| | gene | name | fitness | t score | description | |
|---|
| b2512 | yfgL | -3.3 | -3.8 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b1192 | ldcA | -2.7 | -3.9 | L,D-carboxypeptidase A (NCBI) | compare |
| b2431 | b2431 | -2.7 | -6.8 | orf, hypothetical protein (VIMSS) | compare |
| b3405 | ompR | -2.4 | -1.7 | osmolarity response regulator (NCBI) | compare |
| b2215 | ompC | -2.2 | -7.3 | outer membrane porin protein C (NCBI) | compare |
| b1863 | ruvC | -2.2 | -1.4 | Holliday junction resolvase (NCBI) | compare |
| b1476 | fdnI | -2.1 | -1.7 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b3839 | tatC | -2.1 | -4.2 | TatABCE protein translocation system subunit (NCBI) | compare |
| b0741 | pal | -2.0 | -2.6 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b0088 | murD | -2.0 | -2.2 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamatesynthetase (NCBI) | compare |
| b0688 | pgm | -1.9 | -1.8 | phosphoglucomutase (NCBI) | compare |
| b2017 | yefM | -1.9 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1942 | fliJ | -1.9 | -1.3 | flagellar biosynthesis chaperone (NCBI) | compare |
| b1090 | plsX | -1.9 | -5.1 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b4242 | mgtA | -1.9 | -1.3 | magnesium transporter (NCBI) | compare |
| b0019 | nhaA | -1.8 | -7.3 | pH-dependent sodium/proton antiporter (NCBI) | compare |
| b0053 | surA | -1.7 | -1.7 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b3652 | recG | -1.7 | -6.5 | ATP-dependent DNA helicase (NCBI) | compare |
| b0740 | tolB | -1.7 | -3.0 | translocation protein TolB precursor (NCBI) | compare |
| b0439 | lon | -1.7 | -2.2 | DNA-binding ATP-dependent protease La (NCBI) | compare |
| b1304 | pspA | -1.7 | -2.5 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b3778 | rep | -1.7 | -4.9 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b1830 | prc | -1.6 | -4.2 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b3026 | qseC | -1.6 | -1.1 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b3390 | aroK | -1.5 | -2.3 | shikimate kinase I (NCBI) | compare |
| b3229 | sspA | -1.5 | -1.7 | stringent starvation protein A (NCBI) | compare |
| b2518 | ndk | -1.5 | -2.0 | nucleoside diphosphate kinase (NCBI) | compare |
| b4171 | miaA | -1.5 | -1.0 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b3404 | envZ | -1.5 | -7.0 | osmolarity sensor protein (NCBI) | compare |
| b3962 | udhA | -1.5 | -3.0 | putative oxidoreductase (VIMSS) | compare |
| b4481 | rffT | -1.5 | -4.7 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1540 | ydfH | -1.4 | -2.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2282 | nuoH | -1.4 | -2.7 | NADH dehydrogenase subunit H (NCBI) | compare |
| b0957 | ompA | -1.4 | -2.5 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b1175 | minD | -1.4 | -3.3 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b2808 | gcvA | -1.4 | -2.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b4603 | rseX | -1.4 | -0.7 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b2576 | srmB | -1.4 | -2.1 | ATP-dependent RNA helicase (NCBI) | compare |
| b1865 | nudB | -1.3 | -1.3 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0014 | dnaK | -1.3 | -1.9 | molecular chaperone DnaK (NCBI) | compare |
| b3387 | dam | -1.3 | -7.0 | DNA adenine methylase (NCBI) | compare |
| b2280 | nuoJ | -1.3 | -3.9 | NADH dehydrogenase subunit J (NCBI) | compare |
| b4685 | yrbN | -1.3 | -2.0 | expressed protein (RefSeq) | compare |
| b3863 | polA | -1.3 | -0.8 | DNA polymerase I (NCBI) | compare |
| b1185 | dsbB | -1.3 | -2.8 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b3613 | yibP | -1.3 | -1.9 | putative membrane protein (VIMSS) | compare |
| b1292 | sapC | -1.3 | -1.8 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3977 | tyrU | -1.3 | -1.2 | tRNA-Tyr (NCBI) | compare |
| b2285 | nuoE | -1.2 | -1.6 | NADH dehydrogenase subunit E (NCBI) | compare |
