Experiment set14IT058 for Pseudomonas simiae WCS417

Compare to:

Vogels_fungal_media 0.1X

200 most important genes:

  gene name fitness t score description  
PS417_18600 -7.4 -3.7 isopropylmalate isomerase compare
PS417_27040 -6.1 -2.9 3-phosphoglycerate dehydrogenase compare
PS417_20635 -5.1 -1.5 ABC transporter ATP-binding protein compare
PS417_00705 -5.0 -2.5 MarR family transcriptional regulator compare
PS417_23545 -5.0 -4.5 gamma-glutamyl kinase compare
PS417_27795 -4.9 -1.5 orotate phosphoribosyltransferase compare
PS417_24745 -4.8 -6.7 gamma-glutamyl phosphate reductase compare
PS417_08155 -4.6 -2.3 integration host factor subunit beta compare
PS417_22850 -4.6 -11.8 virulence factor family protein compare
PS417_22570 -4.4 -1.3 H-NS histone compare
PS417_23995 -4.3 -1.3 preprotein translocase subunit SecG compare
PS417_05975 -4.3 -1.3 chemotaxis protein CheW compare
PS417_01850 -4.1 -5.5 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
PS417_25710 -4.1 -1.7 indole-3-glycerol-phosphate synthase compare
PS417_18530 -4.0 -5.6 O-succinylhomoserine sulfhydrylase compare
PS417_06245 -4.0 -2.8 zinc metallopeptidase RseP compare
PS417_00180 -3.9 -2.4 tryptophan synthase subunit alpha compare
PS417_23805 -3.9 -4.8 acetolactate synthase 3 regulatory subunit compare
PS417_04420 -3.9 -8.9 histidinol dehydrogenase compare
PS417_18585 -3.9 -6.2 3-isopropylmalate dehydrogenase compare
PS417_24935 -3.8 -1.6 hypothetical protein compare
PS417_04415 -3.8 -7.4 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
PS417_04585 -3.7 -1.8 hypothetical protein compare
PS417_26730 -3.7 -1.5 pyrroline-5-carboxylate reductase compare
PS417_01575 -3.6 -4.7 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
PS417_07170 -3.6 -4.9 hypothetical protein compare
PS417_14065 -3.6 -7.1 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_02005 -3.5 -9.2 glutamate synthase compare
PS417_17215 -3.5 -3.4 peptidylprolyl isomerase compare
PS417_27195 -3.4 -1.4 N-acetylglutamate synthase compare
PS417_16465 -3.3 -10.5 sirohydrochlorin ferrochelatase compare
PS417_23800 -3.3 -9.3 ketol-acid reductoisomerase compare
PS417_12290 -3.2 -6.6 sulfite reductase compare
PS417_01565 -3.1 -5.7 imidazole glycerol phosphate synthase compare
PS417_25725 -3.1 -9.8 anthranilate synthase component I compare
PS417_20785 -3.1 -4.9 transcriptional regulator compare
PS417_08185 -3.1 -4.7 glycosyl transferase compare
PS417_02415 -3.1 -4.4 phosphoserine phosphatase compare
PS417_25715 -3.0 -4.8 anthranilate phosphoribosyltransferase compare
PS417_05595 -3.0 -7.3 ornithine carbamoyltransferase compare
PS417_26740 -3.0 -5.5 homoserine acetyltransferase compare
PS417_18595 -3.0 -4.5 3-isopropylmalate dehydratase compare
PS417_18560 -2.8 -4.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
PS417_00185 -2.8 -3.0 tryptophan synthase subunit beta compare
PS417_20985 -2.7 -1.9 porin compare
PS417_22845 -2.7 -13.4 membrane protein compare
PS417_20130 -2.7 -9.7 dehydrogenase compare
PS417_06530 -2.7 -2.7 membrane protein compare
PS417_08195 -2.7 -8.1 hypothetical protein compare
PS417_08205 -2.7 -4.4 acetyltransferase compare
PS417_12855 -2.7 -4.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_18310 -2.6 -1.9 hypothetical protein compare
PS417_08190 -2.6 -9.2 membrane protein compare
PS417_03260 -2.6 -1.4 5S ribosomal RNA compare
PS417_21510 -2.6 -2.1 histidine kinase compare
PS417_26745 -2.6 -4.8 methionine biosynthesis protein MetW compare
PS417_02000 -2.6 -10.2 glutamate synthase compare
PS417_01095 -2.6 -1.7 amino acid ABC transporter ATP-binding protein compare
PS417_09245 -2.6 -1.8 recombinase RdgC compare
PS417_08245 -2.5 -1.5 CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3- dehydrase reductase compare
PS417_02365 -2.5 -3.5 hypothetical protein compare
PS417_02510 -2.4 -5.6 ATP phosphoribosyltransferase regulatory subunit compare
PS417_25720 -2.4 -5.0 anthranilate synthase component II compare
