Experiment set14IT007 for Agrobacterium fabrum C58

Compare to:

Methyl beta-D-glucopyranoside carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu5164 +1.4 1.8 type IV secretion protein AvhB3 compare
Atu4685 +1.0 7.2 LacI family transcriptional regulator compare
Atu5430 +1.0 1.7 hypothetical protein compare
Atu1522 +1.0 7.3 transcriptional regulator, LacI family compare
Atu0912 +0.7 1.6 Na+/H+ antiporter compare
Atu8034 +0.7 3.4 hypothetical protein compare
Atu1149 +0.7 1.5 adenylate cyclase compare
Atu1213 +0.7 2.1 hypothetical protein compare
Atu5455 +0.6 1.6 hypothetical protein compare
Atu2433 +0.6 1.3 hypothetical protein compare
Atu1302 +0.5 1.7 hypothetical protein compare
Atu0824 +0.5 1.1 hypothetical protein compare
Atu1679 +0.5 2.1 peptidyl prolyl cis-trans isomerase compare
Atu1980 +0.5 1.2 hypothetical protein compare
Atu1098 +0.5 1.5 hypothetical protein compare
Atu1737 +0.5 2.0 hypothetical protein compare
Atu0986 +0.5 1.0 hypothetical protein compare
Atu4144 +0.5 0.9 hypothetical protein compare
Atu8145 +0.5 1.7 hypothetical protein compare
Atu6159 +0.5 1.8 hypothetical protein compare
Atu1082 +0.5 2.6 branched-chain amino acid permease compare
Atu0381 +0.5 1.2 hypothetical protein compare
Atu0340 +0.5 1.4 SAM dependent methyltransferase compare
Atu6106 +0.5 1.5 conserved hypothetical protein compare
Atu0784 +0.4 0.8 hypothetical protein compare
Atu4869 +0.4 1.7 hypothetical protein compare
Atu2140 +0.4 0.9 hypothetical protein compare
Atu2041 +0.4 1.0 acetyltransferase compare
Atu0580 +0.4 1.1 flagellar biosynthetic protein compare
Atu2344 +0.4 1.3 lactoylglutathione lyase compare
Atu3011 +0.4 1.6 ArsR family transcriptional regulator compare
Atu3634 +0.4 2.1 penicillin-binding protein dacf precursor compare
Atu2249 +0.4 0.8 hypothetical protein compare
Atu0562 +0.4 1.2 flagellar motor switch protein FliN compare
Atu5162 +0.4 1.8 type IV secretion protein AvhB1 compare
Atu1437 +0.4 2.0 hypothetical protein compare
Atu5473 +0.4 2.1 D-alanine aminotransferase compare
Atu1897 +0.4 1.7 short chain dehydrogenase compare
Atu5196 +0.4 1.6 hypothetical protein compare
Atu8170 +0.4 1.3 hypothetical protein compare
Atu0827 +0.4 2.4 hypothetical protein compare
Atu5140 +0.4 2.2 hypothetical protein compare
Atu4897 +0.4 0.9 hypothetical protein compare
Atu4437 +0.4 1.7 LysR family transcriptional regulator compare
Atu3911 +0.4 1.5 hypothetical protein compare
Atu3095 +0.4 1.2 hypothetical protein compare
Atu5045 +0.4 1.1 hypothetical protein compare
Atu4486 +0.4 2.3 nitroreductase compare
Atu0843 +0.4 3.2 P type cation (metal) transporter, ATPase component compare
Atu0749 +0.4 1.3 biotin synthesis BioY protein compare
Atu8155 +0.4 2.3 hypothetical protein compare
Atu0961 +0.4 1.6 hypothetical protein compare
Atu1871 +0.4 1.4 glutathione S-transferase compare
Atu0941 +0.4 0.6 hypothetical protein compare
Atu2600 +0.4 2.1 ABC transporter, nucleotide binding/ATPase protein (maltose/maltodextrin) compare
Atu3158 +0.4 2.8 ABC transporter substrate binding protein compare
Atu3583 +0.4 1.8 hypothetical protein compare
Atu1682 +0.4 2.1 hypothetical protein compare
Atu4747 +0.4 2.2 sugar ABC transporter permease compare
Atu3864 +0.4 1.8 hypothetical protein compare
Atu3492 +0.4 1.3 sugar kinase compare
Atu5148 +0.3 1.7 hypothetical protein compare
Atu4443 +0.3 2.0 hypothetical protein compare
Atu1264 +0.3 1.1 hypothetical protein compare
Atu1884 +0.3 2.1 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu1039 +0.3 1.3 DNA repair protein RecO compare
