Experiment set14IT006 for Agrobacterium fabrum C58

Compare to:

Methyl alpha-D-glucopyranoside carbon source

200 most important genes:

  gene name fitness t score description  
Atu1750 -8.3 -5.7 phosphoribosyl c-AMP cyclohydrolase compare
Atu2791 -7.0 -4.9 3-isopropylmalate dehydrogenase compare
Atu2264 -6.8 -6.6 2-isopropylmalate synthase compare
Atu2036 -6.5 -10.0 acetolactate synthase III, large subunit compare
Atu2726 -6.4 -14.4 pyruvate carboxylase compare
Atu2709 -6.3 -12.1 3-isopropylmalate dehydratase, large subunit compare
Atu3338 -6.1 -10.9 trehalose/maltose ABC transporter substrate-binding protein compare
Atu1845 -6.0 -4.2 phosphoribosylformylglycinamidine synthase I compare
Atu0099 -6.0 -10.0 prephenate dehydratase compare
Atu1205 -5.9 -10.6 threonine dehydratase compare
Atu3754 -5.7 -4.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0038 -5.7 -5.6 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3706 -5.7 -5.6 D-3-phosphoglycerate dehydrogenase compare
Atu2040 -5.6 -3.9 phosphoserine phosphatase compare
Atu3342 -5.5 -5.4 trehalose utilization-like protein compare
Atu3707 -5.5 -3.8 phosphoserine aminotransferase compare
Atu1588 -5.4 -8.3 homoserine dehydrogenase compare
Atu0679 -5.3 -5.2 ATP phosphoribosyltransferase compare
Atu1844 -5.2 -3.6 Phosphoribosylformylglycinamidine synthetase compare
Atu1141 -5.2 -5.0 Phosphoribosylglycinamide synthetase compare
Atu0432 -5.1 -8.5 O-succinylhomoserine sulfhydrylase compare
Atu3340 -5.1 -8.6 trehalose/maltose ABC transporter permease compare
Atu0678 -4.9 -4.8 histidyl-tRNA synthetase compare
Atu1075 -4.9 -4.8 amidophosphoribosyltransferase compare
Atu2650 -4.9 -12.5 glycerol-3-phosphate dehydrogenase compare
Atu2718 -4.8 -7.3 homoserine O-succinyltransferase compare
Atu2790 -4.7 -2.7 3-isopropylmalate dehydratase, small subunit compare
Atu0537 -4.6 -4.5 histidinol dehydrogenase compare
Atu3339 -4.6 -10.3 trehalose/maltose ABC transporter permease compare
Atu2289 -4.5 -4.4 anthranilate synthase component I and II compare
Atu1308 -4.5 -3.1 aspartate carbamoyl transferase catalytic subunit compare
Atu1850 -4.4 -3.1 phosphoribosylformylglycinamidine synthetase II compare
Atu1140 -4.4 -3.1 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu1687 -4.3 -3.0 anthranilate phosphoribosyltransferase compare
Atu1359 -4.3 -1.9 dnaK deletion suppressor protein compare
Atu0043 -3.8 -2.6 imidazoleglycerol-phosphate dehydratase compare
Atu0647 -3.8 -3.7 phosphoribosylamine--glycine ligase compare
Atu3885 -3.7 -10.2 inositol monophosphatase compare
Atu2747 -3.6 -10.0 hypothetical protein compare
Atu2274 -3.5 -7.4 cation efflux system protein compare
Atu0041 -3.5 -2.4 glutamine amidotransferase compare
Atu3482 -3.4 -9.8 pantoate--beta-alanine ligase compare
Atu0486 -3.4 -2.3 dihydroorotate dehydrogenase compare
Atu3739 -3.4 -3.5 phosphoglycerate kinase compare
Atu2015 -3.3 -9.4 aminotransferase compare
Atu3341 -3.3 -6.9 trehalose/maltose ABC transporter ATPase compare
Atu0039 -3.1 -2.2 imidazoleglycerol-phosphate synthase cyclase compare
Atu3712 -3.1 -2.8 hypothetical protein compare
Atu0184 -3.1 -2.1 glucokinase compare
Atu0400 -3.0 -2.1 orotate phosphoribosyltransferase compare
Atu3730 -2.7 -2.4 hypothetical protein compare
Atu3483 -2.6 -5.7 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3783 -2.5 -14.0 glutamate synthase subunit beta compare
Atu0040 -2.5 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3755 -2.5 -4.9 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu8054 -2.4 -1.0 hypothetical protein compare
Atu0298 -2.4 -2.3 orotidine 5 compare
Atu1688 -2.4 -1.6 indole-3-glycerol-phosphate synthase compare
Atu3784 -2.4 -17.3 glutamate synthase large subunit compare
Atu0086 -2.4 -1.4 ribosome-binding factor A compare
Atu2684 -2.4 -1.6 hypothetical protein compare
