Experiment set14IT005 for Agrobacterium fabrum C58

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
Atu2726 -6.5 -25.1 pyruvate carboxylase compare
Atu1750 -6.5 -5.0 phosphoribosyl c-AMP cyclohydrolase compare
Atu0537 -6.4 -4.4 histidinol dehydrogenase compare
Atu2264 -6.4 -14.9 2-isopropylmalate synthase compare
Atu2040 -6.3 -6.1 phosphoserine phosphatase compare
Atu1844 -6.3 -4.3 Phosphoribosylformylglycinamidine synthetase compare
Atu2036 -6.3 -17.2 acetolactate synthase III, large subunit compare
Atu2709 -6.0 -21.9 3-isopropylmalate dehydratase, large subunit compare
Atu2718 -5.9 -11.4 homoserine O-succinyltransferase compare
Atu0099 -5.9 -12.7 prephenate dehydratase compare
Atu1308 -5.9 -4.1 aspartate carbamoyl transferase catalytic subunit compare
Atu2274 -5.9 -10.2 cation efflux system protein compare
Atu0678 -5.8 -6.9 histidyl-tRNA synthetase compare
Atu2791 -5.8 -11.1 3-isopropylmalate dehydrogenase compare
Atu1845 -5.7 -3.7 phosphoribosylformylglycinamidine synthase I compare
Atu3885 -5.7 -11.0 inositol monophosphatase compare
Atu3706 -5.6 -10.8 D-3-phosphoglycerate dehydrogenase compare
Atu0679 -5.6 -9.0 ATP phosphoribosyltransferase compare
Atu1850 -5.5 -5.3 phosphoribosylformylglycinamidine synthetase II compare
Atu3707 -5.5 -5.4 phosphoserine aminotransferase compare
Atu0432 -5.5 -11.4 O-succinylhomoserine sulfhydrylase compare
Atu1075 -5.4 -7.4 amidophosphoribosyltransferase compare
Atu2650 -5.4 -14.2 glycerol-3-phosphate dehydrogenase compare
Atu2289 -5.3 -8.1 anthranilate synthase component I and II compare
Atu1307 -5.3 -3.6 dihydroorotase compare
Atu1687 -5.3 -5.1 anthranilate phosphoribosyltransferase compare
Atu0038 -4.9 -8.2 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0486 -4.9 -3.4 dihydroorotate dehydrogenase compare
Atu2790 -4.9 -3.8 3-isopropylmalate dehydratase, small subunit compare
Atu1205 -4.8 -13.7 threonine dehydratase compare
Atu1588 -4.8 -9.4 homoserine dehydrogenase compare
Atu0647 -4.8 -6.5 phosphoribosylamine--glycine ligase compare
Atu2747 -4.7 -16.4 hypothetical protein compare
Atu0039 -4.7 -3.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu0043 -4.6 -4.5 imidazoleglycerol-phosphate dehydratase compare
Atu3469 -4.4 -3.0 phosphoglyceromutase compare
Atu0184 -4.1 -4.0 glucokinase compare
Atu0400 -4.0 -3.8 orotate phosphoribosyltransferase compare
Atu0017 -3.9 -2.7 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu0041 -3.8 -3.2 glutamine amidotransferase compare
Atu0399 -3.8 -2.7 dihydroorotase compare
Atu1140 -3.7 -3.8 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3754 -3.7 -5.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu1688 -3.6 -2.5 indole-3-glycerol-phosphate synthase compare
Atu0040 -3.6 -2.0 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1686 -3.5 -12.8 peptidyl-prolyl cis-trans isomerse D compare
Atu0298 -3.5 -4.8 orotidine 5 compare
Atu3783 -3.5 -17.1 glutamate synthase subunit beta compare
Atu3739 -3.4 -3.8 phosphoglycerate kinase compare
Atu2015 -3.4 -11.2 aminotransferase compare
Atu1456 -3.4 -13.0 sulfite reductase (NADPH) hemoprotein beta-component compare
Atu3755 -3.4 -5.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1141 -3.3 -6.3 Phosphoribosylglycinamide synthetase compare
Atu2548 -3.2 -16.6 phosphoribosylaminoimidazole-succinocarboxamide synthase compare
Atu0641 -3.1 -5.1 hypothetical protein compare
Atu1454 -2.9 -6.0 siroheme synthase compare
Atu0185 -2.9 -3.7 methylglyoxal synthase compare
Atu3483 -2.9 -9.2 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
Atu3482 -2.9 -8.9 pantoate--beta-alanine ligase compare
Atu3784 -2.8 -21.0 glutamate synthase large subunit compare
Atu1589 -2.6 -7.5 aminotransferase, class I compare
Atu0598 -2.6 -7.7 phosphogluconate dehydratase compare
Atu0723 -2.4 -2.9 FAD dependent oxidoreductase compare