| b3838 | tatB | -1.2 | -4.7 | sec-independent translocase (NCBI) | compare |
| b1109 | ndh | -1.2 | -3.4 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b3650 | spoT | -1.2 | -4.5 | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase (NCBI) | compare |
| b3636 | rpmG | -1.2 | -1.5 | 50S ribosomal protein L33 (NCBI) | compare |
| b1847 | yebF | -1.2 | -1.4 | predicted protein (RefSeq) | compare |
| b3792 | wzxE | -1.2 | -3.7 | O-antigen translocase (NCBI) | compare |
| b0560 | nohB | -1.2 | -2.2 | DLP12 prophage; DNA packaging protein (NCBI) | compare |
| b2830 | nudH | -1.2 | -0.8 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b1685 | ydiH | -1.1 | -1.3 | predicted protein (RefSeq) | compare |
| b3443 | yrhA | -1.1 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4436 | ryeC | -1.1 | -1.3 | Novel sRNA, function unknown; paralogous to the other QUAD sRNA genes unknown (RefSeq) | compare |
| b0814 | ompX | -1.1 | -2.4 | outer membrane protein X (NCBI) | compare |
| b0472 | recR | -1.1 | -4.8 | recombination protein RecR (NCBI) | compare |
| b1085 | b1085 | -1.1 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2175 | spr | -1.1 | -2.5 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b1293 | sapB | -1.1 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b0149 | mrcB | -1.1 | -6.5 | penicillin-binding protein 1b (NCBI) | compare |
| b1758 | b1758 | -1.1 | -1.5 | putative cytochrome oxidase (VIMSS) | compare |
| b1095 | fabF | -1.1 | -4.7 | 3-oxoacyl-(acyl carrier protein) synthase (NCBI) | compare |
| b3644 | yicC | -1.1 | -3.9 | hypothetical protein (NCBI) | compare |
| b2565 | recO | -1.1 | -3.4 | DNA repair protein RecO (NCBI) | compare |
| b3791 | rffA | -1.1 | -3.8 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b0605 | ahpC | -1.1 | -2.9 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b2912 | ygfA | -1.0 | -2.4 | putative ligase (VIMSS) | compare |
| b2951 | yggS | -1.0 | -3.0 | predicted enzyme (NCBI) | compare |
| b4042 | dgkA | -1.0 | -1.5 | diacylglycerol kinase (NCBI) | compare |
| b1874 | cutC | -1.0 | -2.0 | copper homeostasis protein (NCBI) | compare |
| b1161 | ycgX | -1.0 | -0.6 | hypothetical protein (NCBI) | compare |
| b2424 | cysU | -1.0 | -1.8 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b3935 | priA | -1.0 | -1.9 | primosome assembly protein PriA (NCBI) | compare |
| b3181 | greA | -1.0 | -2.8 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b3035 | tolC | -1.0 | -4.6 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0247 | ykfG | -1.0 | -0.9 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b0737 | tolQ | -1.0 | -1.2 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1279 | yciS | -1.0 | -1.0 | conserved inner membrane protein (NCBI) | compare |
| b3052 | rfaE | -1.0 | -2.7 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b1357 | ydaS | -0.9 | -1.3 | Rac prophage; predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1520 | b1520 | -0.9 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b3620 | rfaF | -0.9 | -2.5 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b3609 | secB | -0.9 | -2.5 | export protein SecB (NCBI) | compare |
| b3726 | pstA | -0.9 | -2.5 | phosphate transporter subunit (NCBI) | compare |
| b0739 | tolA | -0.9 | -1.0 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b2620 | smpB | -0.9 | -0.7 | SsrA-binding protein (NCBI) | compare |
| b1984 | asnW | -0.9 | -1.3 | tRNA-Asn (NCBI) | compare |
| b1749 | xthA | -0.9 | -2.2 | exonuclease III (NCBI) | compare |
| b0051 | ksgA | -0.9 | -2.1 | dimethyladenosine transferase (NCBI) | compare |
| b4568 | ytjA | -0.9 | -1.7 | predicted protein (RefSeq) | compare |
| b2277 | nuoM | -0.9 | -3.1 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2910 | zapA | -0.9 | -2.9 | protein that localizes to the cytokinetic ring (NCBI) | compare |
| b1861 | ruvA | -0.9 | -0.5 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b4509 | ylcG | -0.9 | -1.3 | DLP12 prophage; predicted protein (NCBI) | compare |
