Experiment set14IT014 for Agrobacterium fabrum C58

Compare to:

Methyl alpha-D-glucopyranoside carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -8.2 -5.7 phosphoribosyl c-AMP cyclohydrolase compare
Atu2709 -6.6 -10.1 3-isopropylmalate dehydratase, large subunit compare
Atu0432 -6.6 -6.4 O-succinylhomoserine sulfhydrylase compare
Atu2036 -6.3 -10.5 acetolactate synthase III, large subunit compare
Atu2726 -6.3 -13.4 pyruvate carboxylase compare
Atu2264 -6.2 -9.5 2-isopropylmalate synthase compare
Atu3338 -5.9 -8.9 trehalose/maltose ABC transporter substrate-binding protein compare
Atu0099 -5.7 -8.8 prephenate dehydratase compare
Atu0038 -5.7 -5.5 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3706 -5.5 -6.6 D-3-phosphoglycerate dehydrogenase compare
Atu2791 -5.5 -7.6 3-isopropylmalate dehydrogenase compare
Atu3707 -5.5 -3.8 phosphoserine aminotransferase compare
Atu2718 -5.4 -7.4 homoserine O-succinyltransferase compare
Atu3754 -5.4 -6.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3340 -5.4 -8.9 trehalose/maltose ABC transporter permease compare
Atu1205 -5.3 -11.4 threonine dehydratase compare
Atu1075 -5.3 -3.6 amidophosphoribosyltransferase compare
Atu2650 -5.2 -10.3 glycerol-3-phosphate dehydrogenase compare
Atu2040 -5.2 -5.0 phosphoserine phosphatase compare
Atu3342 -5.1 -5.0 trehalose utilization-like protein compare
Atu1844 -5.1 -3.5 Phosphoribosylformylglycinamidine synthetase compare
Atu1588 -5.0 -10.1 homoserine dehydrogenase compare
Atu0537 -4.9 -3.4 histidinol dehydrogenase compare
Atu0678 -4.9 -4.7 histidyl-tRNA synthetase compare
Atu2790 -4.6 -2.5 3-isopropylmalate dehydratase, small subunit compare
Atu2289 -4.5 -3.1 anthranilate synthase component I and II compare
Atu1845 -4.4 -5.1 phosphoribosylformylglycinamidine synthase I compare
Atu1850 -4.3 -4.1 phosphoribosylformylglycinamidine synthetase II compare
Atu1359 -4.3 -1.8 dnaK deletion suppressor protein compare
Atu3339 -4.3 -9.1 trehalose/maltose ABC transporter permease compare
Atu1687 -4.3 -2.9 anthranilate phosphoribosyltransferase compare
Atu0679 -4.2 -5.0 ATP phosphoribosyltransferase compare
Atu3755 -4.2 -4.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1140 -3.9 -4.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3482 -3.9 -9.0 pantoate--beta-alanine ligase compare
Atu0043 -3.8 -2.6 imidazoleglycerol-phosphate dehydratase compare
Atu2747 -3.6 -11.7 hypothetical protein compare
Atu1308 -3.5 -3.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0031 -3.5 -1.4 PTS system, IIA component compare
Atu0041 -3.5 -2.4 glutamine amidotransferase compare
Atu3885 -3.4 -9.6 inositol monophosphatase compare
Atu3341 -3.3 -6.2 trehalose/maltose ABC transporter ATPase compare
Atu0486 -3.3 -2.3 dihydroorotate dehydrogenase compare
Atu0184 -3.3 -2.3 glucokinase compare
Atu0647 -3.3 -5.0 phosphoribosylamine--glycine ligase compare
Atu0039 -3.1 -2.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu2015 -3.0 -9.9 aminotransferase compare
Atu3483 -3.0 -6.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu2274 -3.0 -8.6 cation efflux system protein compare
Atu1307 -2.8 -2.7 dihydroorotase compare
Atu1141 -2.8 -4.9 Phosphoribosylglycinamide synthetase compare
Atu0040 -2.5 -1.4 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3784 -2.5 -16.9 glutamate synthase large subunit compare
Atu3343 -2.5 -7.3 trehalose utilization-like protein compare
Atu1685 -2.4 -1.4 hypothetical protein compare
Atu0400 -2.4 -2.3 orotate phosphoribosyltransferase compare
Atu3783 -2.4 -14.1 glutamate synthase subunit beta compare
Atu1688 -2.3 -1.6 indole-3-glycerol-phosphate synthase compare
Atu0017 -2.3 -1.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0399 -2.3 -1.6 dihydroorotase compare
Atu2155 -2.2 -13.8 methionine synthase compare
Atu3731 -2.1 -7.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu3739 -2.1 -2.4 phosphoglycerate kinase compare
