Experiment set14IT011 for Agrobacterium fabrum C58

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most important genes:

  gene name fitness t score description  
Atu3754 -9.8 -5.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0038 -8.4 -5.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2791 -8.2 -5.7 3-isopropylmalate dehydrogenase compare
Atu0432 -8.0 -7.8 O-succinylhomoserine sulfhydrylase compare
Atu2605 -8.0 -3.1 hypothetical protein compare
Atu1205 -8.0 -9.5 threonine dehydratase compare
Atu2036 -7.8 -9.3 acetolactate synthase III, large subunit compare
Atu0099 -7.6 -9.1 prephenate dehydratase compare
Atu2609 -7.6 -7.4 transcriptional regulator, ROK family compare
Atu1750 -7.6 -6.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu0679 -7.5 -5.2 ATP phosphoribosyltransferase compare
Atu2601 -7.4 -13.4 ABC transporter, substrate binding protein (maltose) compare
Atu2264 -7.2 -12.1 2-isopropylmalate synthase compare
Atu2709 -7.2 -15.4 3-isopropylmalate dehydratase, large subunit compare
Atu1588 -7.1 -8.4 homoserine dehydrogenase compare
Atu1845 -7.0 -4.8 phosphoribosylformylglycinamidine synthase I compare
Atu2603 -6.9 -8.2 ABC transporter, membrane spanning protein (maltose) compare
Atu1850 -6.8 -4.7 phosphoribosylformylglycinamidine synthetase II compare
Atu2718 -6.7 -8.0 homoserine O-succinyltransferase compare
Atu2602 -6.7 -10.2 ABC transporter, membrane spanning protein (maltose) compare
Atu2650 -6.6 -12.2 glycerol-3-phosphate dehydrogenase compare
Atu3706 -6.6 -6.5 D-3-phosphoglycerate dehydrogenase compare
Atu2040 -6.6 -4.6 phosphoserine phosphatase compare
Atu1140 -6.6 -6.3 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0678 -6.5 -4.5 histidyl-tRNA synthetase compare
Atu2726 -6.5 -21.4 pyruvate carboxylase compare
Atu3707 -6.5 -4.5 phosphoserine aminotransferase compare
Atu2604 -6.4 -12.4 oxidoreductase compare
Atu2600 -6.3 -8.6 ABC transporter, nucleotide binding/ATPase protein (maltose/maltodextrin) compare
Atu1844 -6.1 -4.2 Phosphoribosylformylglycinamidine synthetase compare
Atu0537 -6.0 -5.9 histidinol dehydrogenase compare
Atu1075 -5.9 -7.0 amidophosphoribosyltransferase compare
Atu2608 -5.8 -9.9 N-acetylglucosamine-6-phosphate deacetylase conserved
Atu1308 -5.8 -4.0 aspartate carbamoyl transferase catalytic subunit compare
Atu1141 -5.7 -6.8 Phosphoribosylglycinamide synthetase compare
Atu2607 -5.7 -12.5 glucosamine--fructose-6-phosphate aminotransferase conserved
Atu2289 -5.7 -3.9 anthranilate synthase component I and II compare
Atu2790 -5.4 -2.8 3-isopropylmalate dehydratase, small subunit compare
Atu1687 -5.4 -3.7 anthranilate phosphoribosyltransferase compare
Atu0043 -5.3 -3.7 imidazoleglycerol-phosphate dehydratase compare
Atu1456 -5.3 -10.8 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3885 -5.2 -10.1 inositol monophosphatase compare
Atu1359 -5.1 -2.0 dnaK deletion suppressor protein compare
Atu0041 -5.0 -3.4 glutamine amidotransferase compare
Atu3730 -5.0 -3.3 hypothetical protein compare
Atu0647 -4.9 -4.8 phosphoribosylamine--glycine ligase compare
Atu0486 -4.9 -3.4 dihydroorotate dehydrogenase compare
Atu0039 -4.7 -3.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu0400 -4.6 -3.2 orotate phosphoribosyltransferase compare
Atu1307 -4.5 -4.3 dihydroorotase compare
Atu0641 -4.4 -4.8 hypothetical protein compare
Atu1454 -4.3 -6.6 siroheme synthase compare
Atu0030 -4.2 -2.8 phosphocarrier protein HPr compare
Atu0298 -4.2 -2.9 orotidine 5 compare
Atu2274 -4.0 -10.0 cation efflux system protein compare
Atu3739 -3.9 -3.6 phosphoglycerate kinase compare
Atu0017 -3.9 -2.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu3755 -3.7 -5.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1030 -3.7 -2.4 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2747 -3.6 -14.4 hypothetical protein compare
Atu3483 -3.6 -7.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu0399 -3.6 -3.4 dihydroorotase compare
Atu0040 -3.5 -1.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0790 -3.5 -8.2 hypothetical protein compare