| b1765 | ydjA | -0.9 | -0.7 | predicted oxidoreductase (NCBI) | compare |
| b4217 | ytfK | -0.9 | -2.9 | orf, hypothetical protein (VIMSS) | compare |
| b4533 | ynfO | -0.9 | -1.2 | Qin prophage; predicted protein (NCBI) | compare |
| b3700 | recF | -0.9 | -5.2 | recombination protein F (NCBI) | compare |
| b0092 | ddlB | -0.8 | -2.6 | D-alanylalanine synthetase (NCBI) | compare |
| b3341 | rpsG | -0.8 | -0.6 | 30S ribosomal protein S7 (NCBI) | compare |
| b4163 | glyV | -0.8 | -1.2 | tRNA-Gly (NCBI) | compare |
| b4203 | rplI | -0.8 | -2.1 | 50S ribosomal protein L9 (NCBI) | compare |
| b3790 | rffC | -0.8 | -2.4 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b4453 | ldrD | -0.8 | -1.7 | toxic polypeptide, small (NCBI) | compare |
| b0438 | clpX | -0.8 | -3.2 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b0263 | afuB | -0.8 | -1.8 | CP4-6 prophage; predicted ferric trasnporter subunit (RefSeq) | compare |
| b4179 | vacB | -0.8 | -2.6 | putative enzyme (VIMSS) | compare |
| b1502 | ydeQ | -0.8 | -1.0 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b2080 | b2080 | -0.8 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1730 | ydjO | -0.8 | -0.5 | predicted protein (RefSeq) | compare |
| b0161 | degP | -0.8 | -4.1 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b1684 | sufA | -0.8 | -1.1 | iron-sulfur cluster assembly scaffold protein (NCBI) | compare |
| b2618 | b2618 | -0.8 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b0890 | ftsK | -0.8 | -1.1 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b4630 | ykgP | -0.8 | -1.4 | no description | compare |
| b0843 | ybjH | -0.8 | -1.2 | hypothetical protein (NCBI) | compare |
| b0738 | tolR | -0.8 | -1.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b0802 | ybiJ | -0.8 | -1.6 | hypothetical protein (NCBI) | compare |
| b4594 | ymgJ | -0.8 | -1.2 | hypothetical protein (RefSeq) | compare |
| b0119 | yacL | -0.8 | -4.2 | orf, hypothetical protein (VIMSS) | compare |
| b2432 | yfeY | -0.8 | -1.3 | hypothetical protein (NCBI) | compare |
| b2617 | smpA | -0.8 | -1.5 | small membrane protein A (VIMSS) | compare |
| b1630 | rsxD | -0.8 | -2.5 | electron transport complex protein RnfD (NCBI) | compare |
| b1920 | fliY | -0.8 | -1.3 | cystine transporter subunit (NCBI) | compare |
| b4441 | glmY | -0.8 | -1.2 | sRNA activator of glmS mRNA (RefSeq) | compare |
| b1183 | umuD | -0.8 | -0.9 | DNA polymerase V, subunit D (NCBI) | compare |
| b3180 | yhbY | -0.8 | -2.8 | predicted RNA-binding protein (NCBI) | compare |
| b0125 | hpt | -0.8 | -2.6 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b3493 | pitA | -0.7 | -2.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b3813 | uvrD | -0.7 | -5.3 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b4634 | ylcF | -0.7 | -2.1 | no description | compare |
| b3786 | rffE | -0.7 | -4.7 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b1164 | ycgZ | -0.7 | -0.8 | hypothetical protein (NCBI) | compare |
| b3260 | dusB | -0.7 | -2.9 | tRNA-dihydrouridine synthase B (NCBI) | compare |
| b1712 | ihfA | -0.7 | -0.9 | integration host factor subunit alpha (NCBI) | compare |
| b4201 | priB | -0.7 | -1.5 | primosomal replication protein N (NCBI) | compare |
| b1159 | mcrA | -0.7 | -0.4 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b1506 | yneL | -0.7 | -0.7 | predicted transcriptional regulator (NCBI) | compare |
| b4596 | yciZ | -0.7 | -1.0 | hypothetical protein (RefSeq) | compare |
| b2195 | ccmG | -0.7 | -1.6 | periplasmic thioredoxin of cytochrome c-type biogenesis (NCBI) | compare |
| b1669 | ydhT | -0.7 | -1.3 | hypothetical protein (NCBI) | compare |
| b1594 | dgsA | -0.7 | -1.7 | DNA-binding transcriptional repressor (NCBI) | compare |
| b3950 | frwB | -0.7 | -1.6 | predicted enzyme IIB component of PTS (NCBI) | compare |
| b3842 | rfaH | -0.7 | -2.4 | transcriptional activator RfaH (NCBI) | compare |
