Experiment set14IT058 for Pseudomonas simiae WCS417

200 most detrimental genes:

gene	name	fitness	t score	description
PS417_24370		+2.1	2.4	(2Fe-2S)-binding protein
PS417_27300		+1.9	2.1	cell division protein ZapA
PS417_03560		+1.8	1.8	GTP-binding protein
PS417_02255		+1.7	6.0	lipopolysaccharide kinase
PS417_19825		+1.7	7.9	ATPase AAA
PS417_26850		+1.6	1.5	twin-arginine translocation pathway signal protein
PS417_06540		+1.5	3.2	membrane protein
PS417_07870		+1.5	3.2	hypothetical protein
PS417_24615		+1.4	1.3	hypothetical protein
PS417_27875		+1.4	6.8	histidine kinase
PS417_19885		+1.3	4.6	flagellar basal body rod protein FlgG
PS417_19695		+1.3	8.9	flagellar biosynthesis sigma factor
PS417_21585		+1.3	8.3	flagellar basal body P-ring biosynthesis protein FlgA
PS417_08125		+1.3	0.8	prephenate dehydratase
PS417_15215		+1.3	2.5	protein activator of alkane oxidation PraA
PS417_03450		+1.3	2.9	RNA polymerase sigma factor
PS417_21565		+1.3	5.6	flagellar basal body rod protein FlgC
PS417_07875		+1.2	1.3	hypothetical protein
PS417_02805		+1.2	1.7	urease subunit gamma
PS417_15650		+1.2	2.2	glutamine amidotransferase
PS417_07560		+1.2	1.5	universal stress protein UspA
PS417_17675		+1.2	2.2	ABC transporter
PS417_27490		+1.2	2.9	hypothetical protein
PS417_21555		+1.2	7.3	flagellar hook protein FlgE
PS417_10040		+1.2	1.4	MFS transporter
PS417_10810		+1.2	2.1	hypothetical protein
PS417_03200		+1.1	3.0	ArsR family transcriptional regulator
PS417_18250		+1.1	1.7	chemotaxis protein
PS417_19785		+1.1	2.5	flagellar biogenesis protein
PS417_01945		+1.1	2.1	nuclease
PS417_05535		+1.1	2.2	Fis family transcriptional regulator
PS417_00385		+1.1	1.2	Fur family transcriptional regulator
PS417_06865		+1.1	1.4	transporter
PS417_27065		+1.1	3.6	hypothetical protein
PS417_19740		+1.0	3.7	flagellar biosynthesis protein flip
PS417_19865		+1.0	6.7	flagellar hook protein FlgK
PS417_19795		+1.0	7.0	flagellar assembly protein FliH
PS417_22565		+1.0	0.9	formyltetrahydrofolate deformylase
PS417_12520		+1.0	1.6	hypothetical protein
PS417_22015		+1.0	1.5	hypothetical protein
PS417_04080		+1.0	2.7	peptide ABC transporter substrate-binding protein
PS417_19095		+1.0	1.4	hypothetical protein
PS417_03465		+1.0	1.2	type III secretion protein
PS417_08620		+1.0	1.1	hypothetical protein
PS417_03940		+1.0	4.3	membrane protein
PS417_16320		+1.0	3.3	protein tyrosine phosphatase
PS417_26445		+1.0	1.6	ArsR family transcriptional regulator
PS417_11410		+0.9	1.6	phospholipase
PS417_07240		+0.9	1.6	Transcriptional regulator of deoxyribose catabolism (from data)
PS417_02440		+0.9	2.6	flagellar motor protein MotB
PS417_03030		+0.9	2.7	pyrophosphatase
PS417_19880		+0.9	3.5	flagellar basal body L-ring protein
PS417_26155		+0.9	2.8	hypothetical protein
PS417_25700		+0.9	1.7	cyclic AMP receptor protein
PS417_09930		+0.9	1.0	hypothetical protein
PS417_28450		+0.9	2.2	XRE family transcriptional regulator
PS417_11400		+0.9	1.2	phosphoglycerate mutase
PS417_07865		+0.9	1.5	hypothetical protein
PS417_17855		+0.9	2.9	major facilitator transporter
PS417_10025		+0.9	1.4	bacteriophage lambda NinG family protein
PS417_01415		+0.9	5.6	glycosyl transferase family 1
PS417_01405		+0.9	2.1	sugar transporter
PS417_22765		+0.9	2.9	InaA protein
PS417_23775		+0.9	1.0	exodeoxyribonuclease V subunit beta
PS417_22115		+0.9	2.6	transcriptional regulator