Atu1589 -3.5 -10.4 aminotransferase, class I compare
Atu1688 -3.5 -2.4 indole-3-glycerol-phosphate synthase compare
Atu2015 -3.5 -14.5 aminotransferase compare
Atu3482 -3.3 -6.9 pantoate--beta-alanine ligase compare
Atu1463 -3.3 -6.7 glycine cleavage system component H compare
Atu1455 -3.2 -4.8 hypothetical protein compare
Atu2155 -3.2 -17.9 methionine synthase compare
Atu2606 -3.2 -7.1 transcriptional regulator, GntR family conserved
Atu2548 -3.1 -15.9 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1462 -2.8 -12.3 glycine cleavage system protein P2 compare
Atu3469 -2.6 -3.5 phosphoglyceromutase compare
Atu6098 -2.6 -1.0 transcriptional regulator, HTH family compare
Atu1686 -2.5 -10.6 peptidyl-prolyl cis-trans isomerse D compare
Atu4711 -2.5 -8.9 two component sensor kinase compare
Atu3731 -2.4 -7.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu1685 -2.4 -1.6 hypothetical protein compare
Atu0536 -2.4 -10.6 hypothetical protein compare
Atu2113 -2.3 -5.0 N-acetylmuramoyl-L-alanine amidase compare
Atu0803 -2.2 -15.0 pyruvate,orthophosphate dikinase compare
Atu1464 -2.2 -4.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu0361 -2.1 -4.9 transcriptional regulator compare
Atu3783 -2.1 -13.5 glutamate synthase subunit beta compare
Atu0141 -2.1 -2.3 cytochrome O ubiquinol oxidase subunit I compare
Atu0047 -1.9 -10.9 malate synthase G compare
Atu0029 -1.9 -5.9 S-adenosylhomocysteine hydrolase compare
Atu3784 -1.9 -14.8 glutamate synthase large subunit compare
Atu4685 -1.8 -8.8 LacI family transcriptional regulator compare
Atu0434 -1.8 -2.8 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4618 -1.8 -10.8 dTDP-rhamnose-3,5-epimerase compare
Atu0062 -1.8 -11.6 transcriptional regulator, ROK family compare
Atu1904 -1.6 -2.4 transcriptional regulator compare
Atu2205 -1.6 -5.5 transcriptional regulator, MarR family compare
Atu0031 -1.6 -1.2 PTS system, IIA component compare
Atu3485 -1.5 -8.0 short chain dehydrogenase compare
Atu2745 -1.5 -10.3 acetyl-coenzyme A synthetase compare
Atu2183 -1.5 -8.1 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4617 -1.5 -7.2 dTDP-D-glucose-4,6-dehydratase compare
Atu1902 -1.5 -4.4 transketolase compare
Atu0346 -1.5 -3.6 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1457 -1.4 -1.8 hypothetical protein compare
Atu1225 -1.4 -2.3 hypothetical protein compare
Atu0101 -1.3 -5.2 cytochrome c compare
Atu0846 -1.3 -3.2 transcriptional regulator, MarR family compare
Atu1327 -1.3 -2.7 NADH-ubiquinone oxidoreductase compare
Atu3910 -1.3 -4.1 LamB/YcsF family protein compare
Atu1810 -1.3 -1.3 hypothetical protein compare
Atu1286 -1.3 -3.5 hypothetical protein compare
Atu2123 -1.3 -4.8 methylenetetrahydrofolate reductase compare
Atu3963 -1.2 -6.0 GntR family transcriptional regulator compare
Atu1364 -1.2 -4.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2238 -1.2 -5.1 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu3144 -1.2 -4.1 GntR family transcriptional regulator compare
Atu0723 -1.2 -2.3 FAD dependent oxidoreductase compare
Atu3908 -1.2 -7.5 GntR family transcriptional regulator compare
Atu4446 -1.1 -8.4 hypothetical protein compare
Atu4613 -1.1 -8.4 glycosyltransferase compare
Atu3121 -1.1 -1.4 cold shock protein compare
Atu4615 -1.1 -6.6 glucose-1-phosphate thymidylyltransferase compare
Atu0421 -1.1 -1.2 ABC transporter, membrane spanning protein compare
Atu4232 -1.1 -3.9 GntR family transcriptional regulator compare
Atu2376 -1.1 -0.9 hypothetical protein compare
Atu3835 -1.1 -5.1 hypothetical protein compare
Atu0205 -1.1 -6.6 methylmalonate-semialdehyde dehydrogenase compare
Atu2554 -1.1 -2.0 lysyl-tRNA synthetase compare
Atu3226 -1.1 -5.9 GntR family transcriptional regulator compare
Atu2532 -1.1 -3.5 transcriptional regulator, MarR family compare
Atu4616 -1.1 -1.7 dTDP-4-dehydrorhamnose reductase compare
Atu4614 -1.1 -4.9 glycosyltransferase compare
Atu3311 -1.1 -7.0 phosphomannose isomerase compare