Atu6107 +0.3 1.5 hypothetical protein compare
Atu0193 +0.3 1.9 glutamine synthetase compare
Atu0547 +0.3 1.8 flagellar protein compare
Atu5130 +0.3 1.2 attachment protein compare
Atu0885 +0.3 1.3 hypothetical protein compare
Atu3393 +0.3 1.3 pseudoazurin compare
Atu1880 +0.3 1.0 ABC transporter, membrane spanning protein (amino acid) compare
Atu0888 +0.3 2.5 transcriptional regulator, MerR family compare
Atu5141 +0.3 2.3 AraC family transcriptional regulator compare
Atu6104 +0.3 1.3 conserved hypothetical protein compare
Atu5114 +0.3 1.0 hypothetical protein compare
Atu2157 +0.3 2.0 tyrosine/serine protein phosphatase compare
Atu1577 +0.3 1.8 ABC transporter, substrate binding protein (amino acid) compare
Atu2675 +0.3 1.1 hypothetical protein compare
Atu4093 +0.3 1.4 hypothetical protein compare
Atu3235 +0.3 2.7 hypothetical protein compare
Atu5061 +0.3 1.4 glycerophosphoryl diester phosphodiesterase compare
Atu3980 +0.3 2.2 hydrolase compare
Atu0577 +0.3 1.6 FLAF protein compare
Atu4302 +0.3 1.9 hypothetical protein compare
Atu3692 +0.3 1.8 sigma factor compare
Atu3218 +0.3 1.4 hypothetical protein compare
Atu4884 +0.3 0.9 hypothetical protein compare
Atu6096 +0.3 1.7 conserved hypothetical protein compare
Atu4406 +0.3 1.5 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu4606 +0.3 2.1 hypothetical protein compare
Atu3528 +0.3 2.3 oxidoreductase compare
Atu4263 +0.3 2.3 hypothetical protein compare
Atu1628 +0.3 1.5 hypothetical protein compare
Atu8112 +0.3 2.7 hypothetical protein compare
Atu1491 +0.3 1.2 sodium bile acid symporter family protein compare
Atu6113 +0.3 1.6 conserved hypothetical protein compare
Atu3295 +0.3 1.7 hypothetical protein compare
Atu3120 +0.3 0.5 hypothetical protein compare
Atu4677 +0.3 0.8 hypothetical protein compare
Atu0645 +0.3 0.5 hypothetical protein compare
Atu3194 +0.3 1.4 acetyltransferase compare
Atu1531 +0.3 1.6 hypothetical protein compare
Atu2634 +0.3 0.9 hypothetical protein compare
Atu0036 +0.3 1.1 hypothetical protein compare
Atu0795 +0.3 0.8 hypothetical protein compare
Atu8165 +0.3 0.9 hypothetical protein compare
Atu4744 +0.3 2.1 sugar ABC transporter substrate-binding protein compare
Atu4387 +0.3 1.8 nitric oxide reductase NorQ protein compare
Atu0319 +0.3 0.6 ubiquinone biosynthesis protein compare
Atu1301 +0.3 0.9 hypothetical protein compare
Atu4724 +0.3 1.2 hypothetical protein compare
Atu6126 +0.3 1.7 conjugal transfer protein, Dtr system compare
Atu8035 +0.3 0.8 hypothetical protein compare
Atu1609 +0.3 2.1 hypothetical protein compare
Atu8181 +0.3 1.1 hypothetical protein compare
Atu2368 +0.3 0.4 hypothetical protein compare
Atu1888 +0.3 2.3 two component sensor kinase compare
Atu4469 +0.3 1.0 iron ABC transporter permease compare
Atu1466 +0.3 0.6 hypothetical protein compare
Atu5129 +0.3 2.2 ABC transporter substrate binding protein (mannopine) compare
Atu0742 +0.3 1.7 hypothetical protein compare
Atu4028 +0.3 1.4 recombination regulator RecX compare
Atu3872 +0.3 1.8 hypothetical protein compare
Atu1804 +0.3 1.5 hypothetical protein compare
Atu1550 +0.3 1.4 polypeptide deformylase compare
Atu3182 +0.3 1.2 hypothetical protein compare
Atu1639 +0.3 1.6 hypothetical protein compare
Atu4480 +0.3 1.6 hypothetical protein compare
Atu1001 +0.3 1.8 hypothetical protein compare
Atu1469 +0.3 1.2 hypothetical protein compare
Atu5010 +0.3 0.8 hypothetical protein compare
Atu3279 +0.3 1.9 methanesulfonate sulfonatase compare
Atu4589 +0.3 1.4 transmembrane transport protein compare
Atu0008 +0.3 1.6 hypothetical protein compare
