Experiment set14IT015 for Agrobacterium fabrum C58

Compare to:

Methyl beta-D-glucopyranoside carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu4685 +1.5 11.7 LacI family transcriptional regulator compare
Atu5164 +1.2 1.4 type IV secretion protein AvhB3 compare
Atu1522 +1.2 9.5 transcriptional regulator, LacI family compare
Atu1219 +1.0 1.7 hypothetical protein compare
Atu0784 +0.9 2.2 hypothetical protein compare
Atu4897 +0.9 3.2 hypothetical protein compare
Atu4053 +0.9 2.2 succinoglycan biosynthesis protein compare
Atu5489 +0.9 2.4 hypothetical protein compare
Atu3009 +0.9 2.0 exopolysaccharide production protein compare
Atu5430 +0.8 1.1 hypothetical protein compare
Atu3598 +0.8 1.3 thiol:disulfide interchange protein compare
Atu8162 +0.7 1.7 hypothetical protein compare
Atu2130 +0.7 3.1 hypothetical protein compare
Atu3603 +0.7 2.6 two component response regulator compare
Atu2249 +0.7 1.3 hypothetical protein compare
Atu8159 +0.7 1.6 hypothetical protein compare
Atu5088 +0.6 1.2 hypothetical protein compare
Atu1734 +0.6 2.1 hypothetical protein compare
Atu6098 +0.6 0.4 transcriptional regulator, HTH family compare
Atu6165 +0.6 1.1 hypothetical protein compare
Atu3775 +0.6 1.7 hypothetical protein compare
Atu3313 +0.6 2.5 hypothetical protein compare
Atu2662 +0.6 1.2 acetyltransferase compare
Atu2041 +0.5 1.2 acetyltransferase compare
Atu5155 +0.5 2.5 MarR family transcriptional regulator compare
Atu5196 +0.5 2.5 hypothetical protein compare
Atu2120 +0.5 2.6 O-methyltransferase compare
Atu5142 +0.5 0.9 hypothetical protein compare
Atu5515 +0.5 2.3 hypothetical protein compare
Atu3510 +0.5 2.3 amidohydrolase compare
Atu0986 +0.5 1.0 hypothetical protein compare
Atu2344 +0.5 1.4 lactoylglutathione lyase compare
Atu2163 +0.5 1.0 hypothetical protein compare
Atu2354 +0.5 2.3 transcriptional regulator, MarR family compare
Atu1980 +0.5 1.7 hypothetical protein compare
Atu1889 +0.5 2.1 diacylglycerol kinase compare
Atu2526 +0.5 2.6 hypothetical protein compare
Atu3467 +0.5 1.9 hypothetical protein compare
Atu0048 +0.4 3.4 hypothetical protein compare
Atu0976 +0.4 0.9 cycL protein compare
Atu8017 +0.4 1.2 hypothetical protein compare
Atu3521 +0.4 1.7 permease compare
Atu5493 +0.4 1.7 hypothetical protein compare
Atu3152 +0.4 2.6 AraC family transcriptional regulator compare
Atu8018 +0.4 0.7 hypothetical protein compare
Atu5161 +0.4 2.5 hypothetical protein compare
Atu1501 +0.4 1.3 hypothetical protein compare
Atu0063 +0.4 2.0 ABC transporter, substrate binding protein (sugar) compare
Atu2783 +0.4 1.9 acetyltransferase compare
Atu8170 +0.4 2.0 hypothetical protein compare
Atu4763 +0.4 1.5 AsnC family transcriptional regulator compare
Atu0141 +0.4 0.9 cytochrome O ubiquinol oxidase subunit I compare
Atu4468 +0.4 2.5 iron transport ABC transporter permease compare
Atu0777 +0.4 0.6 hypothetical protein compare
Atu8094 +0.4 1.8 hypothetical protein compare
Atu1344 +0.4 1.3 hypothetical protein compare
Atu3429 +0.4 0.8 hypothetical protein compare
Atu5455 +0.4 1.1 hypothetical protein compare
Atu0812 +0.4 1.5 hypothetical protein compare
Atu0749 +0.4 1.4 biotin synthesis BioY protein compare
Atu1229 +0.4 1.7 hypothetical protein compare
Atu0684 +0.4 1.6 hypothetical protein compare
Atu2077 +0.4 1.4 DNA polymerase III, epsilon subunit compare
Atu0674 +0.4 1.3 hypothetical protein compare
Atu2394 +0.4 1.2 Regulator of Biofilm formation, Fnr Family compare
Atu2729 +0.4 1.6 hypothetical protein compare
Atu3492 +0.4 1.6 sugar kinase compare
Atu5130 +0.4 1.5 attachment protein compare
