Experiment set14IT009 for Agrobacterium fabrum C58

Compare to:

methyl 3-keto-a-D-glucopyranoside carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -7.7 -6.8 phosphoribosyl c-AMP cyclohydrolase compare
Atu2791 -7.5 -7.3 3-isopropylmalate dehydrogenase compare
Atu2264 -7.4 -11.3 2-isopropylmalate synthase compare
Atu0432 -7.4 -8.8 O-succinylhomoserine sulfhydrylase compare
Atu2726 -7.3 -17.7 pyruvate carboxylase compare
Atu2036 -7.2 -12.1 acetolactate synthase III, large subunit compare
Atu2709 -6.9 -15.5 3-isopropylmalate dehydratase, large subunit compare
Atu0099 -6.9 -12.4 prephenate dehydratase compare
Atu1850 -6.8 -4.7 phosphoribosylformylglycinamidine synthetase II compare
Atu1075 -6.8 -4.7 amidophosphoribosyltransferase compare
Atu3706 -6.7 -6.5 D-3-phosphoglycerate dehydrogenase compare
Atu1205 -6.6 -14.9 threonine dehydratase compare
Atu2040 -6.6 -4.6 phosphoserine phosphatase compare
Atu3707 -6.6 -4.5 phosphoserine aminotransferase compare
Atu2718 -6.6 -10.0 homoserine O-succinyltransferase compare
Atu1141 -6.5 -6.3 Phosphoribosylglycinamide synthetase compare
Atu2274 -6.5 -9.4 cation efflux system protein compare
Atu1140 -6.4 -4.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu0678 -6.3 -6.1 histidyl-tRNA synthetase compare
Atu1844 -6.2 -4.3 Phosphoribosylformylglycinamidine synthetase compare
Atu1588 -6.1 -11.7 homoserine dehydrogenase compare
Atu1308 -5.9 -4.1 aspartate carbamoyl transferase catalytic subunit compare
Atu2650 -5.9 -12.4 glycerol-3-phosphate dehydrogenase compare
Atu0679 -5.9 -9.0 ATP phosphoribosyltransferase compare
Atu0537 -5.8 -6.9 histidinol dehydrogenase compare
Atu3754 -5.6 -4.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2289 -5.5 -5.4 anthranilate synthase component I and II compare
Atu2790 -5.5 -3.0 3-isopropylmalate dehydratase, small subunit compare
Atu1845 -5.4 -4.4 phosphoribosylformylglycinamidine synthase I compare
Atu3885 -5.4 -10.4 inositol monophosphatase compare
Atu0647 -5.4 -3.7 phosphoribosylamine--glycine ligase compare
Atu0043 -5.3 -3.7 imidazoleglycerol-phosphate dehydratase compare
Atu3342 -5.2 -7.2 trehalose utilization-like protein compare
Atu1687 -5.2 -5.1 anthranilate phosphoribosyltransferase compare
Atu1359 -5.2 -2.1 dnaK deletion suppressor protein compare
Atu0038 -5.1 -5.7 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0041 -4.9 -3.4 glutamine amidotransferase compare
Atu2747 -4.9 -12.2 hypothetical protein compare
Atu0486 -4.9 -3.4 dihydroorotate dehydrogenase compare
Atu3755 -4.8 -6.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0039 -4.6 -3.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu0184 -4.6 -3.2 glucokinase compare
Atu1307 -4.4 -4.2 dihydroorotase compare
Atu2015 -4.3 -16.2 aminotransferase compare
Atu3338 -4.0 -11.3 trehalose/maltose ABC transporter substrate-binding protein conserved
Atu0298 -3.9 -3.8 orotidine 5 compare
Atu0017 -3.8 -2.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0400 -3.8 -3.7 orotate phosphoribosyltransferase compare
Atu0399 -3.8 -2.6 dihydroorotase compare
Atu1030 -3.8 -2.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1688 -3.6 -2.5 indole-3-glycerol-phosphate synthase compare
Atu0040 -3.5 -2.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3340 -3.4 -10.3 trehalose/maltose ABC transporter permease compare
Atu3482 -3.3 -7.0 pantoate--beta-alanine ligase compare
Atu0723 -3.2 -3.7 FAD dependent oxidoreductase compare
Atu3339 -3.2 -7.6 trehalose/maltose ABC transporter permease conserved
Atu3739 -3.2 -1.9 phosphoglycerate kinase compare
Atu0641 -3.1 -5.3 hypothetical protein compare
Atu3469 -3.0 -3.5 phosphoglyceromutase compare
Atu3341 -3.0 -7.3 trehalose/maltose ABC transporter ATPase compare
Atu3483 -2.9 -7.4 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3783 -2.8 -14.3 glutamate synthase subunit beta compare
Atu1686 -2.7 -10.8 peptidyl-prolyl cis-trans isomerse D compare
