Experiment set14IT011 for Agrobacterium fabrum C58

Compare to:

N-Acetyl-D-Glucosamine carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu2598 +4.0 29.5 transcriptional regulator, RpiR family compare
Atu3577 +3.2 24.6 transcriptional regulator conserved
Atu3928 +2.0 16.9 hypothetical protein compare
Atu8181 +1.4 8.1 hypothetical protein compare
Atu2593 +1.1 8.5 copper homeostasis protein compare
Atu2595 +1.1 8.6 hypothetical protein compare
Atu2596 +1.1 8.6 beta-N-acetylhexosaminidase compare
Atu5164 +1.0 1.2 type IV secretion protein AvhB3 compare
Atu2594 +1.0 6.7 MFS permease compare
Atu5121 +0.8 6.2 two component response regulator compare
Atu0888 +0.8 2.8 transcriptional regulator, MerR family compare
Atu0645 +0.8 0.8 hypothetical protein compare
Atu1446 +0.8 0.9 two component response regulator compare
Atu5163 +0.8 1.7 type IV secretion protein AvhB2 compare
Atu0026 +0.8 1.2 hypothetical protein compare
Atu4884 +0.7 4.1 hypothetical protein compare
Atu2597 +0.7 6.1 short-chain dehydrogenase compare
Atu2746 +0.7 3.5 hypothetical protein compare
Atu0142 +0.7 1.9 cytochrome o ubiquinol oxidase subunit II compare
Atu1888 +0.7 4.8 two component sensor kinase compare
Atu2163 +0.6 1.3 hypothetical protein compare
Atu5430 +0.6 0.8 hypothetical protein compare
Atu2125 +0.6 1.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu2368 +0.6 1.2 hypothetical protein compare
Atu3017 +0.6 1.3 phosphoglyceromutase compare
Atu4896 +0.6 1.8 acetyltransferase compare
Atu0777 +0.6 0.9 hypothetical protein compare
Atu1021 +0.6 1.5 outer membrane protein compare
Atu2157 +0.6 3.0 tyrosine/serine protein phosphatase compare
Atu3266 +0.5 3.5 dihydroorotase compare
Atu8023 +0.5 1.5 hypothetical protein compare
Atu3005 +0.5 0.8 hypothetical protein compare
Atu0184 +0.5 1.7 glucokinase compare
Atu3566 +0.5 2.8 hypothetical protein compare
Atu3032 +0.5 1.7 hypothetical protein compare
Atu0377 +0.5 1.9 hypothetical protein compare
Atu2354 +0.5 2.6 transcriptional regulator, MarR family compare
Atu2484 +0.5 0.7 hypothetical protein compare
Atu5451 +0.5 0.9 hypothetical protein compare
Atu1077 +0.5 1.8 DNA repair protein compare
Atu5196 +0.5 2.4 hypothetical protein compare
Atu1566 +0.5 0.8 hypothetical protein compare
Atu0485 +0.5 1.7 hypothetical protein compare
Atu5475 +0.5 1.8 hypothetical protein compare
Atu1527 +0.4 1.6 nitrogen fixation protein FixS compare
Atu4095 +0.4 1.3 hypothetical protein compare
Atu4033 +0.4 3.1 sugar ABC transporter substrate-binding protein compare
Atu8057 +0.4 2.0 hypothetical protein compare
Atu1978 +0.4 2.0 hypothetical protein compare
Atu0986 +0.4 0.8 hypothetical protein compare
Atu1302 +0.4 1.5 hypothetical protein compare
Atu1558 +0.4 1.8 permease compare
Atu0843 +0.4 3.7 P type cation (metal) transporter, ATPase component compare
Atu4034 +0.4 3.3 two component sensor kinase compare
Atu1628 +0.4 2.0 hypothetical protein compare
Atu3423 +0.4 1.1 hypothetical protein compare
Atu1285 +0.4 2.9 metal dependent hydrolase compare
Atu0576 +0.4 3.8 flagellar hook-associated protein compare
Atu3491 +0.4 1.1 hypothetical protein compare
Atu3011 +0.4 1.2 ArsR family transcriptional regulator compare
Atu1249 +0.4 2.0 hypothetical protein compare
Atu8032 +0.4 1.4 hypothetical protein compare
Atu2432 +0.4 1.2 hypothetical protein compare
Atu8168 +0.4 1.2 hypothetical protein compare
Atu4869 +0.4 1.7 hypothetical protein compare
Atu2676 +0.4 1.7 4a-hydroxytetrahydrobiopterin dehydratase compare
Atu4894 +0.4 2.4 transposase compare