Atu0876 +0.4 0.9 superoxide dismutase compare
Atu0939 +0.4 1.7 PemI protein compare
Atu3164 +0.4 2.0 sorbitol dehydrogenase compare
Atu6125 +0.4 1.5 conjugative transfer protein, Dtr system compare
Atu0583 +0.4 2.7 hypothetical protein compare
Atu1781 +0.4 2.4 hypothetical protein compare
Atu6159 +0.4 1.6 hypothetical protein compare
Atu5141 +0.4 1.8 AraC family transcriptional regulator compare
Atu0530 +0.4 1.6 UDP-galactose 4-epimerase compare
Atu2432 +0.4 1.3 hypothetical protein compare
Atu1311 +0.4 2.1 acetyltransferase compare
Atu5131 +0.4 2.1 ABC transporter nucleotide binding/ATPase compare
Atu0381 +0.3 1.5 hypothetical protein compare
Atu1906 +0.3 2.6 ABC transporter, membrane spanning protein compare
Atu3491 +0.3 1.3 hypothetical protein compare
Atu1846 +0.3 0.7 hypothetical protein compare
Atu5167 +0.3 1.3 type IV secretion protein AvhB6 compare
Atu1237 +0.3 2.6 glycosyl transferase compare
Atu6189 +0.3 0.5 protein secretion chaperone compare
Atu1726 +0.3 1.3 hypothetical protein compare
Atu5513 +0.3 0.5 cold shock protein compare
Atu1629 +0.3 0.7 transcriptional regulator, ArsR family compare
Atu8087 +0.3 0.5 putative peptidoglycan binding protein compare
Atu1888 +0.3 2.5 two component sensor kinase compare
Atu5087 +0.3 2.1 two component sensor kinase compare
Atu5429 +0.3 1.1 transcriptional regulator compare
Atu8035 +0.3 0.9 hypothetical protein compare
Atu1722 +0.3 1.6 hypothetical protein compare
Atu1680 +0.3 2.1 peptidyl prolyl cis-trans isomerase compare
Atu0696 +0.3 1.9 phosphatase compare
Atu1531 +0.3 1.8 hypothetical protein compare
Atu5150 +0.3 1.6 glutathione S-transferase compare
Atu0815 +0.3 0.8 hypothetical protein compare
Atu5160 +0.3 1.1 transcriptional regulator protein compare
Atu0843 +0.3 2.7 P type cation (metal) transporter, ATPase component compare
Atu4134 +0.3 1.3 hypothetical protein compare
Atu0382 +0.3 1.5 hypothetical protein compare
Atu0795 +0.3 0.7 hypothetical protein compare
Atu8200 +0.3 1.6 hypothetical protein compare
Atu2357 +0.3 2.1 hypothetical protein compare
Atu8032 +0.3 1.3 hypothetical protein compare
Atu1515 +0.3 2.0 hypothetical protein compare
Atu0874 +0.3 0.8 acetyltransferase compare
Atu0630 +0.3 1.1 hypothetical protein compare
Atu0225 +0.3 0.4 hypothetical protein compare
Atu3270 +0.3 1.7 hypothetical protein compare
Atu2251 +0.3 1.9 NTP pyrophosphohydrolase, MutT family compare
Atu8010 +0.3 1.2 hypothetical protein compare
Atu8012 +0.3 0.8 hypothetical protein compare
Atu5129 +0.3 2.2 ABC transporter substrate binding protein (mannopine) compare
Atu0898 +0.3 1.9 hypothetical protein compare
Atu1423 +0.3 1.4 hypothetical protein compare
Atu2737 +0.3 1.5 oxidoredutase compare
Atu3052 +0.3 1.5 MarR family transcriptional regulator compare
Atu0498 +0.3 1.4 hypothetical protein compare
Atu2800 +0.3 0.9 precorrin-3B C17-methyltransferase compare
Atu1777 +0.3 1.6 hypothetical protein compare
Atu0212 +0.3 1.4 hypothetical protein compare
Atu5171 +0.3 1.6 type IV secretion protein AvhB10 compare
Atu0744 +0.3 1.0 hypothetical protein compare
Atu3788 +0.3 1.5 potassium-transporting ATPase subunit C compare
Atu5204 +0.3 1.8 aldehyde dehydrogenase compare
Atu6117 +0.3 1.6 NTP pyrophosphohydrolase, MutT family compare
Atu4671 +0.3 1.3 response regulator compare
Atu4214 +0.3 1.7 cold shock protein compare
Atu5089 +0.3 1.9 hypothetical protein compare
Atu5166 +0.3 1.1 type IV secretion protein AvhB5 compare
Atu3627 +0.3 1.1 hypothetical protein compare
Atu0899 +0.3 2.0 dihydrodipicolinate synthase compare
Atu1558 +0.3 1.8 permease compare