Atu2548 -2.7 -17.7 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu1456 -2.7 -10.8 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu1589 -2.5 -6.3 aminotransferase, class I compare
Atu3784 -2.4 -18.2 glutamate synthase large subunit compare
Atu3731 -2.3 -8.7 5-formyltetrahydrofolate cyclo-ligase compare
Atu0346 -2.1 -4.9 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0598 -2.1 -8.6 phosphogluconate dehydratase compare
Atu0030 -2.1 -2.8 phosphocarrier protein HPr compare
Atu2684 -2.1 -2.3 hypothetical protein compare
Atu1454 -2.0 -5.4 siroheme synthase compare
Atu2155 -2.0 -14.3 methionine synthase compare
Atu4711 -2.0 -6.4 two component sensor kinase compare
Atu1685 -2.0 -1.6 hypothetical protein compare
Atu4375 -2.0 -10.0 hypothetical protein compare
Atu8054 -1.9 -1.1 hypothetical protein compare
Atu3730 -1.8 -1.7 hypothetical protein compare
Atu1455 -1.7 -2.2 hypothetical protein compare
Atu1457 -1.7 -2.2 hypothetical protein compare
Atu4618 -1.7 -10.3 dTDP-rhamnose-3,5-epimerase compare
Atu5125 -1.6 -4.5 GntR family transcriptional regulator compare
Atu1620 -1.6 -7.9 triosephosphate isomerase compare
Atu1463 -1.6 -6.2 glycine cleavage system component H compare
Atu0031 -1.6 -1.2 PTS system, IIA component compare
Atu0029 -1.6 -4.6 S-adenosylhomocysteine hydrolase compare
Atu0876 -1.5 -2.0 superoxide dismutase compare
Atu0062 -1.5 -7.6 transcriptional regulator, ROK family compare
Atu3353 -1.5 -8.7 mannose-1-phosphate guanylyltransferase compare
Atu4374 -1.5 -7.0 hypothetical protein compare
Atu1462 -1.4 -10.5 glycine cleavage system protein P2 compare
Atu4372 -1.4 -6.1 ribose ABC transporter permease compare
Atu4369 -1.4 -7.6 sugar ABC transporter substrate-binding protein compare
Atu1464 -1.4 -4.5 glycine cleavage system T protein, aminomethyltransferase compare
Atu1446 -1.3 -1.2 two component response regulator compare
Atu2020 -1.3 -1.8 transcriptional regulator, TetR family compare
Atu4514 -1.2 -2.5 RpiR family transcriptional regulator compare
Atu2183 -1.2 -6.8 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4373 -1.2 -3.3 LacI family transcriptional regulator compare
Atu4370 -1.2 -6.8 sugar ABC transporter ATPase compare
Atu4317 -1.2 -2.3 TetR family transcriptional regulator compare
Atu2209 -1.2 -4.4 pyrroline-5-carboxylate reductase compare
Atu3727 -1.2 -3.9 hypothetical protein compare
Atu4614 -1.2 -7.4 glycosyltransferase compare
Atu0185 -1.2 -0.9 methylglyoxal synthase compare
Atu4615 -1.1 -7.6 glucose-1-phosphate thymidylyltransferase compare
Atu4617 -1.1 -5.5 dTDP-D-glucose-4,6-dehydratase compare
Atu3311 -1.1 -9.0 phosphomannose isomerase compare
Atu8087 -1.1 -1.3 putative peptidoglycan binding protein compare
Atu4613 -1.1 -7.3 glycosyltransferase compare
Atu4166 -1.0 -2.4 UDP-glucose 4-epimerase compare
Atu4616 -1.0 -1.7 dTDP-4-dehydrorhamnose reductase compare
Atu4630 -1.0 -2.3 hypothetical protein compare
Atu1526 -0.9 -4.8 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu2205 -0.9 -2.1 transcriptional regulator, MarR family compare
Atu2017 -0.9 -1.4 hypothetical protein compare
Atu8115 -0.9 -3.0 Hypothetical Protein compare
Atu8162 -0.9 -1.3 hypothetical protein compare
Atu5115 -0.9 -1.5 hypothetical protein compare
Atu0086 -0.9 -0.9 ribosome-binding factor A compare
Atu2821 -0.9 -4.2 transcriptional regulator, GntR family compare
Atu0941 -0.8 -0.9 hypothetical protein compare
Atu2239 -0.8 -1.2 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2831 -0.8 -3.1 glucose inhibited division protein A compare
Atu1952 -0.8 -1.2 hypothetical protein compare
Atu3532 -0.8 -4.0 GntR family transcriptional regulator compare
Atu0354 -0.8 -1.6 ferric uptake regulator compare
Atu1518 -0.8 -2.5 transcriptional regulator, Fur family compare
Atu1339 -0.8 -1.8 ribonuclease E compare
Atu2063 -0.8 -1.8 hypothetical protein compare
Atu4371 -0.8 -4.6 sugar ABC transporter permease compare