PS417_10825		+0.9	4.3	glycine/betaine ABC transporter substrate-binding protein
PS417_21570		+0.9	3.9	flagellar basal body rod protein FlgB
PS417_17705		+0.9	1.9	LacI family transcriptional regulator
PS417_11585		+0.9	1.2	LuxR family transcriptional regulator
PS417_19710		+0.8	5.6	flagellar biosynthesis protein FlhA
PS417_21695		+0.8	1.2	succinylglutamate-semialdehyde dehydrogenase
PS417_08320		+0.8	2.1	metal-chelation protein CHAD
PS417_14110		+0.8	0.9	2-nitropropane dioxygenase
PS417_14505		+0.8	2.1	glycogen debranching protein
PS417_02035		+0.8	1.8	3-ketoacyl-ACP reductase
PS417_19765		+0.8	4.6	flagellar hook-length control protein
PS417_27945		+0.8	1.0	type VI secretion protein ImpA
PS417_26645		+0.8	2.2	chemotaxis protein
PS417_19735		+0.8	3.7	flagellar biosynthesis protein FliQ
PS417_19730		+0.8	1.5	flagellar biosynthesis protein FliR
PS417_26565		+0.8	1.6	LysR family transcriptional regulator
PS417_15480		+0.8	2.1	ABC transporter substrate-binding protein
PS417_10855		+0.8	3.1	chemotaxis protein CheY
PS417_14515		+0.8	1.3	acetylglucosaminylphosphatidylinositol deacetylase
PS417_22005		+0.8	1.7	epimerase
PS417_22875		+0.8	1.6	hypothetical protein
PS417_08295		+0.8	0.9	ATPase
PS417_19580		+0.8	2.8	acetyl-CoA carboxylase
PS417_18060		+0.8	1.7	general secretion pathway protein GspJ
PS417_10015		+0.8	0.9	hypothetical protein
PS417_19720		+0.8	1.2	DNA-binding protein
PS417_09545		+0.8	2.1	aldehyde-activating protein
PS417_19830		+0.8	3.6	flagellar assembly protein FliT
PS417_10920		+0.8	2.3	LysR family transcriptional regulator
PS417_02385		+0.8	1.0	esterase
PS417_16815		+0.8	1.2	acyl-CoA dehydrogenase
PS417_16050		+0.8	1.2	energy transducer TonB
PS417_04705		+0.8	1.0	hypothetical protein
PS417_10985		+0.7	0.9	NADH:flavin oxidoreductase
PS417_24275		+0.7	5.7	diguanylate phosphodiesterase
PS417_19725		+0.7	2.2	flagellar biosynthesis protein FlhB
PS417_09210		+0.7	0.9	TetR family transcriptional regulator
PS417_05920		+0.7	3.0	gamma-aminobutyraldehyde dehydrogenase
PS417_02895		+0.7	1.6	precorrin-6Y C5,15-methyltransferase
PS417_12870		+0.7	0.9	enoyl-CoA hydratase
PS417_19860		+0.7	5.4	flagellar hook protein FlgL
PS417_16055		+0.7	1.7	biopolymer transporter TolR
PS417_08350		+0.7	1.6	preprotein translocase subunit TatD
PS417_21655		+0.7	0.8	aspartate kinase
PS417_03190		+0.7	1.5	antibiotic biosynthesis monooxygenase
PS417_01420		+0.7	4.2	histidine kinase
PS417_18780		+0.7	1.2	flavin reductase
PS417_19555		+0.7	2.1	RNA polymerase sigma70
PS417_12375		+0.7	1.1	serine/threonine protein phosphatase
PS417_17960		+0.7	2.6	LysR family transcriptional regulator
PS417_00755		+0.7	0.4	biofilm PGA synthesis protein PgaD
PS417_26585		+0.7	1.8	malonate carrier protein
PS417_11340		+0.7	2.4	prevent-host-death protein
PS417_22375		+0.7	0.6	cold-shock protein
PS417_10405		+0.7	0.7	filamentous hemagglutinin
PS417_15445		+0.7	2.4	ABC transporter permease
PS417_11615		+0.7	1.0	urea ABC transporter ATP-binding protein
PS417_01825		+0.7	1.7	chemotaxis protein
PS417_14100		+0.7	1.9	alpha-ketoglutarate-dependent dioxygenase
PS417_17945		+0.7	0.7	hypothetical protein
PS417_04450		+0.7	3.3	hypothetical protein
PS417_21955		+0.7	1.5	dehydrogenase
PS417_27690		+0.7	1.3	XRE family transcriptional regulator
PS417_12205		+0.7	3.0	hypothetical protein
PS417_03045		+0.7	0.8	hypothetical protein
PS417_19215		+0.7	1.7	polyphosphate kinase