Atu1620 -2.3 -10.2 triosephosphate isomerase compare
Atu1359 -2.3 -1.8 dnaK deletion suppressor protein compare
Atu4711 -2.3 -7.2 two component sensor kinase compare
Atu1455 -2.2 -4.1 hypothetical protein compare
Atu4075 -2.2 -6.8 glycogen synthase compare
Atu2155 -2.2 -15.5 methionine synthase compare
Atu2349 -2.1 -3.3 hypothetical protein compare
Atu2346 -1.9 -12.0 ABC transporter, membrane spanning protein (sugar) compare
Atu1464 -1.9 -7.8 glycine cleavage system T protein, aminomethyltransferase compare
Atu1446 -1.9 -1.3 two component response regulator compare
Atu1462 -1.9 -10.1 glycine cleavage system protein P2 compare
Atu0422 -1.8 -2.2 ABC transporter, membrane spanning protein compare
Atu0029 -1.8 -4.8 S-adenosylhomocysteine hydrolase compare
Atu2348 -1.8 -9.1 sugar binding protein compare
Atu2347 -1.8 -8.3 ABC transporter, nucleotide binding/ATPase protein (sugar) compare
Atu1463 -1.7 -5.5 glycine cleavage system component H compare
Atu3731 -1.7 -6.2 5-formyltetrahydrofolate cyclo-ligase compare
Atu2113 -1.7 -2.6 N-acetylmuramoyl-L-alanine amidase compare
Atu0434 -1.7 -2.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu3763 -1.6 -2.1 hypothetical protein compare
Atu2183 -1.5 -7.6 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu0421 -1.5 -1.5 ABC transporter, membrane spanning protein compare
Atu0346 -1.5 -2.2 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1457 -1.5 -2.3 hypothetical protein compare
Atu3576 -1.5 -10.1 xylose ABC transporter substrate-binding protein conserved
Atu1219 -1.5 -1.4 hypothetical protein compare
Atu2067 -1.3 -1.2 hypothetical protein compare
Atu4616 -1.3 -2.3 dTDP-4-dehydrorhamnose reductase compare
Atu3353 -1.3 -9.2 mannose-1-phosphate guanylyltransferase compare
Atu2209 -1.3 -4.9 pyrroline-5-carboxylate reductase compare
Atu4614 -1.3 -8.6 glycosyltransferase compare
Atu0361 -1.3 -3.1 transcriptional regulator compare
Atu3574 -1.3 -6.8 xylose ABC transporter ATPase compare
Atu4618 -1.3 -8.1 dTDP-rhamnose-3,5-epimerase compare
Atu5513 -1.2 -2.1 cold shock protein compare
Atu8115 -1.2 -4.1 Hypothetical Protein compare
Atu0030 -1.2 -2.1 phosphocarrier protein HPr compare
Atu1570 -1.2 -1.3 hypothetical protein compare
Atu0876 -1.2 -1.4 superoxide dismutase compare
Atu3486 -1.2 -3.3 DeoR family transcriptional regulator compare
Atu2205 -1.2 -3.9 transcriptional regulator, MarR family compare
Atu3575 -1.2 -5.1 xylose ABC transporter permease conserved
Atu4317 -1.2 -2.1 TetR family transcriptional regulator compare
Atu0332 -1.1 -5.3 RNA polymerase sigma-54 factor compare
Atu2728 -1.1 -4.0 beta (1-->2) glucan export ATP-binding protein compare
Atu4615 -1.1 -6.8 glucose-1-phosphate thymidylyltransferase compare
Atu4617 -1.1 -7.1 dTDP-D-glucose-4,6-dehydratase compare
Atu1604 -1.1 -7.6 poly-beta-hydroxybutyrate synthase compare
Atu0354 -1.1 -2.3 ferric uptake regulator compare
Atu4613 -1.1 -8.5 glycosyltransferase compare
Atu1030 -1.0 -1.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3311 -1.0 -7.5 phosphomannose isomerase compare
Atu4882 -1.0 -2.2 hypothetical protein compare
Atu0101 -1.0 -1.8 cytochrome c compare
Atu1685 -1.0 -1.0 hypothetical protein compare
Atu3496 -1.0 -4.0 hypothetical protein compare
Atu5125 -0.9 -3.2 GntR family transcriptional regulator compare
Atu3001 -0.9 -2.8 hypothetical protein compare
Atu0533 -0.9 -3.3 putative inhibitor of septum formation compare
Atu4187 -0.9 -1.6 tRNA-Met compare
Atu2439 -0.9 -1.3 hypothetical protein compare
Atu4166 -0.9 -2.2 UDP-glucose 4-epimerase compare
Atu1683 -0.9 -1.9 hypothetical protein compare
Atu3727 -0.9 -2.6 hypothetical protein compare
Atu8138 -0.9 -1.5 hypothetical protein compare
Atu0894 -0.9 -2.5 ABC transporter, membrane spanning protein compare
Atu4514 -0.8 -3.4 RpiR family transcriptional regulator compare
