Experiment set14IT020 for Agrobacterium fabrum C58

Compare to:

Xylobiose carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu2368 +1.1 1.7 hypothetical protein compare
Atu4364 +1.0 6.4 LacI family transcriptional regulator compare
Atu1219 +0.8 1.3 hypothetical protein compare
Atu3468 +0.8 1.1 hypothetical protein compare
Atu1522 +0.8 5.9 transcriptional regulator, LacI family compare
Atu0784 +0.8 2.3 hypothetical protein compare
Atu0115 +0.7 1.3 hypothetical protein compare
Atu5121 +0.7 5.1 two component response regulator compare
Atu2787 +0.7 1.2 hypothetical protein compare
Atu2140 +0.6 1.1 hypothetical protein compare
Atu1818 +0.6 2.4 hypothetical protein compare
Atu5430 +0.6 0.7 hypothetical protein compare
Atu5186 +0.6 1.6 hypothetical protein compare
Atu4055 +0.6 2.7 endo-1,3-1,4-beta-glycanase compare
Atu4217 +0.6 0.8 TetR family transcriptional regulator compare
Atu0119 +0.6 1.2 hypothetical protein compare
Atu8025 +0.6 1.2 hypothetical protein compare
Atu1189 +0.6 1.8 hypothetical protein compare
Atu3610 +0.6 3.3 transporter compare
Atu3598 +0.6 1.3 thiol:disulfide interchange protein compare
Atu8088 +0.5 1.6 hypothetical protein compare
Atu3668 +0.5 2.1 siderophore biosynthesis protein compare
Atu0485 +0.5 1.6 hypothetical protein compare
Atu0986 +0.5 1.0 hypothetical protein compare
Atu5057 +0.5 1.0 hypothetical protein compare
Atu3510 +0.5 1.7 amidohydrolase compare
Atu1830 +0.5 2.3 bacterioferritin comigratory protein compare
Atu6179 +0.5 2.1 virA/G regulated protein compare
Atu0645 +0.5 0.9 hypothetical protein compare
Atu1098 +0.5 1.4 hypothetical protein compare
Atu3578 +0.5 2.4 glycerol-3-phosphate dehydrogenase compare
Atu2399 +0.5 1.9 hypothetical protein compare
Atu1968 +0.5 1.3 hypothetical protein compare
Atu5485 +0.5 1.4 hypothetical protein compare
Atu5162 +0.5 2.0 type IV secretion protein AvhB1 compare
Atu1149 +0.5 1.2 adenylate cyclase compare
Atu8170 +0.5 3.4 hypothetical protein compare
Atu1031 +0.5 2.1 hypothetical protein compare
Atu5095 +0.5 2.2 hypothetical protein compare
Atu1629 +0.5 1.0 transcriptional regulator, ArsR family compare
Atu5455 +0.5 1.9 hypothetical protein compare
Atu5196 +0.5 1.5 hypothetical protein compare
Atu4753 +0.5 1.5 amino acid ABC transporter permease compare
Atu1737 +0.5 1.8 hypothetical protein compare
Atu1896 +0.5 2.3 hypothetical protein compare
Atu0026 +0.5 0.7 hypothetical protein compare
Atu1123 +0.5 2.2 hypothetical protein compare
Atu8181 +0.5 2.3 hypothetical protein compare
Atu1566 +0.4 0.7 hypothetical protein compare
Atu4035 +0.4 3.1 two component response regulator compare
Atu4245 +0.4 1.8 polyamine ABC transporter permease compare
Atu0959 +0.4 2.1 hypothetical protein compare
Atu0824 +0.4 0.8 hypothetical protein compare
Atu0590 +0.4 2.8 transcriptional regulator repressor compare
Atu0640 +0.4 1.5 hypothetical protein compare
Atu0904 +0.4 1.2 hypothetical protein compare
Atu5438 +0.4 2.4 3-oxoacyl-ACP reductase compare
Atu1070 +0.4 2.3 hypothetical protein compare
Atu0105 +0.4 1.2 hypothetical protein compare
Atu1858 +0.4 1.7 hypothetical protein compare
Atu2757 +0.4 2.2 nitrogen regulatory protein PII compare
Atu0874 +0.4 2.3 acetyltransferase compare
Atu0961 +0.4 1.3 hypothetical protein compare
Atu4095 +0.4 2.1 hypothetical protein compare
Atu0185 +0.4 1.4 methylglyoxal synthase compare
Atu2526 +0.4 1.8 hypothetical protein compare
Atu1734 +0.4 1.3 hypothetical protein compare
Atu1608 +0.4 1.8 hypothetical protein compare
Atu3182 +0.4 1.8 hypothetical protein compare
