Experiment set14IT007 for Agrobacterium fabrum C58

Compare to:

Methyl beta-D-glucopyranoside carbon source

200 most important genes:

  gene name fitness t score description  
Atu0099 -8.6 -5.9 prephenate dehydratase compare
Atu2264 -7.9 -9.4 2-isopropylmalate synthase compare
Atu2709 -7.8 -15.8 3-isopropylmalate dehydratase, large subunit compare
Atu3754 -7.8 -5.7 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2036 -7.5 -12.6 acetolactate synthase III, large subunit compare
Atu2791 -7.3 -8.7 3-isopropylmalate dehydrogenase compare
Atu1845 -7.2 -5.0 phosphoribosylformylglycinamidine synthase I compare
Atu1750 -7.1 -6.3 phosphoribosyl c-AMP cyclohydrolase compare
Atu2726 -7.1 -22.2 pyruvate carboxylase compare
Atu1205 -7.0 -14.2 threonine dehydratase compare
Atu1850 -7.0 -4.8 phosphoribosylformylglycinamidine synthetase II compare
Atu0679 -6.8 -8.2 ATP phosphoribosyltransferase compare
Atu1075 -6.8 -4.7 amidophosphoribosyltransferase compare
Atu2040 -6.8 -4.7 phosphoserine phosphatase compare
Atu3707 -6.8 -4.7 phosphoserine aminotransferase compare
Atu0038 -6.7 -6.8 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu1844 -6.4 -4.4 Phosphoribosylformylglycinamidine synthetase compare
Atu2650 -6.2 -11.8 glycerol-3-phosphate dehydrogenase compare
Atu3706 -6.1 -9.3 D-3-phosphoglycerate dehydrogenase compare
Atu1588 -5.9 -12.1 homoserine dehydrogenase compare
Atu2289 -5.9 -4.1 anthranilate synthase component I and II compare
Atu0537 -5.9 -7.0 histidinol dehydrogenase compare
Atu2790 -5.7 -2.9 3-isopropylmalate dehydratase, small subunit compare
Atu1140 -5.6 -5.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1141 -5.6 -7.6 Phosphoribosylglycinamide synthetase compare
Atu0678 -5.5 -7.6 histidyl-tRNA synthetase compare
Atu2718 -5.5 -11.6 homoserine O-succinyltransferase compare
Atu3739 -5.5 -2.8 phosphoglycerate kinase compare
Atu1687 -5.3 -5.2 anthranilate phosphoribosyltransferase compare
Atu1359 -5.2 -2.0 dnaK deletion suppressor protein compare
Atu0041 -5.1 -3.5 glutamine amidotransferase compare
Atu0432 -5.1 -10.4 O-succinylhomoserine sulfhydrylase compare
Atu2747 -5.1 -15.5 hypothetical protein compare
Atu3885 -5.1 -10.3 inositol monophosphatase compare
Atu1685 -5.0 -1.9 hypothetical protein compare
Atu1308 -4.9 -4.8 aspartate carbamoyl transferase catalytic subunit compare
Atu0647 -4.9 -5.9 phosphoribosylamine--glycine ligase compare
Atu2274 -4.8 -9.0 cation efflux system protein compare
Atu0039 -4.8 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu0184 -4.8 -3.3 glucokinase compare
Atu0043 -4.7 -4.6 imidazoleglycerol-phosphate dehydratase compare
Atu3755 -4.6 -7.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0486 -4.4 -4.3 dihydroorotate dehydrogenase compare
Atu1307 -4.2 -4.1 dihydroorotase compare
Atu0400 -4.2 -4.1 orotate phosphoribosyltransferase compare
Atu2015 -4.1 -12.8 aminotransferase compare
Atu0298 -4.0 -3.9 orotidine 5 compare
Atu0017 -4.0 -2.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu2548 -4.0 -21.2 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0399 -3.9 -2.7 dihydroorotase compare
Atu4369 -3.9 -15.3 sugar ABC transporter substrate-binding protein compare
Atu1686 -3.8 -14.7 peptidyl-prolyl cis-trans isomerse D compare
Atu0641 -3.8 -5.3 hypothetical protein compare
Atu1688 -3.7 -2.6 indole-3-glycerol-phosphate synthase compare
Atu0040 -3.6 -2.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0185 -3.3 -7.2 methylglyoxal synthase compare
Atu4370 -3.3 -14.7 sugar ABC transporter ATPase compare
Atu4372 -3.1 -9.6 ribose ABC transporter permease compare
Atu3483 -3.1 -7.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu1456 -3.1 -13.1 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu4371 -3.0 -12.3 sugar ABC transporter permease compare
Atu3482 -3.0 -8.3 pantoate--beta-alanine ligase compare
Atu1589 -3.0 -10.7 aminotransferase, class I compare
