.8 | orf, hypothetical protein (VIMSS) | compare |
| b0644 | ybeQ | +0.6 | 3.3 | orf, hypothetical protein (VIMSS) | compare |
| b1064 | grxB | +0.6 | 2.2 | glutaredoxin 2 (Grx2) (NCBI) | compare |
| b0836 | yliH | +0.6 | 0.9 | hypothetical protein (NCBI) | compare |
| b0781 | moaA | +0.6 | 3.6 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b2183 | rsuA | +0.6 | 1.5 | 16S rRNA pseudouridylate 516 synthase (NCBI) | compare |
| b3672 | ivbL | +0.6 | 1.8 | ilvB operon leader peptide (NCBI) | compare |
| b1419 | ydcA | +0.6 | 1.7 | hypothetical protein (NCBI) | compare |
| b3892 | fdoI | +0.6 | 3.2 | formate dehydrogenase-O, cytochrome b556 subunit (NCBI) | compare |
| b0108 | ppdD | +0.6 | 1.7 | predicted major pilin subunit (NCBI) | compare |
| b1744 | astE | +0.6 | 2.0 | succinylglutamate desuccinylase (NCBI) | compare |
| b1557 | cspB | +0.6 | 0.6 | Qin prophage; cold shock protein (NCBI) | compare |
| b3658 | selC | +0.6 | 1.3 | tRNA-Sec (NCBI) | compare |
| b1359 | ydaU | +0.6 | 1.4 | Rac prophage; conserved protein (NCBI) | compare |
| b3673 | emrD | +0.6 | 3.9 | 2-module integral membrane pump; multidrug resistance (VIMSS) | compare |
| b1781 | yeaE | +0.5 | 2.0 | predicted oxidoreductase (NCBI) | compare |
| b2236 | yfaE | +0.5 | 1.1 | predicted 2Fe-2S cluster-containing protein (NCBI) | compare |
| b4608 | ryfC | +0.5 | 1.5 | Novel sRNA, function unknown (RefSeq) | compare |
| b1120 | cobB | +0.5 | 1.7 | deacetylase of acs and cheY, regulates chemotaxis (NCBI) | compare |
| b3857 | mobA | +0.5 | 1.9 | molybdopterin-guanine dinucleotide biosynthesis protein A (NCBI) | compare |
| b2937 | speB | +0.5 | 2.5 | agmatinase (NCBI) | compare |
| b3366 | nirD | +0.5 | 2.0 | nitrite reductase small subunit (NCBI) | compare |
| b1251 | yciI | +0.5 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b4000 | hupA | +0.5 | 2.0 | HU, DNA-binding transcriptional regulator, alpha subunit (NCBI) | compare |
| b3262 | yhdJ | +0.5 | 2.5 | putative methyltransferase (VIMSS) | compare |
| b2443 | yffL | +0.5 | 2.1 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b1134 | ymfB | +0.5 | 1.0 | bifunctional thiamin pyrimidine pyrophosphate hydrolase/ thiamin pyrophosphate hydrolase (NCBI) | compare |
| b3644 | yicC | +0.5 | 2.6 | hypothetical protein (NCBI) | compare |
| b1511 | ydeV | +0.5 | 1.9 | putative kinase (VIMSS) | compare |
| b3002 | yqhA | +0.5 | 1.0 | hypothetical protein (NCBI) | compare |
| b1958 | yedI | +0.5 | 1.8 | conserved inner membrane protein (NCBI) | compare |
| b1733 | chbG | +0.5 | 1.7 | hypothetical protein (NCBI) | compare |
| b1070 | flgN | +0.5 | 0.7 | export chaperone for FlgK and FlgL (NCBI) | compare |
| b2953 | yggU | +0.5 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b1248 | b1248 | +0.5 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b0846 | ybjK | +0.5 | 1.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1260 | trpA | +0.5 | 1.8 | tryptophan synthase subunit alpha (NCBI) | compare |
| b1542 | ydfI | +0.5 | 1.0 | predicted mannonate dehydrogenase (NCBI) | compare |
| b4570 | lomR | +0.5 | 0.6 | no description | compare |
| b4701 | sokX | +0.5 | 0.3 | sok-related sRNA, function unknown (RefSeq) | compare |