Experiment set14IT006 for Agrobacterium fabrum C58

Compare to:

Methyl alpha-D-glucopyranoside carbon source

200 most detrimental genes:

  gene name fitness t score description  
Atu3337 +11.5 101.1 LacI family transcriptional regulator compare
Atu0590 +2.1 14.0 transcriptional regulator repressor compare
Atu5164 +1.8 2.1 type IV secretion protein AvhB3 compare
Atu3613 +1.3 1.3 hypothetical protein compare
Atu5121 +1.2 7.6 two component response regulator compare
Atu0784 +1.1 3.8 hypothetical protein compare
Atu2800 +1.0 1.9 precorrin-3B C17-methyltransferase compare
Atu0577 +1.0 4.7 FLAF protein compare
Atu1566 +1.0 1.9 hypothetical protein compare
Atu2193 +0.9 1.7 hypothetical protein compare
Atu6137 +0.9 1.1 hypothetical protein compare
Atu3740 +0.9 4.6 fructose bisphosphate aldolase compare
Atu8035 +0.9 2.4 hypothetical protein compare
Atu5114 +0.8 2.2 hypothetical protein compare
Atu8082 +0.8 2.0 hypothetical protein compare
Atu2325 +0.8 3.1 hypothetical protein compare
Atu0569 +0.8 4.2 flagellar motor protein, PAL/OmpA family compare
Atu5501 +0.8 1.6 hypothetical protein compare
Atu0523 +0.8 6.5 flagellar M-ring protein compare
Atu3120 +0.8 1.5 hypothetical protein compare
Atu1325 +0.8 1.7 acetyltransferase compare
Atu0369 +0.8 2.5 hypothetical protein compare
Atu5115 +0.8 0.9 hypothetical protein compare
Atu0645 +0.7 1.1 hypothetical protein compare
Atu1891 +0.7 2.2 cobalamin biosynthesis protein compare
Atu0555 +0.7 4.5 flagellar basal-body rod protein FlgB compare
Atu2344 +0.7 2.2 lactoylglutathione lyase compare
Atu0912 +0.7 0.9 Na+/H+ antiporter compare
Atu0568 +0.7 4.3 hypothetical protein compare
Atu0525 +0.7 4.0 transcriptional regulator, LuxR family compare
Atu4724 +0.7 1.5 hypothetical protein compare
Atu1573 +0.7 1.7 hypothetical protein compare
Atu0560 +0.7 4.7 flagellar motor protein compare
Atu0319 +0.7 1.1 ubiquinone biosynthesis protein compare
Atu1980 +0.7 1.5 hypothetical protein compare
Atu0583 +0.7 3.5 hypothetical protein compare
Atu5448 +0.7 2.8 hypothetical protein compare
Atu1859 +0.7 2.7 glutaminase A compare
Atu5429 +0.7 1.5 transcriptional regulator compare
Atu1679 +0.7 1.8 peptidyl prolyl cis-trans isomerase compare
Atu2433 +0.6 1.3 hypothetical protein compare
Atu0549 +0.6 3.6 hypothetical protein compare
Atu0578 +0.6 4.0 FlbT post-transcriptional regulator of flagellin compare
Atu0546 +0.6 4.1 flagellar biosynthetic protein compare
Atu2140 +0.6 1.3 hypothetical protein compare
Atu1301 +0.6 2.4 hypothetical protein compare
Atu1470 +0.6 1.0 Camphor resistance protein compare
Atu0561 +0.6 3.8 flagellar motor switch protein compare
Atu1302 +0.6 2.2 hypothetical protein compare
Atu1223 +0.6 1.4 hypothetical protein compare
Atu1225 +0.6 1.0 hypothetical protein compare
Atu2249 +0.6 1.1 hypothetical protein compare
Atu1888 +0.6 4.5 two component sensor kinase compare
Atu0581 +0.6 5.2 flagellar biosynthesis protein compare
Atu4133 +0.6 2.0 hypothetical protein compare
Atu4093 +0.6 2.1 hypothetical protein compare
Atu0558 +0.6 3.6 flagellar basal body rod protein compare
Atu1287 +0.6 1.9 hypothetical protein compare
Atu8023 +0.6 1.7 hypothetical protein compare
Atu0547 +0.6 3.8 flagellar protein compare
Atu0557 +0.6 4.3 flagellum-specific ATP synthase compare
Atu0580 +0.6 2.1 flagellar biosynthetic protein compare
Atu8158 +0.6 1.4 hypothetical protein compare
Atu4035 +0.6 3.6 two component response regulator compare
Atu1836 +0.6 1.0 hypothetical protein compare
Atu5455 +0.6 2.1 hypothetical protein compare
Atu3008 +0.6 1.0 hypothetical protein compare
Atu5010 +0.6 1.3 hypothetical protein compare