Atu1620 -3.0 -11.4 triosephosphate isomerase compare
Atu3240 -2.9 -10.1 ROK family transcriptional regulator compare
Atu4075 -2.8 -11.2 glycogen synthase compare
Atu0598 -2.8 -9.8 phosphogluconate dehydratase compare
Atu1030 -2.6 -2.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3731 -2.6 -11.9 5-formyltetrahydrofolate cyclo-ligase compare
Atu1454 -2.6 -6.3 siroheme synthase compare
Atu4375 -2.6 -12.0 hypothetical protein compare
Atu3783 -2.5 -12.0 glutamate synthase subunit beta compare
Atu4373 -2.4 -10.2 LacI family transcriptional regulator compare
Atu2155 -2.4 -15.8 methionine synthase compare
Atu1464 -2.3 -6.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu1463 -2.2 -7.1 glycine cleavage system component H compare
Atu3784 -2.2 -17.2 glutamate synthase large subunit compare
Atu3469 -2.2 -3.4 phosphoglyceromutase compare
Atu0422 -2.1 -2.0 ABC transporter, membrane spanning protein compare
Atu4374 -2.1 -8.0 hypothetical protein compare
Atu1462 -2.1 -14.5 glycine cleavage system protein P2 compare
Atu0029 -2.0 -7.5 S-adenosylhomocysteine hydrolase compare
Atu0346 -2.0 -4.1 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0354 -1.9 -2.9 ferric uptake regulator compare
Atu1446 -1.9 -1.3 two component response regulator compare
Atu4711 -1.9 -6.3 two component sensor kinase compare
Atu1455 -1.9 -2.1 hypothetical protein compare
Atu4166 -1.8 -2.8 UDP-glucose 4-epimerase compare
Atu1570 -1.8 -1.6 hypothetical protein compare
Atu0030 -1.5 -2.5 phosphocarrier protein HPr compare
Atu8115 -1.5 -4.1 Hypothetical Protein compare
Atu1445 -1.4 -4.1 two component sensor kinase compare
Atu0971 -1.4 -3.5 two component sensor kinase compare
Atu0723 -1.4 -1.8 FAD dependent oxidoreductase compare
Atu1526 -1.3 -8.3 6-phosphogluconate dehydrogenase, decarboxylating compare
Atu0332 -1.3 -5.8 RNA polymerase sigma-54 factor compare
Atu1163 -1.3 -1.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4618 -1.3 -8.0 dTDP-rhamnose-3,5-epimerase compare
Atu2209 -1.2 -3.0 pyrroline-5-carboxylate reductase compare
Atu0086 -1.2 -1.3 ribosome-binding factor A compare
Atu4617 -1.2 -9.1 dTDP-D-glucose-4,6-dehydratase compare
Atu3012 -1.2 -2.2 hypothetical protein compare
Atu4616 -1.2 -2.2 dTDP-4-dehydrorhamnose reductase compare
Atu0361 -1.2 -2.5 transcriptional regulator compare
Atu5115 -1.2 -1.5 hypothetical protein compare
Atu2113 -1.1 -2.7 N-acetylmuramoyl-L-alanine amidase compare
Atu3468 -1.1 -1.0 hypothetical protein compare
Atu0421 -1.1 -1.3 ABC transporter, membrane spanning protein compare
Atu2183 -1.1 -4.6 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu2125 -1.1 -1.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu4613 -1.1 -7.4 glycosyltransferase compare
Atu3121 -1.1 -1.1 cold shock protein compare
Atu3348 -1.0 -5.0 hypothetical protein compare
Atu4615 -1.0 -6.0 glucose-1-phosphate thymidylyltransferase compare
Atu8087 -1.0 -1.3 putative peptidoglycan binding protein compare
Atu0434 -1.0 -1.9 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1457 -1.0 -1.6 hypothetical protein compare
Atu3353 -1.0 -6.1 mannose-1-phosphate guanylyltransferase compare
Atu4614 -1.0 -6.1 glycosyltransferase compare
Atu2123 -1.0 -4.0 methylenetetrahydrofolate reductase compare
Atu4317 -1.0 -2.7 TetR family transcriptional regulator compare
Atu1683 -1.0 -3.0 hypothetical protein compare
Atu0977 -1.0 -3.3 serine protease DO-like protease compare
Atu1604 -0.9 -6.3 poly-beta-hydroxybutyrate synthase compare
Atu3763 -0.9 -1.2 hypothetical protein compare
Atu3001 -0.9 -3.1 hypothetical protein compare
Atu2205 -0.9 -4.6 transcriptional regulator, MarR family compare
Atu2832 -0.9 -2.3 tRNA modification GTPase compare
Atu3311 -0.9 -6.5 phosphomannose isomerase compare
Atu1327 -0.9 -2.8 NADH-ubiquinone oxidoreductase compare
Atu5125 -0.9 -2.4 GntR family transcriptional regulator compare