Atu0017 -2.3 -1.6 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu1030 -2.3 -1.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0399 -2.3 -1.6 dihydroorotase compare
Atu3469 -2.2 -2.6 phosphoglyceromutase compare
Atu5106 -2.1 -3.0 DNA binding protein compare
Atu2125 -2.1 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu2155 -2.0 -14.8 methionine synthase compare
Atu3731 -1.9 -6.8 5-formyltetrahydrofolate cyclo-ligase compare
Atu1307 -1.9 -2.5 dihydroorotase compare
Atu1464 -1.9 -6.7 glycine cleavage system T protein, aminomethyltransferase compare
Atu1454 -1.9 -4.6 siroheme synthase compare
Atu4711 -1.9 -6.7 two component sensor kinase compare
Atu2787 -1.8 -1.6 hypothetical protein compare
Atu0031 -1.8 -1.1 PTS system, IIA component compare
Atu0641 -1.8 -3.7 hypothetical protein compare
Atu4514 -1.7 -5.0 RpiR family transcriptional regulator compare
Atu1463 -1.7 -4.5 glycine cleavage system component H compare
Atu1456 -1.6 -6.3 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3343 -1.6 -5.6 trehalose utilization-like protein compare
Atu0595 -1.6 -6.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu1589 -1.6 -5.8 aminotransferase, class I compare
Atu1462 -1.5 -8.4 glycine cleavage system protein P2 compare
Atu1455 -1.5 -2.4 hypothetical protein compare
Atu2694 -1.5 -2.2 hypothetical protein compare
Atu0723 -1.4 -1.9 FAD dependent oxidoreductase compare
Atu0030 -1.4 -1.8 phosphocarrier protein HPr compare
Atu2831 -1.4 -3.5 glucose inhibited division protein A compare
Atu0593 -1.4 -4.4 ABC transporter, membrane spanning protein compare
Atu1182 -1.3 -1.3 hypothetical protein compare
Atu1629 -1.3 -1.5 transcriptional regulator, ArsR family compare
Atu0594 -1.3 -7.3 alpha-glucosidase compare
Atu4617 -1.3 -8.3 dTDP-D-glucose-4,6-dehydratase compare
Atu4613 -1.3 -8.9 glycosyltransferase compare
Atu2548 -1.3 -7.1 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0413 -1.2 -2.3 stress induced protein compare
Atu3353 -1.2 -6.9 mannose-1-phosphate guanylyltransferase compare
Atu4187 -1.2 -1.7 tRNA-Met compare
Atu0346 -1.2 -2.8 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0592 -1.2 -4.9 ABC transporter, membrane spanning protein compare
Atu2067 -1.2 -1.0 hypothetical protein compare
Atu0591 -1.2 -6.3 ABC transporter, substrate binding protein (alpha-glucoside) compare
Atu2017 -1.2 -1.6 hypothetical protein compare
Atu0225 -1.2 -0.9 hypothetical protein compare
Atu4317 -1.2 -2.1 TetR family transcriptional regulator compare
Atu3963 -1.2 -6.5 GntR family transcriptional regulator compare
Atu0062 -1.1 -4.8 transcriptional regulator, ROK family compare
Atu4614 -1.1 -6.9 glycosyltransferase compare
Atu4685 -1.1 -5.7 LacI family transcriptional regulator compare
Atu4618 -1.1 -6.8 dTDP-rhamnose-3,5-epimerase compare
Atu5186 -1.1 -1.7 hypothetical protein compare
Atu1686 -1.1 -5.7 peptidyl-prolyl cis-trans isomerse D compare
Atu3485 -1.1 -6.3 short chain dehydrogenase compare
Atu8161 -1.0 -1.5 hypothetical protein compare
Atu0598 -1.0 -3.6 phosphogluconate dehydratase compare
Atu2207 -1.0 -3.3 two component sensor kinase compare
Atu6098 -1.0 -0.4 transcriptional regulator, HTH family compare
Atu5045 -1.0 -0.9 hypothetical protein compare
Atu0361 -1.0 -2.4 transcriptional regulator compare
Atu1457 -1.0 -1.5 hypothetical protein compare
Atu2183 -1.0 -4.5 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu4615 -1.0 -7.1 glucose-1-phosphate thymidylyltransferase compare
Atu3898 -1.0 -4.1 DeoR family transcriptional regulator compare
Atu0907 -1.0 -1.4 Phosphinothricin acetyltransferase compare
Atu5430 -0.9 -0.8 hypothetical protein compare
Atu0846 -0.9 -3.1 transcriptional regulator, MarR family compare
Atu0354 -0.9 -1.6 ferric uptake regulator compare
Atu5443 -0.9 -2.7 TetR family transcriptional regulator compare
Atu2286 -0.9 -1.6 hypothetical protein compare
Atu1028 -0.9 -1.6 hypothetical protein compare