Atu4779 +0.6 1.7 hypothetical protein compare
Atu0559 +0.6 4.3 hypothetical protein compare
Atu1314 +0.6 2.7 transcriptional regulator, TetR family compare
Atu0574 +0.6 4.7 flagellar hook protein compare
Atu0548 +0.6 3.7 flagellar L-ring protein precursor compare
Atu0582 +0.6 4.1 flagellar biosynthetic protein FLIR compare
Atu0905 +0.6 1.6 dnaK suppressor protein compare
Atu0564 +0.5 3.9 flagellar biosynthetic protein compare
Atu2603 +0.5 2.5 ABC transporter, membrane spanning protein (maltose) compare
Atu0575 +0.5 4.1 flagellar hook associated protein compare
Atu5427 +0.5 1.1 hypothetical protein compare
Atu2052 +0.5 2.3 hypothetical protein compare
Atu0528 +0.5 1.6 large conductance mechanosensitive channel protein compare
Atu3578 +0.5 1.8 glycerol-3-phosphate dehydrogenase compare
Atu8017 +0.5 1.5 hypothetical protein compare
Atu2585 +0.5 2.5 hypothetical protein compare
Atu5149 +0.5 1.8 acetyltransferase compare
Atu0149 +0.5 1.4 enoyl-(acyl-carrier-protein) reductase compare
Atu3336 +0.5 2.1 hypothetical protein compare
Atu3148 +0.5 1.9 sugar ABC transporter ATPase compare
Atu2069 +0.5 1.9 hypothetical protein compare
Atu0843 +0.5 3.9 P type cation (metal) transporter, ATPase component compare
Atu5057 +0.5 0.9 hypothetical protein compare
Atu0570 +0.5 3.9 Chemotaxis protein compare
Atu3521 +0.5 1.6 permease compare
Atu1110 +0.5 1.3 cytosol aminopeptidase compare
Atu0552 +0.5 3.7 flagellar basal-body rod protein compare
Atu1058 +0.5 1.7 hypothetical protein compare
Atu3463 +0.5 1.6 non-heme chloroperoxidase compare
Atu2793 +0.5 2.2 cobyrinic acid a,c-diamide synthase compare
Atu1380 +0.5 2.6 zinc metallopeptidase compare
Atu0993 +0.5 1.9 transcriptional regulator, TetR family compare
Atu0550 +0.5 3.6 flagellar P-ring protein precursor compare
Atu4028 +0.5 2.1 recombination regulator RecX compare
Atu4792 +0.5 0.9 hypothetical protein compare
Atu5161 +0.5 2.1 hypothetical protein compare
Atu2633 +0.5 1.2 RhtB family transporter compare
Atu2660 +0.5 1.1 hypothetical protein compare
Atu4068 +0.5 1.1 sarcosine oxidase delta subunit compare
Atu4245 +0.5 1.8 polyamine ABC transporter permease compare
Atu6119 +0.5 2.0 conserved hypothetical protein compare
Atu1919 +0.5 2.5 hypothetical protein compare
Atu6112 +0.5 1.4 conserved hypothetical protein compare
Atu5160 +0.5 1.3 transcriptional regulator protein compare
Atu4452 +0.5 1.8 hypothetical protein compare
Atu0524 +0.5 2.6 transcriptional regulator, LuxR family compare
Atu5097 +0.4 1.9 ATP-dependent DNA ligase compare
Atu0544 +0.4 0.7 hypothetical protein compare
Atu3872 +0.4 1.8 hypothetical protein compare
Atu3392 +0.4 2.0 methyltransferase compare
Atu0571 +0.4 3.5 chemotaxis MotD protein compare
Atu1682 +0.4 1.5 hypothetical protein compare
Atu2041 +0.4 1.3 acetyltransferase compare
Atu3429 +0.4 0.9 hypothetical protein compare
Atu0206 +0.4 1.5 hypothetical protein compare
Atu1550 +0.4 2.1 polypeptide deformylase compare
Atu0576 +0.4 2.6 flagellar hook-associated protein compare
Atu3324 +0.4 1.5 hypothetical protein compare
Atu3775 +0.4 1.2 hypothetical protein compare
Atu0744 +0.4 1.7 hypothetical protein compare
Atu1219 +0.4 0.5 hypothetical protein compare
Atu0495 +0.4 1.9 hypothetical protein compare
Atu2394 +0.4 2.3 Regulator of Biofilm formation, Fnr Family compare
Atu8159 +0.4 1.0 hypothetical protein compare
Atu0386 +0.4 1.0 hypothetical protein compare
Atu0554 +0.4 2.9 flagellar basal-body rod protein compare
Atu0553 +0.4 2.3 flagellar hook-basal body complex protein compare
Atu0996 +0.4 1.8 zinc-binding dehydrogenase compare
Atu5084 +0.4 2.2 LysR family transcriptional regulator compare