PS417_15495		+0.7	3.1	FAD-dependent oxidoreductase
PS417_23150		+0.7	1.3	Cro/Cl family transcriptional regulator
PS417_24115		+0.7	1.5	hypothetical protein
PS417_26935		+0.7	2.1	phosphonate ABC transporter substrate-binding protein
PS417_26120		+0.7	0.7	hypothetical protein
PS417_01395		+0.7	5.1	biofilm formation protein PelB
PS417_16560		+0.7	0.8	GNAT family acetyltransferase
PS417_20070		+0.6	1.7	hydrolase Nlp/P60
PS417_13490		+0.6	1.3	hypothetical protein
PS417_11770		+0.6	1.2	pyruvate dehydrogenase
PS417_19760		+0.6	1.9	flagellar basal body protein FliL
PS417_27215		+0.6	2.0	hypothetical protein
PS417_19745		+0.6	3.3	flagellar assembly protein FliO
PS417_02340		+0.6	2.0	LysR family transcriptional regulator
PS417_04975		+0.6	1.1	response regulator receiver protein
PS417_05970		+0.6	2.6	chemotaxis protein CheR
PS417_10680		+0.6	1.5	enoyl-CoA hydratase
PS417_01145		+0.6	0.7	taurine transporter ATP-binding subunit
PS417_23755		+0.6	1.4	membrane protein
PS417_11925		+0.6	0.8	hypothetical protein
PS417_00310		+0.6	2.3	cysteine synthase
PS417_26770		+0.6	1.2	tRNA (guanine-N7)-methyltransferase
PS417_22725		+0.6	2.3	chemotaxis protein
PS417_11075		+0.6	1.6	hydroxypyruvate isomerase
PS417_14075		+0.6	1.2	hypothetical protein
PS417_01410		+0.6	2.3	transporter
PS417_05160		+0.6	0.7	DNA polymerase III subunit chi
PS417_23005		+0.6	2.8	XRE family transcriptional regulator
PS417_27990		+0.6	1.3	hypothetical protein
PS417_07270		+0.6	2.1	LysR family transcriptional regulator
PS417_05985		+0.6	1.2	chemotaxis protein CheY
PS417_00625		+0.6	3.1	taurine dioxygenase
PS417_09470		+0.6	0.5	hypothetical protein
PS417_21285		+0.6	1.7	hypothetical protein
PS417_00810		+0.6	0.7	RNA polymerase sigma factor
PS417_16845		+0.6	1.3	monovalent cation/H+ antiporter subunit E
PS417_18025		+0.6	1.8	cytochrome C
PS417_18630		+0.6	1.0	tRNA-dihydrouridine synthase C
PS417_13495		+0.6	2.5	nuclease
PS417_16945		+0.6	1.8	LuxR family transcriptional regulator
PS417_25175		+0.6	1.5	hypothetical protein
PS417_04960		+0.6	0.8	hypothetical protein
PS417_13655		+0.6	2.1	xylulose kinase
PS417_08575		+0.6	1.4	MarR family transcriptional regulator
PS417_07015		+0.6	1.7	helicase
PS417_02725		+0.6	1.4	hypothetical protein
PS417_04875		+0.6	0.8	molybdenum cofactor biosynthesis protein MoaE
PS417_13305		+0.6	0.8	hypothetical protein
PS417_04215		+0.6	3.1	malate transporter
PS417_23505		+0.6	1.0	cell division protein DedD
PS417_11110		+0.6	1.7	xylose isomerase
PS417_19840		+0.6	3.1	flagellar cap protein FliD
PS417_18140		+0.6	1.6	hypothetical protein
PS417_20415		+0.6	2.6	reverse transcriptase
PS417_07000		+0.6	1.0	hypothetical protein
PS417_19520		+0.6	1.6	transcriptional regulator
PS417_02465		+0.6	1.0	carbohydrate kinase
PS417_06850		+0.6	1.4	methanol dehydrogenase
PS417_19790		+0.6	1.1	ATP synthase
PS417_24180		+0.6	4.5	hypothetical protein
PS417_10125		+0.6	1.0	hypothetical protein
PS417_01685		+0.6	1.5	membrane protein
PS417_08020		+0.6	2.4	LysR family transcriptional regulator
PS417_11785		+0.6	1.8	glutamine synthetase
PS417_22855		+0.6	1.6	ssDNA exonuclease RecJ
PS417_11485		+0.6	1.1	AraC family transcriptional regulator
PS417_06165		+0.6	0.9	thiamine biosynthesis protein ThiF
PS417_16555		+0.6	0.8	cupin
PS417_15560		+0.6	1.1	hypothetical protein

Specific Phenotypes

For 3 genes in this experiment