Atu4481 +0.3 1.5 LacI family transcriptional regulator compare
Atu0888 +0.3 2.1 transcriptional regulator, MerR family compare
Atu3120 +0.3 0.4 hypothetical protein compare
Atu1396 +0.3 2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu1325 +0.3 1.0 acetyltransferase compare
Atu6157 +0.3 1.7 conserved hypothetical protein compare
Atu4753 +0.3 1.0 amino acid ABC transporter permease compare
Atu2318 +0.3 1.8 L-lactate dehydrogenase compare
Atu5061 +0.3 1.4 glycerophosphoryl diester phosphodiesterase compare
Atu1836 +0.3 0.8 hypothetical protein compare
Atu0560 +0.3 2.4 flagellar motor protein compare
Atu0955 +0.3 1.2 hypothetical protein compare
Atu4756 +0.3 1.9 hypothetical protein compare
Atu2116 +0.3 0.9 hypothetical protein compare
Atu0920 +0.3 1.6 hypothetical protein compare
Atu0107 +0.3 1.1 hypothetical protein compare
Atu3864 +0.3 1.3 hypothetical protein compare
Atu6053 +0.3 1.5 conserved hypothetical protein compare
Atu2259 +0.3 1.1 MFS permease compare
Atu5421 +0.3 1.8 ABC transporter membrane spanning protein (putrescine) compare
Atu1872 +0.3 1.4 hypothetical protein compare
Atu0892 +0.3 1.9 hypothetical protein compare
Atu6103 +0.3 2.1 plasmid partitioning protein compare
Atu0528 +0.3 1.0 large conductance mechanosensitive channel protein compare
Atu1314 +0.3 1.6 transcriptional regulator, TetR family compare
Atu3849 +0.3 2.3 resolvase compare
Atu5467 +0.3 1.0 hypothetical protein compare
Atu4285 +0.3 1.4 S-adenosylmethionine:2-demethylmenaquinone methyltransferase compare
Atu0582 +0.3 2.3 flagellar biosynthetic protein FLIR compare
Atu6072 +0.3 1.6 thermophilic desulfurizing enzyme compare
Atu5095 +0.3 1.1 hypothetical protein compare
Atu2148 +0.3 1.5 ABC transporter, membrane spanning protein compare
Atu0249 +0.3 1.8 ABC transporter, substrate binding protein (sugar) compare
Atu4443 +0.3 1.6 hypothetical protein compare
Atu1343 +0.3 1.4 hypothetical protein compare
Atu0804 +0.3 1.9 proton/glutamate transport protein compare
Atu0120 +0.3 1.6 hypothetical protein compare
Atu4267 +0.3 1.6 hypothetical protein compare
Atu8096 +0.3 0.8 hypothetical protein compare
Atu5094 +0.3 1.8 ISL3 family transposase compare
Atu1570 +0.3 0.4 hypothetical protein compare
Atu2144 +0.3 1.5 hypothetical protein compare
Atu2675 +0.3 1.0 hypothetical protein compare
Atu1321 +0.3 1.1 hypothetical protein compare
Atu4801 +0.3 1.7 NAD-dependent epimerase/dehydratase compare
Atu5133 +0.3 2.1 hypothetical protein compare
Atu0983 +0.3 1.2 hypothetical protein compare
Atu0731 +0.3 1.5 divalent cation transporter compare
Atu4301 +0.3 1.7 hypothetical protein compare
Atu3085 +0.3 1.5 hydantoin racemase compare
Atu1838 +0.3 1.0 ABC transporter, substrate binding protein (amino acid) compare
Atu3158 +0.3 1.7 ABC transporter substrate binding protein compare
Atu1641 +0.3 1.3 hypothetical protein compare
Atu0907 +0.3 1.3 Phosphinothricin acetyltransferase compare
Atu4120 +0.3 1.5 mandelate racemase compare
Atu8166 +0.3 1.3 hypothetical protein compare
Atu4405 +0.3 1.3 periplasmic nitrate reductase NapE compare
Atu1997 +0.3 1.5 sulfite reductase compare
Atu3822 +0.3 1.7 hypothetical protein compare
Atu2060 +0.3 1.9 ABC transporter, substrate binding protein (glycine betaine) compare
Atu1832 +0.3 1.8 membrane protein associated metalloendopeptidase compare
Atu3216 +0.3 1.6 oligopeptide ABC transporter ATPase compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source Methyl beta-D-glucopyranoside in Agrobacterium fabrum C58

For carbon source Methyl beta-D-glucopyranoside across organisms