Atu0026 -0.9 -0.8 hypothetical protein compare
Atu4029 -0.9 -3.4 gluconolactonase compare
Atu3532 -0.9 -3.9 GntR family transcriptional regulator compare
Atu3183 -0.9 -0.9 hypothetical protein compare
Atu4616 -0.9 -1.3 dTDP-4-dehydrorhamnose reductase compare
Atu0976 -0.9 -1.5 cycL protein compare
Atu3311 -0.9 -6.1 phosphomannose isomerase compare
Atu1546 -0.9 -3.9 transcriptional regulator, MerR family compare
Atu6189 -0.9 -0.6 protein secretion chaperone compare
Atu4418 -0.9 -3.0 glutaryl-CoA dehydrogenase compare
Atu0768 -0.9 -5.6 cytochrome-c oxidase chain I compare
Atu8063 -0.8 -1.6 hypothetical protein compare
Atu2217 -0.8 -3.2 hypothetical protein compare
Atu1254 -0.8 -1.1 transcriptional regulator, ArsR family compare
Atu0606 -0.8 -0.9 hypothetical protein compare
Atu1518 -0.8 -1.8 transcriptional regulator, Fur family compare
Atu4702 -0.8 -2.9 GntR family transcriptional regulator compare
Atu0141 -0.8 -1.0 cytochrome O ubiquinol oxidase subunit I compare
Atu4446 -0.8 -5.5 hypothetical protein compare
Atu3265 -0.8 -2.4 hypothetical protein compare
Atu3667 -0.8 -2.9 aspartate alpha-decarboxylase compare
Atu6179 -0.8 -2.5 virA/G regulated protein compare
Atu3727 -0.8 -2.5 hypothetical protein compare
Atu4873 -0.8 -4.5 TetR family transcriptional regulator compare
Atu4896 -0.8 -1.9 acetyltransferase compare
Atu2821 -0.7 -2.8 transcriptional regulator, GntR family compare
Atu2113 -0.7 -1.4 N-acetylmuramoyl-L-alanine amidase compare
Atu1667 -0.7 -1.3 hypothetical protein compare
Atu1480 -0.7 -2.1 hypothetical protein compare
Atu4576 -0.7 -3.5 ROK family transcriptional regulator compare
Atu4773 -0.7 -0.7 two component response regulator compare
Atu4375 -0.7 -4.9 hypothetical protein compare
Atu4166 -0.7 -1.8 UDP-glucose 4-epimerase compare
Atu4890 -0.7 -1.5 IS426 transposase compare
Atu0851 -0.7 -2.1 hypothetical protein compare
Atu0771 -0.7 -3.5 cytochrome c oxidase subunit III compare
Atu2238 -0.7 -2.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0029 -0.7 -2.6 S-adenosylhomocysteine hydrolase compare
Atu2239 -0.7 -1.3 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu6173 -0.7 -1.8 component of type IV secretion system compare
Atu3763 -0.7 -1.0 hypothetical protein compare
Atu4176 -0.7 -2.5 hypothetical protein compare
Atu1021 -0.7 -1.1 outer membrane protein compare
Atu3121 -0.7 -1.0 cold shock protein compare
Atu2768 -0.7 -2.7 hypothetical protein compare
Atu2379 -0.7 -4.2 phosphomannomutase compare
Atu0767 -0.7 -2.7 cytochrome c oxidase subunit II compare
Atu0886 -0.7 -0.8 hypothetical protein compare
Atu0328 -0.7 -3.9 heat-inducible transcription repressor compare
Atu5142 -0.7 -0.8 hypothetical protein compare
Atu2777 -0.7 -3.2 hypothetical protein compare
Atu1495 -0.6 -1.3 hypothetical protein compare
Atu1286 -0.6 -1.5 hypothetical protein compare
Atu8138 -0.6 -0.9 hypothetical protein compare
Atu1818 -0.6 -0.8 hypothetical protein compare
Atu0861 -0.6 -1.4 hypothetical protein compare
Atu1327 -0.6 -1.7 NADH-ubiquinone oxidoreductase compare
Atu0953 -0.6 -0.6 hypothetical protein compare
Atu6045 -0.6 -0.8 replication protein C compare
Atu4641 -0.6 -2.1 LysR family transcriptional regulator compare
Atu2237 -0.6 -2.0 cytochrome c1 compare
Atu3144 -0.6 -2.2 GntR family transcriptional regulator compare
Atu2737 -0.6 -2.3 oxidoredutase compare
Atu2200 -0.6 -1.6 cold shock protein compare
Atu4609 -0.6 -4.8 glycosyltransferase compare
Atu0047 -0.6 -4.3 malate synthase G compare
Atu2792 -0.6 -3.1 hypothetical protein compare
Atu1445 -0.6 -2.3 two component sensor kinase compare
Atu5540 -0.6 -0.5 hypothetical protein compare
Atu4451 -0.6 -3.5 mannitol 2-dehydrogenase compare


Specific Phenotypes

For 9 genes in this experiment

For carbon source Methyl alpha-D-glucopyranoside in Agrobacterium fabrum C58

For carbon source Methyl alpha-D-glucopyranoside across organisms