Atu1103 -1.1 -3.0 rRNA-adenine N6,N6-dimethyltransferase compare
Atu4505 -1.0 -5.8 LacI family transcriptional regulator compare
Atu4029 -1.0 -3.8 gluconolactonase compare
Atu3572 -1.0 -6.7 transcriptional regulator compare
Atu0817 -1.0 -5.4 sulfate adenylate transferase, subunit 2 compare
Atu3337 -1.0 -6.0 LacI family transcriptional regulator compare
Atu3763 -1.0 -1.3 hypothetical protein compare
Atu5125 -1.0 -3.2 GntR family transcriptional regulator compare
Atu0606 -1.0 -2.4 hypothetical protein compare
Atu1074 -1.0 -5.5 NAD/NADP dependent oxidoreductase compare
Atu0818 -1.0 -5.2 phosphoadenosine phosphosulfate reductase compare
Atu3353 -1.0 -6.7 mannose-1-phosphate guanylyltransferase compare
Atu3162 -1.0 -6.1 LacI family transcriptional regulator compare
Atu0816 -1.0 -6.5 sulfate adenylate transferase, subunit 1 compare
Atu4514 -1.0 -4.1 RpiR family transcriptional regulator compare
Atu0607 -0.9 -7.3 isocitrate lyase compare
Atu3075 -0.9 -4.4 TetR family transcriptional regulator compare
Atu0690 -0.9 -1.8 hypothetical protein compare
Atu4541 -0.9 -3.4 carboxymuconolactone decarboxylase compare
Atu1683 -0.9 -1.6 hypothetical protein compare
Atu0768 -0.9 -6.0 cytochrome-c oxidase chain I compare
Atu5124 -0.9 -6.6 glutamate-1-semialdehyde aminotransferase compare
Atu1062 -0.9 -1.7 phosphatidylserine synthase compare
Atu0769 -0.9 -1.2 protoheme IX farnesyltransferase compare
Atu0035 -0.8 -5.2 phosphoenolpyruvate carboxykinase compare
Atu2832 -0.8 -2.0 tRNA modification GTPase compare
Atu1242 -0.8 -4.6 cytochrome oxidase assembly factor compare
Atu1546 -0.8 -3.1 transcriptional regulator, MerR family compare
Atu3913 -0.8 -4.5 biotin carboxylase compare
Atu0188 -0.8 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu2057 -0.8 -1.8 DNA helicase II compare
Atu3532 -0.8 -3.1 GntR family transcriptional regulator compare
Atu1163 -0.8 -0.9 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0422 -0.8 -1.4 ABC transporter, membrane spanning protein compare
Atu3295 -0.8 -2.4 hypothetical protein compare
Atu2209 -0.8 -3.3 pyrroline-5-carboxylate reductase compare
Atu1760 -0.8 -1.1 hypothetical protein compare
Atu0608 -0.8 -5.9 transcriptional regulator compare
Atu4099 -0.8 -3.3 hypothetical protein compare
Atu0824 -0.8 -1.0 hypothetical protein compare
Atu5464 -0.8 -4.5 IclR family transcriptional regulator compare
Atu0291 -0.8 -4.9 hypothetical protein compare
Atu3115 -0.8 -3.0 TetR family transcriptional regulator compare
Atu0598 -0.8 -3.5 phosphogluconate dehydratase compare
Atu1182 -0.8 -1.1 hypothetical protein compare
Atu3598 -0.8 -0.9 thiol:disulfide interchange protein compare
Atu3898 -0.8 -3.3 DeoR family transcriptional regulator compare
Atu1891 -0.8 -2.0 cobalamin biosynthesis protein compare
Atu0516 -0.8 -2.5 chemotaxis receiver protein compare
Atu0770 -0.7 -4.1 cytochrome C oxidase assembly protein compare
Atu4317 -0.7 -1.8 TetR family transcriptional regulator compare
Atu0836 -0.7 -1.8 Glutathione-S-transferase compare
Atu2740 -0.7 -3.2 transcriptional regulator, GntR family compare
Atu5540 -0.7 -0.8 hypothetical protein compare
Atu1592 -0.7 -3.5 hypothetical protein compare
Atu3794 -0.7 -3.8 FadR family transcriptional regulator compare
Atu3727 -0.7 -2.2 hypothetical protein compare
Atu4674 -0.7 -4.7 GntR family transcriptional regulator compare
Atu4873 -0.7 -2.6 TetR family transcriptional regulator compare
Atu2379 -0.7 -5.5 phosphomannomutase compare
Atu0331 -0.7 -1.5 sigma-54 modulation protein compare
Atu2821 -0.7 -3.6 transcriptional regulator, GntR family compare
Atu4364 -0.7 -3.7 LacI family transcriptional regulator compare
Atu2237 -0.7 -2.9 cytochrome c1 compare
Atu4530 -0.7 -1.9 TetR family transcriptional regulator compare
Atu3750 -0.7 -2.2 thiamine-phosphate pyrophosphorylase compare
Atu4418 -0.7 -2.1 glutaryl-CoA dehydrogenase compare


Specific Phenotypes

For 21 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Agrobacterium fabrum C58

For carbon source N-Acetyl-D-Glucosamine across organisms