PS417_09600 -2.4 -4.9 glycosyl transferase family 1 compare
PS417_26995 -2.4 -5.0 phosphoserine phosphatase compare
PS417_01855 -2.4 -3.1 phosphoribosyl-AMP cyclohydrolase compare
PS417_23810 -2.3 -7.3 acetolactate synthase 3 catalytic subunit compare
PS417_13820 -2.3 -6.4 UDP-glucose 6-dehydrogenase compare
PS417_26890 -2.3 -4.9 dihydroxy-acid dehydratase compare
PS417_16715 -2.3 -1.1 DoxX family protein compare
PS417_09590 -2.3 -4.2 membrane protein compare
PS417_08225 -2.3 -3.0 acetolactate synthase compare
PS417_23110 -2.3 -5.7 2-isopropylmalate synthase compare
PS417_27245 -2.2 -4.6 aminotransferase DegT compare
PS417_20650 -2.2 -6.1 hypothetical protein compare
PS417_09625 -2.2 -2.2 sugar ABC transporter substrate-binding protein compare
PS417_18105 -2.2 -1.7 iron-dicitrate transporter substrate-binding subunit compare
PS417_02280 -2.2 -2.2 GlcNAc-PI de-N-acetylase compare
PS417_21480 -2.1 -1.7 23S rRNA pseudouridylate synthase compare
PS417_19425 -2.1 -1.1 allantoicase compare
PS417_20855 -2.1 -1.4 hypothetical protein compare
PS417_13795 -2.1 -5.7 UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
PS417_27435 -2.1 -5.2 polyphosphate kinase compare
PS417_26985 -2.0 -6.4 phosphoenolpyruvate-protein phosphotransferase compare
PS417_27870 -2.0 -3.6 ATP-dependent DNA helicase RecG compare
PS417_24710 -2.0 -5.1 lipoprotein compare
PS417_27315 -1.9 -0.9 hypothetical protein compare
PS417_27585 -1.9 -2.1 diaminopimelate epimerase compare
PS417_08230 -1.9 -1.8 lipopolysaccharide biosynthesis protein RfbH compare
PS417_25780 -1.9 -3.8 molecular chaperone DnaJ compare
PS417_18425 -1.9 -1.9 sporulation protein compare
PS417_04590 -1.9 -4.8 methyltransferase compare
PS417_16855 -1.9 -2.0 cation:proton antiporter compare
PS417_27800 -1.9 -2.8 exodeoxyribonuclease III compare
PS417_09045 -1.8 -2.5 histidine kinase compare
PS417_11705 -1.8 -5.2 cyclic peptide transporter compare
PS417_21125 -1.8 -3.2 phosphoadenosine phosphosulfate reductase compare
PS417_16490 -1.8 -1.4 cell division protein FtsK compare
PS417_15105 -1.8 -5.1 membrane protein compare
PS417_01955 -1.7 -6.4 peptidase compare
PS417_03925 -1.7 -3.7 nicotinate-nucleotide pyrophosphorylase compare
PS417_06025 -1.7 -2.7 alpha/beta hydrolase compare
PS417_05515 -1.7 -5.5 hypothetical protein compare
PS417_04915 -1.7 -1.8 glutamine ABC transporter ATP-binding protein compare
PS417_24840 -1.7 -1.6 hypothetical protein compare
PS417_20160 -1.7 -3.2 cysteine synthase compare
PS417_08335 -1.7 -2.2 hypothetical protein compare
PS417_21015 -1.7 -1.5 EstX protein compare
PS417_08685 -1.6 -1.8 flagellar hook-length control protein FliK compare
PS417_13805 -1.6 -4.8 4-amino-4-deoxy-L-arabinose transferase compare
PS417_06375 -1.6 -0.9 deoxycytidine triphosphate deaminase compare
PS417_27835 -1.6 -5.7 endoribonuclease compare
PS417_03455 -1.6 -1.7 type III secretion protein compare
PS417_01570 -1.5 -2.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
PS417_08200 -1.5 -3.0 hypothetical protein compare
PS417_07615 -1.5 -4.3 TetR family transcriptional regulator compare
PS417_13205 -1.5 -1.2 isochorismate-pyruvate lyase compare
PS417_25220 -1.5 -4.5 iron-hydroxamate ABC transporter substrate-binding protein compare
PS417_04275 -1.5 -8.5 hypothetical protein compare
PS417_13790 -1.5 -2.1 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
PS417_23135 -1.5 -1.7 GTP-binding protein compare
PS417_02270 -1.5 -3.8 carbamoyltransferase compare
PS417_23095 -1.5 -0.9 exodeoxyribonuclease compare
PS417_04375 -1.5 -1.7 ABC transporter ATP-binding protein compare
PS417_07595 -1.4 -2.4 PasA protein compare
PS417_09595 -1.4 -2.9 membrane protein compare
PS417_05570 -1.4 -4.4 DeoR faimly transcriptional regulator compare
PS417_07710 -1.4 -4.2 membrane protein compare
PS417_22385 -1.4 -6.3 quinolinate synthase A compare
PS417_24225 -1.4 -1.6 hypothetical protein compare
PS417_06635 -1.4 -1.1 ferredoxin compare