Atu1327 -0.8 -2.0 NADH-ubiquinone oxidoreductase compare
Atu1286 -0.8 -2.6 hypothetical protein compare
Atu6165 -0.8 -0.6 hypothetical protein compare
Atu2832 -0.8 -2.4 tRNA modification GTPase compare
Atu2207 -0.8 -3.0 two component sensor kinase compare
Atu3712 -0.8 -1.8 hypothetical protein compare
Atu2442 -0.8 -2.6 hypothetical protein compare
Atu2123 -0.8 -3.7 methylenetetrahydrofolate reductase compare
Atu6045 -0.8 -1.2 replication protein C compare
Atu5475 -0.8 -1.8 hypothetical protein compare
Atu2239 -0.8 -2.7 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu0846 -0.8 -2.8 transcriptional regulator, MarR family compare
Atu0883 -0.8 -1.8 hypothetical protein compare
Atu8052 -0.8 -1.2 hypothetical protein compare
Atu1518 -0.7 -2.1 transcriptional regulator, Fur family compare
Atu1339 -0.7 -1.8 ribonuclease E compare
Atu2831 -0.7 -2.5 glucose inhibited division protein A compare
Atu2237 -0.7 -2.8 cytochrome c1 compare
Atu0977 -0.7 -2.9 serine protease DO-like protease compare
Atu0419 -0.7 -1.3 two component sensor kinase compare
Atu6036 -0.7 -0.8 entry-exclusion protein compare
Atu1714 -0.7 -1.2 exonuclease III compare
Atu2057 -0.7 -1.8 DNA helicase II compare
Atu1028 -0.7 -1.5 hypothetical protein compare
Atu3485 -0.7 -4.4 short chain dehydrogenase compare
Atu0188 -0.7 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu2376 -0.7 -0.5 hypothetical protein compare
Atu1573 -0.7 -1.1 hypothetical protein compare
Atu1291 -0.7 -1.4 hypothetical protein compare
Atu1904 -0.7 -2.6 transcriptional regulator compare
Atu1364 -0.6 -2.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3121 -0.6 -0.7 cold shock protein compare
Atu2238 -0.6 -3.4 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu0585 -0.6 -1.7 hypothetical protein compare
Atu1445 -0.6 -2.7 two component sensor kinase compare
Atu2131 -0.6 -3.2 hypothetical protein compare
Atu2193 -0.6 -0.8 hypothetical protein compare
Atu0845 -0.6 -2.2 hypothetical protein compare
Atu2080 -0.6 -2.4 acetyltransferase compare
Atu2432 -0.6 -1.4 hypothetical protein compare
Atu0086 -0.6 -0.8 ribosome-binding factor A compare
Atu4773 -0.6 -0.6 two component response regulator compare
Atu6195 -0.6 -2.0 conserved hypothetical protein compare
Atu5429 -0.6 -1.7 transcriptional regulator compare
Atu3315 -0.6 -2.6 UDP-glucose 4-epimerase compare
Atu0606 -0.6 -1.2 hypothetical protein compare
Atu3517 -0.6 -2.5 acetyltransferase compare
Atu2286 -0.6 -1.1 hypothetical protein compare
Atu4743 -0.6 -3.3 LacI family transcriptional regulator compare
Atu1074 -0.6 -4.1 NAD/NADP dependent oxidoreductase compare
Atu2554 -0.6 -1.2 lysyl-tRNA synthetase compare
Atu4391 -0.6 -2.2 nitric oxide reductase NorE protein compare
Atu3886 -0.6 -3.5 lysophospholipase compare
Atu5107 -0.6 -2.0 hypothetical protein compare
Atu0755 -0.6 -1.5 hypothetical protein compare
Atu2797 -0.6 -1.8 cobalamin biosynthesis protein compare
Atu2125 -0.6 -0.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu0535 -0.6 -2.1 hypothetical protein compare
Atu5010 -0.6 -1.5 hypothetical protein compare
Atu3572 -0.5 -2.7 transcriptional regulator compare
Atu4685 -0.5 -3.0 LacI family transcriptional regulator compare
Atu2187 -0.5 -1.3 transcriptional regulator, ArsR family compare
Atu3429 -0.5 -0.9 hypothetical protein compare
Atu4541 -0.5 -3.0 carboxymuconolactone decarboxylase compare
Atu1581 -0.5 -1.3 hypothetical protein compare
Atu3265 -0.5 -2.4 hypothetical protein compare
Atu3963 -0.5 -2.7 GntR family transcriptional regulator compare
Atu0477 -0.5 -0.9 hypothetical protein compare
Atu8025 -0.5 -0.7 hypothetical protein compare
Atu0205 -0.5 -3.6 methylmalonate-semialdehyde dehydrogenase compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source D-Glucose in Agrobacterium fabrum C58

For carbon source D-Glucose across organisms