Atu1589 -2.0 -6.6 aminotransferase, class I compare
Atu5045 -1.9 -1.8 hypothetical protein compare
Atu1570 -1.9 -1.3 hypothetical protein compare
Atu0809 -1.9 -1.9 hypothetical protein compare
Atu1456 -1.8 -6.7 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1464 -1.7 -6.4 glycine cleavage system T protein, aminomethyltransferase compare
Atu1454 -1.7 -6.2 siroheme synthase compare
Atu0298 -1.6 -2.2 orotidine 5 compare
Atu1286 -1.6 -5.7 hypothetical protein compare
Atu3469 -1.6 -1.5 phosphoglyceromutase compare
Atu1462 -1.5 -8.9 glycine cleavage system protein P2 compare
Atu0591 -1.5 -8.8 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu0723 -1.5 -1.7 FAD dependent oxidoreductase compare
Atu0086 -1.5 -1.2 ribosome-binding factor A compare
Atu0592 -1.5 -4.7 ABC transporter, membrane spanning protein compare
Atu3727 -1.4 -3.5 hypothetical protein compare
Atu0188 -1.4 -2.6 ABC transporter, membrane spanning protein (peptide) compare
Atu4711 -1.4 -4.5 two component sensor kinase compare
Atu4618 -1.4 -8.8 dTDP-rhamnose-3,5-epimerase compare
Atu0593 -1.4 -5.7 ABC transporter, membrane spanning protein compare
Atu1634 -1.4 -1.7 hypothetical protein compare
Atu2237 -1.4 -3.8 cytochrome c1 compare
Atu1495 -1.4 -2.0 hypothetical protein compare
Atu0346 -1.3 -2.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0434 -1.3 -1.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0062 -1.3 -7.1 transcriptional regulator, ROK family compare
Atu0641 -1.3 -2.8 hypothetical protein compare
Atu2183 -1.3 -7.4 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0595 -1.3 -7.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu4615 -1.3 -7.3 glucose-1-phosphate thymidylyltransferase compare
Atu4685 -1.3 -5.1 LacI family transcriptional regulator compare
Atu1463 -1.2 -3.5 glycine cleavage system component H compare
Atu3353 -1.2 -6.9 mannose-1-phosphate guanylyltransferase compare
Atu4166 -1.2 -1.3 UDP-glucose 4-epimerase compare
Atu2113 -1.2 -2.0 N-acetylmuramoyl-L-alanine amidase compare
Atu5107 -1.2 -2.2 hypothetical protein compare
Atu1457 -1.2 -2.0 hypothetical protein compare
Atu3009 -1.2 -1.3 exopolysaccharide production protein compare
Atu2532 -1.2 -3.2 transcriptional regulator, MarR family compare
Atu0030 -1.2 -1.5 phosphocarrier protein HPr compare
Atu3311 -1.2 -8.2 phosphomannose isomerase compare
Atu1030 -1.2 -1.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0594 -1.2 -6.2 alpha-glucosidase compare
Atu0598 -1.1 -4.3 phosphogluconate dehydratase compare
Atu1686 -1.1 -6.4 peptidyl-prolyl cis-trans isomerse D compare
Atu3898 -1.1 -5.3 DeoR family transcriptional regulator compare
Atu2548 -1.1 -7.7 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu4617 -1.1 -7.5 dTDP-D-glucose-4,6-dehydratase compare
Atu4743 -1.1 -5.2 LacI family transcriptional regulator compare
Atu5115 -1.1 -1.2 hypothetical protein compare
Atu2554 -1.1 -1.1 lysyl-tRNA synthetase compare
Atu2831 -1.1 -2.6 glucose inhibited division protein A compare
Atu2710 -1.1 -4.0 hypothetical protein compare
Atu4616 -1.0 -1.5 dTDP-4-dehydrorhamnose reductase compare
Atu1475 -1.0 -2.0 hypothetical protein compare
Atu0029 -1.0 -3.0 S-adenosylhomocysteine hydrolase compare
Atu0535 -1.0 -3.2 hypothetical protein compare
Atu4576 -1.0 -5.6 ROK family transcriptional regulator compare
Atu0361 -1.0 -2.1 transcriptional regulator compare
Atu1219 -1.0 -0.8 hypothetical protein compare
Atu3750 -1.0 -1.9 thiamine-phosphate pyrophosphorylase compare
Atu4614 -1.0 -6.0 glycosyltransferase compare
Atu5540 -1.0 -0.7 hypothetical protein compare
Atu1007 -1.0 -1.9 hypothetical protein compare
Atu2801 -1.0 -2.7 precorrin-2 C20 methyltransferase compare
Atu1325 -1.0 -1.2 acetyltransferase compare
Atu2740 -1.0 -2.6 transcriptional regulator, GntR family compare
Atu2238 -1.0 -4.0 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1779 -1.0 -1.8 hypothetical protein compare
