Experiment set13IT060 for Pseudomonas simiae WCS417

Compare to:

Wcs_1

200 most important genes:

  gene name fitness t score description  
PS417_24705 -4.7 -2.8 D-alanyl-D-alanine carboxypeptidase compare
PS417_17945 -4.6 -1.2 hypothetical protein compare
PS417_22570 -4.2 -1.1 H-NS histone compare
PS417_17755 -3.4 -2.7 hypothetical protein compare
PS417_09470 -3.4 -1.3 hypothetical protein compare
PS417_21565 -3.3 -4.6 flagellar basal body rod protein FlgC compare
PS417_08620 -3.2 -1.2 hypothetical protein compare
PS417_12855 -3.0 -5.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
PS417_11930 -3.0 -5.3 hypothetical protein compare
PS417_19885 -3.0 -3.3 flagellar basal body rod protein FlgG compare
PS417_04170 -3.0 -5.8 stringent starvation protein A compare
PS417_16490 -3.0 -1.5 cell division protein FtsK compare
PS417_06685 -2.9 -1.1 beta-ketoadipyl CoA thiolase compare
PS417_19600 -2.8 -1.0 exonuclease compare
PS417_22210 -2.8 -2.3 AraC family transcriptional regulator compare
PS417_21480 -2.8 -1.7 23S rRNA pseudouridylate synthase compare
PS417_23775 -2.7 -1.9 exodeoxyribonuclease V subunit beta compare
PS417_19825 -2.7 -11.8 ATPase AAA compare
PS417_27195 -2.6 -1.0 N-acetylglutamate synthase compare
PS417_28075 -2.6 -5.7 phosphate ABC transporter permease compare
PS417_17405 -2.6 -2.5 AraC family transcriptional regulator compare
PS417_27875 -2.4 -7.1 histidine kinase compare
PS417_19560 -2.4 -5.8 amino acid ABC transporter substrate-binding protein compare
PS417_21510 -2.4 -1.8 histidine kinase compare
PS417_28070 -2.4 -7.0 phosphate ABC transporter ATP-binding protein compare
PS417_22620 -2.4 -3.3 pyruvate kinase compare
PS417_19880 -2.3 -7.1 flagellar basal body L-ring protein compare
PS417_28230 -2.3 -2.4 transcriptional regulator compare
PS417_23830 -2.3 -8.8 hypothetical protein compare
PS417_16400 -2.2 -2.1 NAD(P)H-quinone oxidoreductase compare
PS417_19955 -2.2 -1.6 hypothetical protein compare
PS417_05815 -2.2 -3.3 recombinase RecA compare
PS417_23370 -2.2 -3.7 protoheme IX farnesyltransferase compare
PS417_04650 -2.2 -0.8 D-alanine--D-alanine ligase compare
PS417_02950 -2.1 -2.9 tRNA-dihydrouridine synthase B compare
PS417_16195 -2.1 -0.9 AraC family transcriptional regulator compare
PS417_06710 -2.1 -1.3 beta-ketoadipyl CoA thiolase compare
PS417_19695 -2.0 -7.5 flagellar biosynthesis sigma factor compare
PS417_00195 -2.0 -2.3 hypothetical protein compare
PS417_06680 -2.0 -4.8 nuclease PIN compare
PS417_28085 -2.0 -7.4 phosphate-binding protein compare
PS417_21630 -2.0 -2.5 magnesium transporter compare
PS417_17215 -2.0 -2.4 peptidylprolyl isomerase compare
PS417_21555 -2.0 -7.3 flagellar hook protein FlgE compare
PS417_26685 -1.9 -2.0 hypothetical protein compare
PS417_20160 -1.9 -5.4 cysteine synthase compare
PS417_19765 -1.9 -6.8 flagellar hook-length control protein compare
PS417_08545 -1.9 -1.8 aromatic ring-opening dioxygenase LigB compare
PS417_03200 -1.9 -2.6 ArsR family transcriptional regulator compare
PS417_19725 -1.9 -3.7 flagellar biosynthesis protein FlhB compare
PS417_06095 -1.9 -1.5 energy transducer TonB compare
PS417_08540 -1.9 -1.9 RNA helicase compare
PS417_22445 -1.9 -2.2 ATP-dependent DNA helicase RuvB compare
PS417_28450 -1.8 -2.4 XRE family transcriptional regulator compare
PS417_01115 -1.8 -1.3 serine acetyltransferase compare
PS417_24840 -1.8 -1.7 hypothetical protein compare
PS417_27940 -1.7 -1.5 type VI secretion protein compare
PS417_22575 -1.7 -4.6 exonuclease I compare
PS417_02765 -1.7 -1.4 phosphate starvation-inducible protein PsiF compare
PS417_02560 -1.7 -1.3 23S rRNA methyltransferase compare
PS417_22520 -1.7 -1.5 histidine kinase compare
PS417_23545 -1.7 -1.9 gamma-glutamyl kinase compare
PS417_26660 -1.7 -3.3 protein PilI compare
PS417_13855 -1.7 -1.1 acetyl-CoA acetyltransferase compare
PS417_24800 -1.7 -3.2 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PS417_15915 -1.7 -1.3 hypothetical protein compare
PS417_07940 -1.7 -1.8 hypothetical protein compare
PS417_23015 -1.7 -1.5 NGG1p interacting factor 3 protein, NIF3 compare
PS417_01560 -1.7 -1.9 imidazoleglycerol-phosphate dehydratase compare
PS417_11075 -1.6 -2.8 hydroxypyruvate isomerase compare