Atu2130 +0.4 1.8 hypothetical protein compare
Atu1213 +0.4 0.7 hypothetical protein compare
Atu4214 +0.4 1.8 cold shock protein compare
Atu2249 +0.4 0.7 hypothetical protein compare
Atu4887 +0.4 1.7 hypothetical protein compare
Atu3844 +0.4 2.6 hypothetical protein compare
Atu4879 +0.4 2.4 hypothetical protein compare
Atu2329 +0.4 1.9 hypothetical protein compare
Atu8158 +0.4 1.3 hypothetical protein compare
Atu1968 +0.4 1.0 hypothetical protein compare
Atu0119 +0.4 0.8 hypothetical protein compare
Atu4406 +0.4 1.7 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu4159 +0.4 1.1 AsnC family transcriptional regulator compare
Atu1836 +0.4 1.2 hypothetical protein compare
Atu1500 +0.4 2.1 rare lipoprotein A compare
Atu4893 +0.4 2.1 hypothetical protein compare
Atu3331 +0.4 1.7 hypothetical protein compare
Atu2729 +0.4 0.9 hypothetical protein compare
Atu6153 +0.4 1.6 conserved hypothetical protein compare
Atu1048 +0.4 1.9 ABC transporter, membrane spanning protein compare
Atu0201 +0.4 1.2 hypothetical protein compare
Atu0601 +0.4 2.5 oxidoreductase compare
Atu5142 +0.4 0.7 hypothetical protein compare
Atu4803 +0.4 1.8 two component response regulator compare
Atu2406 +0.4 1.5 hypothetical protein compare
Atu4035 +0.4 2.7 two component response regulator compare
Atu4437 +0.4 1.5 LysR family transcriptional regulator compare
Atu0524 +0.4 2.8 transcriptional regulator, LuxR family compare
Atu8085 +0.4 1.9 hypothetical protein compare
Atu0993 +0.4 2.1 transcriptional regulator, TetR family compare
Atu2620 +0.4 0.8 hypothetical protein compare
Atu1578 +0.4 2.4 ABC transporter, membrane spanning protein (amino acid) compare
Atu2793 +0.4 1.7 cobyrinic acid a,c-diamide synthase compare
Atu0805 +0.4 2.3 hypothetical protein compare
Atu5119 +0.4 2.9 two component response regulator compare
Atu3120 +0.4 0.6 hypothetical protein compare
Atu4607 +0.4 2.3 sugar acetylase compare
Atu8170 +0.4 1.1 hypothetical protein compare
Atu2146 +0.4 1.5 hypothetical protein compare
Atu3645 +0.4 2.0 hypothetical protein compare
Atu6189 +0.4 0.6 protein secretion chaperone compare
Atu3015 +0.4 2.1 hypothetical protein compare
Atu0874 +0.4 1.5 acetyltransferase compare
Atu2041 +0.4 1.1 acetyltransferase compare
Atu1301 +0.4 1.1 hypothetical protein compare
Atu0185 +0.4 2.0 methylglyoxal synthase compare
Atu2069 +0.4 2.2 hypothetical protein compare
Atu4888 +0.4 1.5 hypothetical protein compare
Atu2399 +0.3 1.4 hypothetical protein compare
Atu0572 +0.3 0.7 hypothetical protein compare
Atu2662 +0.3 0.4 acetyltransferase compare
Atu3026 +0.3 2.1 short chain dehydrogenase compare
Atu4245 +0.3 1.7 polyamine ABC transporter permease compare
Atu0627 +0.3 2.1 carboxymethylenebutenolidase compare
Atu6072 +0.3 2.2 thermophilic desulfurizing enzyme compare
Atu3604 +0.3 1.2 hypoxanthine phosphoribosyltransferase compare
Atu2733 +0.3 1.2 hypothetical protein compare
Atu0086 +0.3 0.3 ribosome-binding factor A compare
Atu4897 +0.3 0.9 hypothetical protein compare
Atu5167 +0.3 1.5 type IV secretion protein AvhB6 compare
Atu0577 +0.3 1.6 FLAF protein compare
Atu1466 +0.3 0.7 hypothetical protein compare
Atu6096 +0.3 1.6 conserved hypothetical protein compare
Atu1643 +0.3 1.8 hypothetical protein compare
Atu2777 +0.3 2.0 hypothetical protein compare
Atu0815 +0.3 1.2 hypothetical protein compare
Atu0540 +0.3 0.6 hypothetical protein compare
Atu0544 +0.3 1.0 hypothetical protein compare
Atu3472 +0.3 1.2 2-oxoisovalerate dehydrogenase subunit beta compare