Atu0225 +0.3 0.4 hypothetical protein compare
Atu0805 +0.3 1.4 hypothetical protein compare
Atu1638 +0.3 1.8 hypothetical protein compare
Atu1967 +0.3 1.6 hypothetical protein compare
Atu6128 +0.3 1.5 Conjugative pilin processing protease compare
Atu0894 +0.3 0.6 ABC transporter, membrane spanning protein compare
Atu2325 +0.3 1.6 hypothetical protein compare
Atu1287 +0.3 1.0 hypothetical protein compare
Atu2607 +0.3 1.7 glucosamine--fructose-6-phosphate aminotransferase compare
Atu0707 +0.3 1.2 transcriptional regulator, LuxR family compare
Atu1125 +0.3 1.1 ABC transporter, membrane spanning protein compare
Atu3510 +0.3 0.9 amidohydrolase compare
Atu0545 +0.3 1.9 flagella associated protein compare
Atu1508 +0.3 1.0 hypothetical protein compare
Atu2148 +0.3 1.3 ABC transporter, membrane spanning protein compare
Atu4792 +0.3 1.0 hypothetical protein compare
Atu5181 +0.3 1.5 short chain dehydrogenase compare
Atu5084 +0.3 1.8 LysR family transcriptional regulator compare
Atu0576 +0.3 1.7 flagellar hook-associated protein compare
Atu3799 +0.3 1.9 GntR family transcriptional regulator compare
Atu1608 +0.3 1.3 hypothetical protein compare
Atu1978 +0.3 1.3 hypothetical protein compare
Atu3334 +0.3 1.7 hypothetical protein compare
Atu0976 +0.3 0.8 cycL protein compare
Atu2130 +0.3 1.2 hypothetical protein compare
Atu3416 +0.3 1.2 ABC transporter substrate binding protein compare
Atu3827 +0.3 1.6 LysR family transcriptional regulator compare
Atu3608 +0.3 1.0 hypothetical protein compare
Atu0573 +0.3 1.8 transcriptional regulator compare
Atu1859 +0.3 1.7 glutaminase A compare
Atu0228 +0.3 1.3 hypothetical protein compare
Atu3632 +0.3 0.7 hypothetical protein compare
Atu1451 +0.3 1.7 GTP-binding protein HFLX compare
Atu4299 +0.3 1.1 hypothetical protein compare
Atu6121 +0.3 1.3 conserved hypothetical protein compare
Atu8094 +0.3 1.1 hypothetical protein compare
Atu2567 +0.3 1.4 thiamin biosynthesis protein ThiG compare
Atu0680 +0.3 1.1 hypothetical protein compare
Atu4245 +0.3 1.4 polyamine ABC transporter permease compare
Atu4236 +0.3 1.7 dehydrogenase compare
Atu4095 +0.3 0.7 hypothetical protein compare
Atu0290 +0.3 1.1 rare lipoprotein A compare
Atu4363 +0.3 1.3 hypothetical protein compare
Atu3432 +0.2 1.7 desulfurizing enzyme compare
Atu3181 +0.2 1.6 hypothetical protein compare
Atu3191 +0.2 1.5 outer membrane protein compare
Atu6189 +0.2 0.4 protein secretion chaperone compare
Atu3455 +0.2 1.8 oligopeptide ABC transporter substrate-binding protein compare
Atu8169 +0.2 1.3 hypothetical protein compare
Atu3451 +0.2 1.4 monooxygenase compare
Atu3009 +0.2 0.5 exopolysaccharide production protein compare
Atu5087 +0.2 1.6 two component sensor kinase compare
Atu6133 +0.2 1.0 conserved hypothetical protein compare
Atu1134 +0.2 2.0 hypothetical protein compare
Atu8038 +0.2 1.7 hypothetical protein compare
Atu4654 +0.2 2.0 sugar ABC transporter substrate-binding protein compare
Atu3092 +0.2 1.5 hypothetical protein compare
Atu2063 +0.2 0.8 hypothetical protein compare
Atu4036 +0.2 1.7 DNA topoisomerase compare
Atu0073 +0.2 1.7 recF-like protein compare
Atu4279 +0.2 1.6 LysR family transcriptional regulator compare
Atu3336 +0.2 0.7 hypothetical protein compare
Atu4128 +0.2 1.8 GMC type oxidoreductase compare
Atu4321 +0.2 1.7 ribose ABC transporter ATPase compare


Specific Phenotypes

For 10 genes in this experiment

For carbon source Methyl beta-D-glucopyranoside in Agrobacterium fabrum C58

For carbon source Methyl beta-D-glucopyranoside across organisms