Atu8154 -0.9 -1.9 Plasmid stabilization system protein compare
Atu3496 -0.9 -4.0 hypothetical protein compare
Atu2057 -0.8 -1.6 DNA helicase II compare
Atu3337 -0.8 -4.6 LacI family transcriptional regulator compare
Atu1339 -0.8 -1.8 ribonuclease E compare
Atu0533 -0.8 -1.8 putative inhibitor of septum formation compare
Atu3730 -0.8 -1.3 hypothetical protein compare
Atu1760 -0.8 -1.2 hypothetical protein compare
Atu0769 -0.8 -1.1 protoheme IX farnesyltransferase compare
Atu2442 -0.8 -2.3 hypothetical protein compare
Atu5028 -0.8 -1.7 IS426 transposase compare
Atu4896 -0.8 -2.1 acetyltransferase compare
Atu2831 -0.7 -3.4 glucose inhibited division protein A compare
Atu2554 -0.7 -1.3 lysyl-tRNA synthetase compare
Atu1175 -0.7 -1.4 hypothetical protein compare
Atu0031 -0.7 -0.7 PTS system, IIA component compare
Atu0606 -0.7 -1.7 hypothetical protein compare
Atu8052 -0.7 -1.1 hypothetical protein compare
Atu0401 -0.7 -3.9 fructokinase compare
Atu1056 -0.7 -3.6 hypothetical protein compare
Atu0943 -0.7 -1.2 hypothetical protein compare
Atu3750 -0.7 -2.2 thiamine-phosphate pyrophosphorylase compare
Atu2239 -0.7 -2.2 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3963 -0.7 -4.2 GntR family transcriptional regulator compare
Atu1470 -0.7 -0.8 Camphor resistance protein compare
Atu2200 -0.7 -2.4 cold shock protein compare
Atu3775 -0.7 -1.6 hypothetical protein compare
Atu4502 -0.7 -3.4 cobalamin synthesis protein compare
Atu1323 -0.7 -2.0 hypothetical protein compare
Atu0188 -0.7 -1.9 ABC transporter, membrane spanning protein (peptide) compare
Atu4079 -0.7 -1.9 hypothetical protein compare
Atu1475 -0.6 -2.4 hypothetical protein compare
Atu0536 -0.6 -3.3 hypothetical protein compare
Atu6114 -0.6 -1.3 hypothetical protein compare
Atu8088 -0.6 -1.8 hypothetical protein compare
Atu8176 -0.6 -1.4 hypothetical protein compare
Atu1677 -0.6 -2.6 queuine tRNA-ribosyltransferase compare
Atu2020 -0.6 -1.9 transcriptional regulator, TetR family compare
Atu8138 -0.6 -0.8 hypothetical protein compare
Atu3485 -0.6 -3.9 short chain dehydrogenase compare
Atu0767 -0.6 -3.4 cytochrome c oxidase subunit II compare
Atu0190 -0.6 -3.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3604 -0.6 -0.7 hypoxanthine phosphoribosyltransferase compare
Atu0047 -0.6 -4.8 malate synthase G compare
Atu0205 -0.6 -4.2 methylmalonate-semialdehyde dehydrogenase compare
Atu0026 -0.6 -0.7 hypothetical protein compare
Atu2640 -0.6 -2.6 hypothetical protein compare
Atu5511 -0.6 -2.2 hypothetical protein compare
Atu1546 -0.6 -2.4 transcriptional regulator, MerR family compare
Atu1629 -0.6 -0.9 transcriptional regulator, ArsR family compare
Atu3732 -0.6 -3.0 hemolysin compare
Atu2376 -0.6 -0.4 hypothetical protein compare
Atu1495 -0.6 -1.4 hypothetical protein compare
Atu3727 -0.6 -2.4 hypothetical protein compare
Atu3008 -0.6 -0.8 hypothetical protein compare
Atu3572 -0.5 -2.8 transcriptional regulator compare
Atu4541 -0.5 -2.2 carboxymuconolactone decarboxylase compare
Atu1076 -0.5 -2.0 colicin V production protein compare
Atu0272 -0.5 -1.7 transcriptional regulator, MarR family compare
Atu3122 -0.5 -1.7 cold shock protein compare
Atu1904 -0.5 -1.3 transcriptional regulator compare
Atu4217 -0.5 -0.9 TetR family transcriptional regulator compare
Atu2187 -0.5 -2.2 transcriptional regulator, ArsR family compare
Atu3352 -0.5 -3.8 sugar ABC transporter substrate-binding protein compare
Atu2324 -0.5 -1.7 ureidoglycolate hydrolase compare
Atu0786 -0.5 -2.7 peptidase, family M16 compare
Atu1447 -0.5 -1.8 two component sensor kinase compare
Atu4346 -0.5 -2.2 hypothetical protein compare
Atu6173 -0.5 -1.7 component of type IV secretion system compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source Methyl beta-D-glucopyranoside in Agrobacterium fabrum C58

For carbon source Methyl beta-D-glucopyranoside across organisms