| b1503 | ydeR | -0.7 | -1.1 | predicted fimbrial-like adhesin protein (NCBI) | compare |
| b3787 | rffD | -0.7 | -4.0 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b4208 | cycA | -0.7 | -4.0 | D-alanine/D-serine/glycine transporter (NCBI) | compare |
| b3961 | oxyR | -0.7 | -4.0 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2892 | recJ | -0.7 | -3.7 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | compare |
| b2450 | yffS | -0.7 | -1.3 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b3761 | trpT | -0.7 | -1.1 | tRNA-Trp (NCBI) | compare |
| b1855 | lpxM | -0.7 | -2.2 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0623 | cspE | -0.7 | -1.0 | cold shock protein E (NCBI) | compare |
| b2894 | xerD | -0.7 | -0.4 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1846 | yebE | -0.7 | -2.1 | hypothetical protein (NCBI) | compare |
| b1853 | yebK | -0.7 | -1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2390 | ypeC | -0.7 | -2.1 | hypothetical protein (NCBI) | compare |
| b2340 | sixA | -0.7 | -1.6 | phosphohistidine phosphatase (NCBI) | compare |
| b3205 | yhbJ | -0.7 | -1.8 | hypothetical protein (NCBI) | compare |
| b2614 | grpE | -0.7 | -1.1 | heat shock protein (NCBI) | compare |
| b4410 | ecnA | -0.7 | -1.1 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b3250 | mreC | -0.7 | -0.8 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b4246 | pyrL | -0.7 | -1.2 | pyrBI operon leader peptide (NCBI) | compare |
| b3915 | fieF | -0.7 | -4.2 | ferrous iron efflux protein F (NCBI) | compare |
| b1763 | topB | -0.7 | -2.1 | DNA topoisomerase III (NCBI) | compare |
| b3784 | rfe | -0.7 | -4.2 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b2082 | ogrK | -0.7 | -1.3 | DNA-binding transcriptional regulator prophage P2 remnant (NCBI) | compare |
| b0720 | gltA | -0.7 | -2.7 | citrate synthase (NCBI) | compare |
| b0407 | yajC | -0.7 | -1.1 | preprotein translocase subunit YajC (NCBI) | compare |
| b1333 | uspE | -0.7 | -1.7 | stress-induced protein (NCBI) | compare |
| b2007 | yeeX | -0.6 | -1.7 | conserved protein (RefSeq) | compare |
| b0649 | djlC | -0.6 | -2.7 | Hsc56 co-chaperone of HscC (NCBI) | compare |
| b1742 | b1742 | -0.6 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1171 | b1171 | -0.6 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3247 | cafA | -0.6 | -3.9 | bundles of cytoplasmic filaments (VIMSS) | compare |
| b1708 | nlpC | -0.6 | -2.0 | predicted lipoprotein (NCBI) | compare |
| b1505 | ydeT | -0.6 | -0.6 | hypothetical protein (RefSeq) | compare |
| b3292 | zntR | -0.6 | -1.4 | zinc-responsive transcriptional regulator (NCBI) | compare |
| b0931 | pncB | -0.6 | -2.2 | nicotinate phosphoribosyltransferase (NCBI) | compare |
| b3836 | b3836 | -0.6 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b2250 | b2250 | -0.6 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b4546 | ypeB | -0.6 | -0.8 | hypothetical protein (NCBI) | compare |
| b2699 | recA | -0.6 | -0.4 | recombinase A (NCBI) | compare |
| b0412 | yajI | -0.6 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b1545 | pinQ | -0.6 | -0.3 | Qin prophage; predicted site-specific recombinase (NCBI) | compare |
| b1551 | b1551 | -0.6 | -0.3 | orf, hypothetical protein (VIMSS) | compare |
| b3150 | yraP | -0.6 | -2.5 | hypothetical protein (NCBI) | compare |
| b2284 | nuoF | -0.6 | -1.3 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b0437 | clpP | -0.6 | -1.9 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0955 | ycbZ | -0.6 | -3.0 | predicted peptidase (NCBI) | compare |
| b3794 | rffM | -0.6 | -2.6 | putative UDP-N-acetyl-D-mannosaminuronic acid transferase (NCBI) | compare |
| b1360 | ydaV | -0.6 | -1.4 | Rac prophage; predicted DNA replication protein (NCBI) | compare |
| b3101 | yqjF | -0.6 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4418 | sraB | -0.6 | -1.0 | unknown RNA (NCBI) | compare |