Atu1980 +0.4 1.1 hypothetical protein compare
Atu2344 +0.4 1.5 lactoylglutathione lyase compare
Atu0827 +0.4 2.1 hypothetical protein compare
Atu3432 +0.4 2.1 desulfurizing enzyme compare
Atu1529 +0.4 2.1 nitrogen fixation protein FixH compare
Atu5097 +0.4 1.8 ATP-dependent DNA ligase compare
Atu1570 +0.4 0.6 hypothetical protein compare
Atu0943 +0.4 1.2 hypothetical protein compare
Atu2117 +0.4 2.0 lytic murein transglycosylase compare
Atu4406 +0.4 1.7 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu4589 +0.4 2.1 transmembrane transport protein compare
Atu1884 +0.4 1.5 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu2794 +0.4 1.0 uroporphyrin-III C-methyltransferase compare
Atu2187 +0.4 1.6 transcriptional regulator, ArsR family compare
Atu1125 +0.4 1.9 ABC transporter, membrane spanning protein compare
Atu0236 +0.4 1.2 hypothetical protein compare
Atu4141 +0.4 2.5 hypothetical protein compare
Atu0225 +0.4 0.5 hypothetical protein compare
Atu0319 +0.4 0.7 ubiquinone biosynthesis protein compare
Atu4747 +0.4 2.1 sugar ABC transporter permease compare
Atu3980 +0.4 2.4 hydrolase compare
Atu5128 +0.4 2.6 ABC transporter membrane spanning protein (mannopine) compare
Atu0545 +0.4 2.7 flagella associated protein compare
Atu3827 +0.4 2.4 LysR family transcriptional regulator compare
Atu0547 +0.4 2.5 flagellar protein compare
Atu0795 +0.4 0.6 hypothetical protein compare
Atu4200 +0.4 1.7 hypothetical protein compare
Atu3506 +0.4 1.4 hypothetical protein compare
Atu1026 +0.4 1.2 hypothetical protein compare
Atu6126 +0.4 1.8 conjugal transfer protein, Dtr system compare
Atu3802 +0.4 2.2 proline/glycine betaine ABC transporter ATPase compare
Atu2110 +0.4 1.7 sarcosine oxidase compare
Atu4389 +0.4 2.0 nitric oxide reductase, cytochrome c-containing subunit compare
Atu0386 +0.4 0.9 hypothetical protein compare
Atu0996 +0.4 2.0 zinc-binding dehydrogenase compare
Atu1082 +0.4 1.6 branched-chain amino acid permease compare
Atu3476 +0.4 1.8 AsnC family transcriptional regulator compare
Atu4101 +0.4 1.5 hypothetical protein compare
Atu0467 +0.4 1.8 hypothetical protein compare
Atu1557 +0.4 1.9 alcohol dehydrogenase compare
Atu3017 +0.4 0.7 phosphoglyceromutase compare
Atu3287 +0.4 1.7 thiamine biosynthesis associated protein compare
Atu2354 +0.4 1.2 transcriptional regulator, MarR family compare
Atu4733 +0.4 2.1 hypothetical protein compare
Atu0565 +0.4 1.2 hypothetical protein compare
Atu3786 +0.4 2.2 two component response regulator compare
Atu6112 +0.3 1.0 conserved hypothetical protein compare
Atu6157 +0.3 2.0 conserved hypothetical protein compare
Atu1062 +0.3 0.9 phosphatidylserine synthase compare
Atu1606 +0.3 1.8 methionine aminopeptidase compare
Atu0525 +0.3 1.6 transcriptional regulator, LuxR family compare
Atu5448 +0.3 2.0 hypothetical protein compare
Atu8057 +0.3 0.8 hypothetical protein compare
Atu3203 +0.3 1.8 RND multidrug efflux membrane permease compare
Atu2796 +0.3 1.5 precorrin-4 C11-methyltransferase compare
Atu2692 +0.3 1.8 intracellular septation protein compare
Atu1872 +0.3 1.9 hypothetical protein compare
Atu4504 +0.3 2.8 MarR family transcriptional regulator compare
Atu4071 +0.3 1.9 hypothetical protein compare
Atu5544 +0.3 2.1 hypothetical protein compare
Atu0470 +0.3 1.0 hypothetical protein compare
Atu1349 +0.3 1.9 hypothetical protein compare
Atu0587 +0.3 1.8 teichoic acid biosynthesis protein compare
Atu1492 +0.3 1.6 transcriptional regulator, ArsR family compare
Atu8031 +0.3 2.0 hypothetical protein compare