PS417_06710 -1.4 -1.4 beta-ketoadipyl CoA thiolase compare
PS417_06500 -1.4 -1.1 hypothetical protein compare
PS417_08135 -1.4 -2.5 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_22450 -1.4 -1.2 ATP-dependent DNA helicase RuvA compare
PS417_19605 -1.4 -1.2 hypothetical protein compare
PS417_27785 -1.4 -4.5 phosphoglucomutase compare
PS417_11825 -1.4 -1.6 transcriptional regulator compare
PS417_22445 -1.4 -3.5 ATP-dependent DNA helicase RuvB compare
PS417_01605 -1.4 -1.1 phosphoglycerate mutase compare
PS417_00490 -1.4 -3.6 iron ABC transporter ATP-binding protein compare
PS417_13800 -1.4 -1.8 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase compare
PS417_27135 -1.3 -0.7 glutamine synthetase compare
PS417_20660 -1.3 -5.3 hypothetical protein compare
PS417_05455 -1.3 -3.6 XRE family transcriptional regulator compare
PS417_14655 -1.3 -1.1 lysine transporter LysE compare
PS417_02485 -1.3 -2.7 tRNA delta(2)-isopentenylpyrophosphate transferase compare
PS417_24125 -1.3 -2.4 hypothetical protein compare
PS417_13455 -1.3 -2.0 alkaline proteinase inhibitor compare
PS417_15085 -1.3 -3.0 ATPase AAA compare
PS417_04390 -1.3 -1.8 toluene tolerance protein compare
PS417_23915 -1.3 -2.8 pantoate--beta-alanine ligase compare
PS417_21670 -1.3 -2.8 6,7-dimethyl-8-ribityllumazine synthase compare
PS417_01560 -1.3 -1.5 imidazoleglycerol-phosphate dehydratase compare
PS417_18545 -1.3 -2.7 cell division protein compare
PS417_24800 -1.2 -4.3 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PS417_21430 -1.2 -1.5 3-oxoacyl-ACP synthase compare
PS417_05100 -1.2 -1.6 RNA polymerase sigma factor compare
PS417_15705 -1.2 -1.8 nitrate reductase compare
PS417_20125 -1.2 -1.2 phosphoribosylglycinamide formyltransferase compare
PS417_01580 -1.2 -1.3 imidazole glycerol phosphate synthase compare
PS417_21705 -1.2 -2.3 arginine N-succinyltransferase compare
PS417_07115 -1.2 -6.3 L-aspartate oxidase compare
PS417_25645 -1.2 -3.2 peptidase M23 compare
PS417_01300 -1.2 -2.1 thioesterase compare
PS417_13825 -1.2 -5.1 glycosyltransferase compare
PS417_09615 -1.2 -1.9 glycosyl transferase family 1 compare
PS417_19675 -1.2 -2.5 chemotaxis protein CheY compare
PS417_04385 -1.2 -2.2 organic solvent ABC transporter substrate-binding protein compare
PS417_08580 -1.2 -3.6 histidine kinase compare
PS417_16790 -1.2 -2.2 ABC transporter permease compare
PS417_21990 -1.1 -1.4 LacI family transcriptional regulator compare
PS417_20645 -1.1 -4.8 membrane protein compare
PS417_04485 -1.1 -3.3 hypothetical protein compare
PS417_21035 -1.1 -4.3 multidrug transporter compare
PS417_09585 -1.1 -3.8 acetyltransferase compare
PS417_23490 -1.1 -0.9 dihydrofolate reductase compare
PS417_23670 -1.1 -2.6 Muconate cycloisomerase (EC 5.5.1.1) (from data) compare
PS417_04800 -1.1 -1.6 alginate O-acetyltransferase compare
PS417_02630 -1.1 -1.8 NAD synthetase compare
PS417_17995 -1.1 -2.4 hypothetical protein compare
PS417_21515 -1.1 -3.8 transcriptional regulator compare
PS417_04835 -1.1 -2.7 hemolysin D compare
PS417_23210 -1.1 -1.5 serine acetyltransferase compare
PS417_23380 -1.1 -1.6 cytochrome o ubiquinol oxidase subunit III compare
PS417_23170 -1.1 -0.9 FeS assembly protein IscX compare
PS417_24310 -1.1 -2.5 ankyrin compare
PS417_15095 -1.1 -1.8 hypothetical protein compare
PS417_02210 -1.1 -4.0 diguanylate cyclase compare
PS417_13710 -1.1 -1.5 hypothetical protein compare
PS417_00445 -1.1 -5.2 histidine kinase compare
PS417_00880 -1.0 -2.8 hypothetical protein compare
PS417_01645 -1.0 -1.8 cupin compare
PS417_02915 -1.0 -2.4 precorrin-3B C17-methyltransferase compare
PS417_02885 -1.0 -2.3 hypothetical protein compare
PS417_02560 -1.0 -1.4 23S rRNA methyltransferase compare
PS417_12310 -1.0 -3.5 methionine synthase compare
PS417_15035 -1.0 -1.1 alkylhydroperoxidase compare
PS417_01635 -1.0 -3.1 nitrogen regulation protein NR(I) compare
PS417_22270 -1.0 -1.6 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment