Experiment set14IT019 for Agrobacterium fabrum C58

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu2598 +4.2 31.7 transcriptional regulator, RpiR family compare
Atu3577 +3.2 27.9 transcriptional regulator conserved
Atu3928 +2.0 18.4 hypothetical protein compare
Atu2595 +1.2 9.0 hypothetical protein compare
Atu2593 +1.1 8.1 copper homeostasis protein compare
Atu8181 +1.0 3.6 hypothetical protein compare
Atu2596 +1.0 8.3 beta-N-acetylhexosaminidase compare
Atu1446 +0.9 1.4 two component response regulator compare
Atu2594 +0.9 5.6 MFS permease compare
Atu5121 +0.8 6.3 two component response regulator compare
Atu1836 +0.8 2.2 hypothetical protein compare
Atu8056 +0.8 1.7 hypothetical protein compare
Atu5489 +0.7 2.5 hypothetical protein compare
Atu1888 +0.7 5.6 two component sensor kinase compare
Atu2634 +0.6 2.5 hypothetical protein compare
Atu8082 +0.6 1.9 hypothetical protein compare
Atu0941 +0.6 1.1 hypothetical protein compare
Atu2597 +0.6 5.4 short-chain dehydrogenase compare
Atu1110 +0.6 2.4 cytosol aminopeptidase compare
Atu2325 +0.6 1.7 hypothetical protein compare
Atu3423 +0.6 0.7 hypothetical protein compare
Atu1734 +0.6 2.0 hypothetical protein compare
Atu1301 +0.6 1.3 hypothetical protein compare
Atu8158 +0.6 2.2 hypothetical protein compare
Atu2710 +0.6 4.5 hypothetical protein compare
Atu8035 +0.6 1.8 hypothetical protein compare
Atu3266 +0.6 3.7 dihydroorotase compare
Atu3160 +0.6 2.2 hypothetical protein compare
Atu2797 +0.5 2.1 cobalamin biosynthesis protein compare
Atu5163 +0.5 1.7 type IV secretion protein AvhB2 compare
Atu3468 +0.5 0.8 hypothetical protein compare
Atu2746 +0.5 1.9 hypothetical protein compare
Atu0105 +0.5 2.4 hypothetical protein compare
Atu0525 +0.5 3.1 transcriptional regulator, LuxR family compare
Atu0544 +0.5 1.3 hypothetical protein compare
Atu4021 +0.5 2.3 LysR family transcriptional regulator compare
Atu0843 +0.5 3.9 P type cation (metal) transporter, ATPase component compare
Atu2125 +0.5 1.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu5451 +0.5 0.8 hypothetical protein compare
Atu1302 +0.5 1.1 hypothetical protein compare
Atu0119 +0.5 1.0 hypothetical protein compare
Atu3775 +0.5 0.8 hypothetical protein compare
Atu1846 +0.5 1.2 hypothetical protein compare
Atu2157 +0.5 2.2 tyrosine/serine protein phosphatase compare
Atu4574 +0.5 2.1 dehydrogenase compare
Atu0690 +0.5 1.3 hypothetical protein compare
Atu2344 +0.5 1.5 lactoylglutathione lyase compare
Atu3032 +0.5 2.1 hypothetical protein compare
Atu1287 +0.5 1.7 hypothetical protein compare
Atu4033 +0.5 3.1 sugar ABC transporter substrate-binding protein compare
Atu1077 +0.4 1.8 DNA repair protein compare
Atu5129 +0.4 3.4 ABC transporter substrate binding protein (mannopine) compare
Atu3788 +0.4 2.6 potassium-transporting ATPase subunit C compare
Atu5498 +0.4 2.2 oxidoreductase with iron-sulfur subunit compare
Atu1619 +0.4 1.1 protein-export membrane protein SECG compare
Atu2163 +0.4 1.0 hypothetical protein compare
Atu3588 +0.4 1.9 DNA-3-methyladenine glycosidase II compare
Atu5167 +0.4 1.5 type IV secretion protein AvhB6 compare
Atu0892 +0.4 2.0 hypothetical protein compare
Atu2335 +0.4 1.1 hypothetical protein compare
Atu0485 +0.4 2.2 hypothetical protein compare
Atu6156 +0.4 2.5 virA/G regulated gene compare
Atu3095 +0.4 1.9 hypothetical protein compare
Atu8140 +0.4 2.2 hypothetical protein compare
Atu0524 +0.4 2.0 transcriptional regulator, LuxR family compare
Atu2352 +0.4 1.2 hypothetical protein compare
Atu2140 +0.4 1.0 hypothetical protein compare
Atu4469 +0.4 2.0 iron ABC transporter permease compare
Atu0184 +0.4 0.9 glucokinase compare
Atu6067 +0.4 2.3 conserved hypothetical protein compare
Atu5095 +0.4 1.6 hypothetical protein compare
Atu2057 +0.4 1.2 DNA helicase II compare
Atu4035 +0.4 2.1 two component response regulator compare
Atu3465 +0.4 1.1 metallo-beta-lactamase superfamily protein compare
Atu1175 +0.4 1.1 hypothetical protein compare
Atu5196 +0.4 1.6 hypothetical protein compare
Atu1642 +0.4 1.2 hypothetical protein compare
Atu2368 +0.4 0.6 hypothetical protein compare
Atu3809 +0.4 1.7 oxidoreductase compare
Atu1871 +0.4 1.5 glutathione S-transferase compare
Atu1285 +0.4 2.2 metal dependent hydrolase compare
Atu1260 +0.4 0.9 hypothetical protein compare
Atu0364 +0.4 2.3 ribokinase compare
Atu2248 +0.4 2.3 hypothetical protein compare
Atu1838 +0.4 1.8 ABC transporter, substrate binding protein (amino acid) compare
Atu0435 +0.4 0.6 tRNA-Gly compare
Atu0972 +0.4 2.3 lipA protein compare
Atu0049 +0.4 1.3 hypothetical protein compare
Atu4053 +0.4 0.5 succinoglycan biosynthesis protein compare
Atu4144 +0.4 0.6 hypothetical protein compare
Atu5425 +0.4 2.3 2-hydroxychromene-2-carboxylate isomerase compare
Atu5501 +0.4 1.2 hypothetical protein compare
Atu0577 +0.4 1.5 FLAF protein compare
Atu1722 +0.4 1.4 hypothetical protein compare
Atu1754 +0.4 0.9 hypothetical protein compare
Atu5119 +0.4 3.1 two component response regulator compare
Atu5430 +0.4 0.6 hypothetical protein compare
Atu2381 +0.4 1.8 hypothetical protein compare
Atu3566 +0.4 1.5 hypothetical protein compare
Atu4019 +0.4 2.7 two component response regulator compare
Atu0295 +0.4 1.4 hypothetical protein compare
Atu0906 +0.4 2.1 Hemolysin III compare
Atu8010 +0.4 2.2 hypothetical protein compare
Atu4450 +0.4 2.2 sugar ABC transporter ATPase compare
Atu0601 +0.4 2.2 oxidoreductase compare
Atu1149 +0.3 0.8 adenylate cyclase compare
Atu5493 +0.3 1.7 hypothetical protein compare
Atu6133 +0.3 1.7 conserved hypothetical protein compare
Atu1639 +0.3 2.3 hypothetical protein compare
Atu2272 +0.3 1.4 hypothetical protein compare
Atu8025 +0.3 0.7 hypothetical protein compare
Atu5195 +0.3 2.5 LysR family transcriptional regulator compare
Atu2489 +0.3 1.9 hypothetical protein compare
Atu6072 +0.3 2.3 thermophilic desulfurizing enzyme compare
Atu2810 +0.3 2.5 cobalamin biosynthetic protein compare
Atu1993 +0.3 2.1 tRNA/rRNA metyltransferase compare
Atu0548 +0.3 2.6 flagellar L-ring protein precursor compare
Atu3583 +0.3 1.9 hypothetical protein compare
Atu5034 +0.3 0.7 hypothetical protein compare
Atu4223 +0.3 1.1 sarcosine oxidase delta subunit compare
Atu0888 +0.3 2.0 transcriptional regulator, MerR family compare
Atu0762 +0.3 1.6 hypothetical protein compare
Atu8036 +0.3 1.5 protein YBGT-like protein compare
Atu8046 +0.3 1.1 hypothetical protein compare
Atu0413 +0.3 1.0 stress induced protein compare
Atu5126 +0.3 2.7 ABC transporter nucleotide binding/ATPase(putrescine) compare
Atu6173 +0.3 1.5 component of type IV secretion system compare
Atu1216 +0.3 1.9 alanyl-tRNA synthetase compare
Atu5128 +0.3 2.5 ABC transporter membrane spanning protein (mannopine) compare
Atu4499 +0.3 1.1 hypothetical protein compare
Atu4214 +0.3 1.1 cold shock protein compare
Atu2200 +0.3 1.5 cold shock protein compare
Atu1113 +0.3 1.9 dehydrogenase compare
Atu0572 +0.3 1.2 hypothetical protein compare