Atu4237 +0.3 1.2 hypothetical protein compare
Atu2394 +0.3 1.5 Regulator of Biofilm formation, Fnr Family compare
Atu8130 +0.3 2.4 hypothetical protein compare
Atu2349 +0.3 0.9 hypothetical protein compare
Atu3016 +0.3 2.1 phosphoglyceromutase compare
Atu2042 +0.3 1.7 short chain dehydrogenase compare
Atu4405 +0.3 1.4 periplasmic nitrate reductase NapE compare
Atu6067 +0.3 1.7 conserved hypothetical protein compare
Atu4019 +0.3 1.7 two component response regulator compare
Atu1856 +0.3 2.0 inositol monophosphatase family protein compare
Atu0879 +0.3 1.7 RhtB family transporter compare
Atu1415 +0.3 1.9 3-hydroxyacyl-CoA dehydrogenase type II compare
Atu1869 +0.3 2.1 hypothetical protein compare
Atu4892 +0.3 2.6 hypothetical protein compare
Atu2489 +0.3 1.6 hypothetical protein compare
Atu5515 +0.3 1.1 hypothetical protein compare
Atu1734 +0.3 0.9 hypothetical protein compare
Atu5129 +0.3 2.5 ABC transporter substrate binding protein (mannopine) compare
Atu1007 +0.3 1.0 hypothetical protein compare
Atu4457 +0.3 1.9 endonuclease III compare
Atu5115 +0.3 0.5 hypothetical protein compare
Atu0130 +0.3 1.3 cytidine deaminase compare
Atu2059 +0.3 1.9 transcriptional regulator, TetR family compare
Atu5172 +0.3 2.1 type IV secretion protein AvhB11 compare
Atu0364 +0.3 2.0 ribokinase compare
Atu3006 +0.3 1.3 hypothetical protein compare
Atu1125 +0.3 1.1 ABC transporter, membrane spanning protein compare
Atu0073 +0.3 1.8 recF-like protein compare
Atu0095 +0.3 1.4 hypothetical protein compare
Atu0283 +0.3 2.2 hypothetical protein compare
Atu3853 +0.3 1.5 hypothetical protein compare
Atu0847 +0.3 2.0 organic hydroperoxide resistance protein compare
Atu3009 +0.3 0.4 exopolysaccharide production protein compare
Atu5128 +0.3 2.2 ABC transporter membrane spanning protein (mannopine) compare
Atu1325 +0.3 1.1 acetyltransferase compare
Atu3778 +0.3 1.5 UTP-glucose-1-phosphate uridylyltransferase compare
Atu4880 +0.3 2.1 AraC family transcriptional regulator compare
Atu1260 +0.3 0.6 hypothetical protein compare
Atu0943 +0.3 0.9 hypothetical protein compare
Atu2200 +0.3 1.0 cold shock protein compare
Atu0179 +0.3 1.8 hypothetical protein compare
Atu3539 +0.3 1.2 hypothetical protein compare
Atu0525 +0.3 1.4 transcriptional regulator, LuxR family compare
Atu5061 +0.3 1.3 glycerophosphoryl diester phosphodiesterase compare
Atu0167 +0.3 1.5 transcriptional regulator, AraC family compare
Atu8157 +0.3 1.4 hypothetical protein compare
Atu2436 +0.3 1.3 hypothetical protein compare
Atu0332 +0.3 1.7 RNA polymerase sigma-54 factor compare
Atu1882 +0.3 1.0 usg protein compare
Atu4171 +0.3 1.5 cold-shock dead-box protein A compare
Atu2752 +0.3 1.5 hypothetical protein compare
Atu0262 +0.3 1.7 acetyltransferase compare
Atu4267 +0.3 1.0 hypothetical protein compare
Atu5057 +0.3 0.5 hypothetical protein compare
Atu0731 +0.3 1.6 divalent cation transporter compare
Atu1336 +0.3 1.2 hypothetical protein compare
Atu1722 +0.3 0.9 hypothetical protein compare
Atu3583 +0.3 1.2 hypothetical protein compare
Atu4050 +0.3 1.1 UTP-glucose-1-phosphate uridylyltransferase compare
Atu0890 +0.3 1.7 hypothetical protein compare
Atu1754 +0.3 0.5 hypothetical protein compare
Atu0413 +0.3 0.6 stress induced protein compare
Atu4838 +0.3 1.4 outer membrane lipoprotein compare
Atu2075 +0.3 1.5 chemotaxis protein compare


Specific Phenotypes

For 20 genes in this experiment

For carbon source N-Acetyl-D-Glucosamine in Agrobacterium fabrum C58

For carbon source N-Acetyl-D-Glucosamine across organisms