Atu3387 +0.3 1.4 sigma factor compare
Atu5081 +0.3 1.8 ABC transporter membrane spanning protein (sugar) compare
Atu0206 +0.3 0.8 hypothetical protein compare
Atu4506 +0.3 2.0 hypothetical protein compare
Atu1302 +0.3 1.1 hypothetical protein compare
Atu2600 +0.3 1.9 ABC transporter, nucleotide binding/ATPase protein (maltose/maltodextrin) compare
Atu2812 +0.3 1.6 hypothetical protein compare
Atu0502 +0.3 1.8 acetyl-CoA acetyltransferase compare
Atu3465 +0.3 1.2 metallo-beta-lactamase superfamily protein compare
Atu6106 +0.3 1.0 conserved hypothetical protein compare
Atu4574 +0.3 2.0 dehydrogenase compare
Atu4507 +0.3 1.8 dehydrogenase compare
Atu8133 +0.3 1.5 hypothetical protein compare
Atu6159 +0.3 0.9 hypothetical protein compare
Atu1005 +0.3 1.5 hypothetical protein compare
Atu0857 +0.3 2.3 oxidoreductase compare
Atu4468 +0.3 2.0 iron transport ABC transporter permease compare
Atu3454 +0.3 1.9 arylesterase compare
Atu0886 +0.3 0.6 hypothetical protein compare
Atu0869 +0.3 1.9 hypothetical protein compare
Atu1880 +0.3 1.6 ABC transporter, membrane spanning protein (amino acid) compare
Atu2078 +0.3 1.8 transcriptional regulator, LysR family compare
Atu6071 +0.3 1.7 Zn-dependent hydrolases compare
Atu3603 +0.3 1.0 two component response regulator compare
Atu0707 +0.3 2.1 transcriptional regulator, LuxR family compare
Atu1641 +0.3 2.1 hypothetical protein compare
Atu3111 +0.3 2.1 sugar ABC transporter ATPase compare
Atu2421 +0.3 1.9 chitooligosaccharide deacetylase compare
Atu1221 +0.3 1.7 hypothetical protein compare
Atu1366 +0.3 1.1 hypothetical protein compare
Atu3155 +0.3 1.5 LysR family transcriptional regulator compare
Atu0184 +0.3 0.9 glucokinase compare
Atu3370 +0.3 1.7 sugar ABC transporter permease compare
Atu1739 +0.3 1.4 permease compare
Atu3131 +0.3 2.3 sugar ABC transporter ATPase compare
Atu0528 +0.3 0.9 large conductance mechanosensitive channel protein compare
Atu6180 +0.3 1.8 virA/G regulated protein compare
Atu2074 +0.3 1.5 hypothetical protein compare
Atu3123 +0.3 2.2 30S ribosomal protein S21 compare
Atu4327 +0.3 1.5 hypothetical protein compare
Atu1846 +0.3 0.7 hypothetical protein compare
Atu0888 +0.3 1.0 transcriptional regulator, MerR family compare
Atu4759 +0.3 2.0 threonine dehydratase compare
Atu2683 +0.3 0.7 hypothetical protein compare
Atu3434 +0.3 1.6 oligopeptide ABC transporter permease compare
Atu2189 +0.3 1.5 hypothetical protein compare
Atu2334 +0.3 1.6 hypothetical protein compare
Atu0071 +0.3 2.0 ribonucleoside-diphosphate reductase 2 beta chain compare
Atu2017 +0.3 0.6 hypothetical protein compare
Atu6107 +0.3 0.7 hypothetical protein compare
Atu1371 +0.3 1.9 glycerophosphoryl diester phosphodiesterase compare
Atu1754 +0.3 0.7 hypothetical protein compare
Atu0698 +0.3 1.3 hypothetical protein compare
Atu1882 +0.3 1.1 usg protein compare
Atu0095 +0.3 1.1 hypothetical protein compare
Atu6053 +0.3 1.2 conserved hypothetical protein compare
Atu1702 +0.3 1.4 stationary-phase survival protein compare
Atu0604 +0.3 1.2 hypothetical protein compare
Atu8161 +0.3 0.4 hypothetical protein compare
Atu1301 +0.3 1.3 hypothetical protein compare
Atu4142 +0.3 1.8 proteinase compare
Atu2729 +0.3 0.5 hypothetical protein compare
Atu5487 +0.3 1.6 hypothetical protein compare
Atu1982 +0.3 1.9 sigma factor compare
Atu0733 +0.3 1.8 enoyl-CoA hydratase/isomerase compare
Atu2204 +0.3 1.0 hypothetical protein compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source Xylobiose in Agrobacterium fabrum C58

For carbon source Xylobiose across organisms