Atu0595 -0.8 -4.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu4472 -0.8 -1.5 hypothetical protein compare
Atu1076 -0.7 -3.2 colicin V production protein compare
Atu2335 -0.7 -1.2 hypothetical protein compare
Atu3878 -0.7 -4.5 transcriptional regulator compare
Atu4743 -0.7 -3.2 LacI family transcriptional regulator compare
Atu3963 -0.7 -3.8 GntR family transcriptional regulator compare
Atu3486 -0.7 -2.1 DeoR family transcriptional regulator compare
Atu2113 -0.7 -2.1 N-acetylmuramoyl-L-alanine amidase compare
Atu4502 -0.7 -3.5 cobalamin synthesis protein compare
Atu4176 -0.7 -2.8 hypothetical protein compare
Atu2832 -0.7 -2.0 tRNA modification GTPase compare
Atu0205 -0.7 -4.3 methylmalonate-semialdehyde dehydrogenase compare
Atu0592 -0.7 -3.4 ABC transporter, membrane spanning protein compare
Atu3898 -0.6 -3.0 DeoR family transcriptional regulator compare
Atu5501 -0.6 -1.8 hypothetical protein compare
Atu0886 -0.6 -0.9 hypothetical protein compare
Atu4173 -0.6 -1.8 phosphoenolpyruvate-protein phosphotransferase compare
Atu5124 -0.6 -4.6 glutamate-1-semialdehyde aminotransferase compare
Atu5540 -0.6 -0.7 hypothetical protein compare
Atu1546 -0.6 -2.2 transcriptional regulator, MerR family compare
Atu3712 -0.6 -1.4 hypothetical protein compare
Atu4540 -0.6 -1.2 protocatechuate 3,4-dioxygenase subunit beta compare
Atu1182 -0.6 -1.3 hypothetical protein compare
Atu0591 -0.6 -4.2 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu6045 -0.6 -1.0 replication protein C compare
Atu2237 -0.6 -2.1 cytochrome c1 compare
Atu4446 -0.6 -3.5 hypothetical protein compare
Atu0769 -0.6 -0.8 protoheme IX farnesyltransferase compare
Atu2136 -0.6 -3.1 chromosome partitioning protein compare
Atu4187 -0.6 -1.1 tRNA-Met compare
Atu2125 -0.6 -0.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu5145 -0.6 -2.0 acetyltransferase compare
Atu8063 -0.6 -1.6 hypothetical protein compare
Atu3485 -0.6 -4.0 short chain dehydrogenase compare
Atu0419 -0.6 -1.7 two component sensor kinase compare
Atu0972 -0.6 -3.4 lipA protein compare
Atu3572 -0.6 -3.0 transcriptional regulator compare
Atu1223 -0.6 -0.9 hypothetical protein compare
Atu2555 -0.6 -2.3 L-lysine 2,3-aminomutase compare
Atu1904 -0.6 -2.8 transcriptional regulator compare
Atu1810 -0.6 -0.7 hypothetical protein compare
Atu0328 -0.6 -3.6 heat-inducible transcription repressor compare
Atu0953 -0.6 -0.7 hypothetical protein compare
Atu6153 -0.5 -1.4 conserved hypothetical protein compare
Atu0413 -0.5 -1.5 stress induced protein compare
Atu2740 -0.5 -3.2 transcriptional regulator, GntR family compare
Atu4541 -0.5 -2.3 carboxymuconolactone decarboxylase compare
Atu1149 -0.5 -1.0 adenylate cyclase compare
Atu4576 -0.5 -2.8 ROK family transcriptional regulator compare
Atu3115 -0.5 -2.7 TetR family transcriptional regulator compare
Atu1760 -0.5 -0.8 hypothetical protein compare
Atu0477 -0.5 -0.7 hypothetical protein compare
Atu0460 -0.5 -3.2 hypothetical protein compare
Atu0786 -0.5 -1.7 peptidase, family M16 compare
Atu1570 -0.5 -0.7 hypothetical protein compare
Atu1232 -0.5 -1.0 hypothetical protein compare
Atu1327 -0.5 -1.5 NADH-ubiquinone oxidoreductase compare
Atu2176 -0.5 -2.0 hypothetical protein compare
Atu0768 -0.5 -3.5 cytochrome-c oxidase chain I compare
Atu0101 -0.5 -1.2 cytochrome c compare
Atu2439 -0.5 -0.8 hypothetical protein compare
Atu2221 -0.5 -1.8 Lipid A biosynthesis protein compare
Atu0999 -0.5 -3.0 magnesium transport protein compare
Atu1754 -0.5 -1.0 hypothetical protein compare
Atu2728 -0.5 -2.1 beta (1-->2) glucan export ATP-binding protein compare
Atu1444 -0.5 -1.8 nitrogen regulation protein compare
Atu4838 -0.5 -2.9 outer membrane lipoprotein compare


Specific Phenotypes

For 11 genes in this experiment

For carbon source methyl 3-keto-a-D-glucopyranoside in Agrobacterium fabrum C58

For carbon source methyl 3-keto-a-D-glucopyranoside across organisms