Atu1410 +0.3 1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu6100 +0.3 1.7 conserved hypothetical protein compare
Atu2662 +0.3 0.7 acetyltransferase compare
Atu5470 +0.3 1.1 hypothetical protein compare
Atu2737 +0.3 1.7 oxidoredutase compare
Atu1756 +0.3 1.5 hypothetical protein compare
Atu5164 +0.3 0.4 type IV secretion protein AvhB3 compare
Atu6106 +0.3 1.4 conserved hypothetical protein compare
Atu0876 +0.3 0.6 superoxide dismutase compare
Atu8057 +0.3 1.6 hypothetical protein compare
Atu4763 +0.3 1.7 AsnC family transcriptional regulator compare
Atu2729 +0.3 1.0 hypothetical protein compare
Atu5415 +0.3 1.9 hypothetical protein compare
Atu1203 +0.3 1.1 hypothetical protein compare
Atu3523 +0.3 1.7 polysaccharide biosynthesis-like protein compare
Atu1068 +0.3 1.6 hypothetical protein compare
Atu3652 +0.3 2.2 hypothetical protein compare
Atu1520 +0.3 2.1 ABC transporter, nucleotide binding/ATPase protein (zinc) compare
Atu1052 +0.3 1.4 hypothetical protein compare
Atu0777 +0.3 0.4 hypothetical protein compare
Atu1896 +0.3 1.7 hypothetical protein compare
Atu1083 +0.3 1.9 hypothetical protein compare
Atu0471 +0.3 1.3 hypothetical protein compare
Atu2084 +0.3 0.4 hypothetical protein compare
Atu1509 +0.3 1.9 hypothetical protein compare
Atu1133 +0.3 1.9 ribonuclease compare
Atu0495 +0.3 1.2 hypothetical protein compare
Atu2629 +0.3 1.9 hypothetical protein compare
Atu1638 +0.3 1.9 hypothetical protein compare
Atu1709 +0.3 1.7 glycosyl hydrolase compare
Atu8124 +0.3 1.7 hypothetical protein compare
Atu4897 +0.3 0.8 hypothetical protein compare
Atu4050 +0.3 0.8 UTP-glucose-1-phosphate uridylyltransferase compare
Atu1343 +0.3 1.5 hypothetical protein compare
Atu0538 +0.3 1.0 hypothetical protein compare
Atu1253 +0.3 1.8 hypothetical protein compare
Atu1517 +0.3 1.6 hypothetical protein compare
Atu0907 +0.3 1.2 Phosphinothricin acetyltransferase compare
Atu2275 +0.3 1.8 hypothetical protein compare
Atu6086 +0.3 1.6 ABC transporter, membrane spanning protein (nitrate/sulfonate) compare
Atu3610 +0.3 1.6 transporter compare
Atu1021 +0.3 0.8 outer membrane protein compare
Atu3369 +0.3 1.6 hypothetical protein compare
Atu0871 +0.3 1.3 branched-chain-amino-acid aminotransferase compare
Atu2069 +0.3 1.5 hypothetical protein compare
Atu0939 +0.3 1.4 PemI protein compare
Atu3491 +0.3 1.3 hypothetical protein compare
Atu3648 +0.3 1.2 hypothetical protein compare
Atu5517 +0.3 1.1 hypothetical protein compare
Atu0587 +0.3 1.5 teichoic acid biosynthesis protein compare
Atu3152 +0.3 1.5 AraC family transcriptional regulator compare
Atu4100 +0.3 1.6 hypothetical protein compare
Atu0369 +0.3 1.1 hypothetical protein compare
Atu2708 +0.3 1.5 MFS permease compare
Atu1736 +0.3 2.0 manganese transport protein compare
Atu3015 +0.3 1.6 hypothetical protein compare
Atu1781 +0.3 1.1 hypothetical protein compare
Atu4671 +0.3 1.1 response regulator compare
Atu3392 +0.3 1.1 methyltransferase compare
Atu4882 +0.3 0.6 hypothetical protein compare
Atu0193 +0.3 1.3 glutamine synthetase compare
Atu1627 +0.3 1.6 ATP-dependent Clp protease, proteolytic subunit compare
Atu4321 +0.3 2.1 ribose ABC transporter ATPase compare
Atu2334 +0.3 1.8 hypothetical protein compare
Atu0513 +0.3 1.7 hypothetical protein compare
Atu1629 +0.3 0.5 transcriptional regulator, ArsR family compare


Specific Phenotypes

For 19 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Agrobacterium fabrum C58

For carbon source N-Acetyl-D-Glucosamine across organisms