Atu5519 +0.4 1.8 hypothetical protein compare
Atu4897 +0.4 0.8 hypothetical protein compare
Atu4033 +0.4 3.3 sugar ABC transporter substrate-binding protein compare
Atu0573 +0.4 2.8 transcriptional regulator compare
Atu4589 +0.4 2.1 transmembrane transport protein compare
Atu0584 +0.4 2.1 hypothetical protein compare
Atu0649 +0.4 1.2 cyclopropane-fatty-acyl-phospholipid synthase compare
Atu0379 +0.4 1.5 hypothetical protein compare
Atu6030 +0.4 1.9 ORF13 hypothetical protein compare
Atu4287 +0.4 1.2 NonF-like protein compare
Atu4364 +0.4 3.1 LacI family transcriptional regulator compare
Atu0446 +0.4 2.4 hypothetical protein compare
Atu0983 +0.4 1.3 hypothetical protein compare
Atu2130 +0.4 1.9 hypothetical protein compare
Atu5511 +0.4 1.4 hypothetical protein compare
Atu2526 +0.4 1.1 hypothetical protein compare
Atu6054 +0.4 1.3 conserved hypothetical protein compare
Atu1535 +0.4 1.0 cytochrome c oxidase, FixQ chain compare
Atu5128 +0.4 2.8 ABC transporter membrane spanning protein (mannopine) compare
Atu2662 +0.4 0.7 acetyltransferase compare
Atu1739 +0.4 1.7 permease compare
Atu8132 +0.4 2.5 hypothetical protein compare
Atu2464 +0.4 1.3 formyltetrahydrofolate deformylase compare
Atu6180 +0.4 2.3 virA/G regulated protein compare
Atu4442 +0.4 2.3 hypothetical protein compare
Atu0276 +0.4 1.4 hypothetical protein compare
Atu5107 +0.4 1.3 hypothetical protein compare
Atu0572 +0.4 0.9 hypothetical protein compare
Atu4223 +0.4 1.0 sarcosine oxidase delta subunit compare
Atu0892 +0.4 2.1 hypothetical protein compare
Atu0228 +0.4 1.0 hypothetical protein compare
Atu5087 +0.4 2.4 two component sensor kinase compare
Atu6160 +0.4 1.3 conserved hypothetical protein compare
Atu3647 +0.4 1.5 hypothetical protein compare
Atu1466 +0.4 0.9 hypothetical protein compare
Atu5481 +0.4 1.7 ABC transporter membrane spanning protein compare
Atu6135 +0.4 2.3 Sucrose phosphorylase-like protein compare
Atu8052 +0.4 0.6 hypothetical protein compare
Atu0271 +0.4 1.8 transcriptional regulator, GntR family compare
Atu5081 +0.4 1.6 ABC transporter membrane spanning protein (sugar) compare
Atu8018 +0.4 0.5 hypothetical protein compare
Atu0612 +0.4 1.3 ABC transporter, membrane spanning protein compare
Atu5163 +0.4 0.9 type IV secretion protein AvhB2 compare
Atu2439 +0.4 0.6 hypothetical protein compare
Atu4697 +0.4 2.3 oligopeptide ABC transporter permease compare
Atu5140 +0.4 2.0 hypothetical protein compare
Atu4149 +0.4 2.7 UDP-glucose 6-dehydrogenase compare
Atu3415 +0.4 1.9 ABC transporter substrate binding protein compare
Atu0888 +0.4 1.9 transcriptional regulator, MerR family compare
Atu1423 +0.4 1.8 hypothetical protein compare
Atu4718 +0.4 1.7 GntR family transcriptional regulator compare
Atu1001 +0.4 2.1 hypothetical protein compare
Atu5450 +0.4 1.5 hypothetical protein compare
Atu1547 +0.4 2.4 magnesium transport protein compare
Atu6186 +0.4 1.1 virA/G regulated protein compare
Atu1997 +0.4 2.0 sulfite reductase compare
Atu8118 +0.4 1.7 putative universal stress protein compare
Atu1491 +0.4 1.6 sodium bile acid symporter family protein compare
Atu5409 +0.4 1.9 ABC transporter substrate binding protein (amino acid) compare
Atu5118 +0.4 2.1 hypothetical protein compare
Atu0394 +0.4 2.2 ABC transporter, substrate binding protein (sugar) compare
Atu1884 +0.4 2.2 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu0563 +0.4 2.3 flagellar motor switch protein FliG compare


Specific Phenotypes

For 9 genes in this experiment

For carbon source Methyl alpha-D-glucopyranoside in Agrobacterium fabrum C58

For carbon source Methyl alpha-D-glucopyranoside across organisms