Atu5125 -1.0 -2.4 GntR family transcriptional regulator compare
Atu2746 -1.0 -1.8 hypothetical protein compare
Atu1327 -1.0 -2.0 NADH-ubiquinone oxidoreductase compare
Atu0606 -0.9 -1.8 hypothetical protein compare
Atu4072 -0.9 -1.5 nodulation protein N compare
Atu3226 -0.9 -5.2 GntR family transcriptional regulator compare
Atu1009 -0.9 -2.1 hypothetical protein compare
Atu4613 -0.9 -6.5 glycosyltransferase compare
Atu4702 -0.9 -3.3 GntR family transcriptional regulator compare
Atu8082 -0.9 -1.8 hypothetical protein compare
Atu5186 -0.9 -1.4 hypothetical protein compare
Atu0770 -0.9 -3.9 cytochrome C oxidase assembly protein compare
Atu0941 -0.9 -0.7 hypothetical protein compare
Atu0771 -0.9 -4.2 cytochrome c oxidase subunit III compare
Atu8088 -0.9 -1.5 hypothetical protein compare
Atu3572 -0.9 -4.7 transcriptional regulator compare
Atu0977 -0.9 -2.5 serine protease DO-like protease compare
Atu0744 -0.9 -2.0 hypothetical protein compare
Atu0026 -0.9 -0.7 hypothetical protein compare
Atu3554 -0.9 -2.5 hypothetical protein compare
Atu0536 -0.9 -4.1 hypothetical protein compare
Atu5475 -0.9 -1.2 hypothetical protein compare
Atu1182 -0.8 -1.0 hypothetical protein compare
Atu4176 -0.8 -2.6 hypothetical protein compare
Atu2192 -0.8 -1.1 hypothetical protein compare
Atu0768 -0.8 -4.7 cytochrome-c oxidase chain I compare
Atu8154 -0.8 -2.0 Plasmid stabilization system protein compare
Atu0876 -0.8 -1.1 superoxide dismutase compare
Atu3963 -0.8 -4.0 GntR family transcriptional regulator compare
Atu8087 -0.8 -0.8 putative peptidoglycan binding protein compare
Atu0894 -0.8 -1.6 ABC transporter, membrane spanning protein compare
Atu1788 -0.8 -5.0 transcriptional regulator, GntR family compare
Atu2376 -0.8 -0.7 hypothetical protein compare
Atu3485 -0.8 -4.8 short chain dehydrogenase compare
Atu2205 -0.8 -2.4 transcriptional regulator, MarR family compare
Atu4773 -0.8 -0.9 two component response regulator compare
Atu2207 -0.8 -1.7 two component sensor kinase compare
Atu1242 -0.8 -3.4 cytochrome oxidase assembly factor compare
Atu4825 -0.8 -3.6 dehydrogenase compare
Atu0763 -0.8 -3.4 hydrolase compare
Atu2239 -0.8 -1.7 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3144 -0.8 -2.1 GntR family transcriptional regulator compare
Atu0435 -0.8 -1.4 tRNA-Gly compare
Atu2267 -0.8 -2.5 hypothetical protein compare
Atu2812 -0.7 -1.8 hypothetical protein compare
Atu4674 -0.7 -4.6 GntR family transcriptional regulator compare
Atu4405 -0.7 -1.5 periplasmic nitrate reductase NapE compare
Atu4514 -0.7 -2.3 RpiR family transcriptional regulator compare
Atu8138 -0.7 -0.8 hypothetical protein compare
Atu3486 -0.7 -1.9 DeoR family transcriptional regulator compare
Atu1714 -0.7 -1.0 exonuclease III compare
Atu0912 -0.7 -0.8 Na+/H+ antiporter compare
Atu0885 -0.7 -1.4 hypothetical protein compare
Atu8054 -0.7 -0.4 hypothetical protein compare
Atu1449 -0.7 -2.6 potassium uptake protein compare
Atu8151 -0.7 -1.3 hypothetical protein compare
Atu3532 -0.7 -2.7 GntR family transcriptional regulator compare
Atu3878 -0.7 -4.2 transcriptional regulator compare
Atu4446 -0.7 -5.2 hypothetical protein compare
Atu1031 -0.7 -1.3 hypothetical protein compare
Atu0972 -0.7 -1.9 lipA protein compare
Atu0962 -0.7 -2.9 hypothetical protein compare
Atu1526 -0.7 -3.0 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu2803 -0.7 -2.1 Cobalamin biosynthesis associated protein compare
Atu0280 -0.7 -1.2 hypothetical protein compare
Atu5136 -0.7 -1.9 transcriptional repressor of the blcABC operon compare
Atu1103 -0.7 -1.7 rRNA-adenine N6,N6-dimethyltransferase compare
Atu1074 -0.7 -3.2 NAD/NADP dependent oxidoreductase compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source Methyl alpha-D-glucopyranoside in Agrobacterium fabrum C58

For carbon source Methyl alpha-D-glucopyranoside across organisms