PS417_23770 -1.6 -1.0 exodeoxyribonuclease V subunit alpha compare
PS417_19865 -1.6 -7.4 flagellar hook protein FlgK compare
PS417_22990 -1.6 -1.2 iron dicitrate transport regulator FecR compare
PS417_08090 -1.6 -0.8 3-oxoacyl-ACP reductase compare
PS417_06620 -1.6 -1.9 hypothetical protein compare
PS417_21570 -1.6 -4.0 flagellar basal body rod protein FlgB compare
PS417_21585 -1.6 -8.4 flagellar basal body P-ring biosynthesis protein FlgA compare
PS417_17735 -1.6 -2.1 LacI family transcriptional regulator compare
PS417_11060 -1.6 -2.5 transporter compare
PS417_23385 -1.6 -6.0 cytochrome o ubiquinol oxidase subunit I compare
PS417_08985 -1.6 -3.6 histidine kinase compare
PS417_22565 -1.6 -0.6 formyltetrahydrofolate deformylase compare
PS417_17610 -1.6 -1.0 AsnC family transcriptional regulator compare
PS417_00900 -1.5 -1.5 4-aminobutyrate aminotransferase compare
PS417_06745 -1.5 -1.3 polysaccharide deacetylase compare
PS417_26730 -1.5 -0.6 pyrroline-5-carboxylate reductase compare
PS417_08585 -1.5 -1.7 ATPase AAA compare
PS417_19860 -1.5 -8.5 flagellar hook protein FlgL compare
PS417_18105 -1.5 -0.9 iron-dicitrate transporter substrate-binding subunit compare
PS417_00370 -1.5 -0.7 hypothetical protein compare
PS417_14890 -1.5 -2.3 LysR family transcriptional regulator compare
PS417_27605 -1.5 -3.1 hypothetical protein compare
PS417_00045 -1.5 -1.2 glycerol acyltransferase compare
PS417_05365 -1.5 -1.5 FAD-binding protein compare
PS417_17930 -1.5 -1.9 aldehyde dehydrogenase compare
PS417_26470 -1.5 -1.5 cytochrome C compare
PS417_11830 -1.4 -2.1 membrane protein compare
PS417_06675 -1.4 -2.4 ATP-dependent helicase compare
PS417_02720 -1.4 -0.7 TetR family transcriptional regulator compare
PS417_19790 -1.4 -2.3 ATP synthase compare
PS417_10575 -1.4 -1.8 DNA alkylation repair protein compare
PS417_19740 -1.4 -4.3 flagellar biosynthesis protein flip compare
PS417_27055 -1.4 -1.9 hypothetical protein compare
PS417_11415 -1.4 -1.6 hypothetical protein compare
PS417_03385 -1.4 -0.9 flavin reductase compare
PS417_17855 -1.4 -2.1 major facilitator transporter compare
PS417_26260 -1.4 -1.1 hypothetical protein compare
PS417_23375 -1.4 -1.3 cytochrome C oxidase compare
PS417_26815 -1.4 -1.6 peptidase M16 compare
PS417_03340 -1.4 -2.5 gluconate transporter compare
PS417_19285 -1.4 -1.3 ankyrin compare
PS417_23025 -1.4 -3.1 murein transglycosylase compare
PS417_26655 -1.3 -2.3 chemotaxis protein compare
PS417_23380 -1.3 -1.2 cytochrome o ubiquinol oxidase subunit III compare
PS417_28080 -1.3 -8.4 phosphate ABC transporter permease compare
PS417_13795 -1.3 -4.1 UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
PS417_02555 -1.3 -7.6 exoribonuclease R compare
PS417_15480 -1.3 -1.4 ABC transporter substrate-binding protein compare
PS417_00430 -1.3 -3.1 endonuclease compare
PS417_18165 -1.3 -2.4 membrane protein compare
PS417_16370 -1.3 -3.7 chemotaxis protein CheY compare
PS417_24575 -1.3 -0.9 hypothetical protein compare
PS417_11015 -1.3 -2.0 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data) compare
PS417_23915 -1.3 -3.0 pantoate--beta-alanine ligase compare
PS417_03145 -1.3 -1.8 acetyl-CoA acetyltransferase compare
PS417_19735 -1.3 -3.1 flagellar biosynthesis protein FliQ compare
PS417_02415 -1.3 -1.8 phosphoserine phosphatase compare
PS417_23755 -1.3 -1.9 membrane protein compare
PS417_22450 -1.3 -0.8 ATP-dependent DNA helicase RuvA compare
PS417_14065 -1.3 -3.2 UTP--glucose-1-phosphate uridylyltransferase compare
PS417_11615 -1.3 -1.1 urea ABC transporter ATP-binding protein compare
PS417_08770 -1.3 -2.3 hypothetical protein compare
PS417_00085 -1.3 -1.4 16S rRNA methyltransferase compare
PS417_24885 -1.3 -1.7 transcriptional regulator compare
PS417_17400 -1.3 -2.2 TetR family transcriptional regulator compare
PS417_26270 -1.3 -2.1 AraC family transcriptional regulator compare
PS417_27595 -1.3 -1.1 recombinase XerC compare
PS417_15495 -1.3 -1.6 FAD-dependent oxidoreductase compare
PS417_04300 -1.3 -2.1 FagA protein compare
PS417_11485 -1.3 -1.2 AraC family transcriptional regulator compare
PS417_05635 -1.3 -4.9 membrane protein compare
PS417_27555 -1.2 -1.8 DNA-binding protein compare
PS417_18545 -1.2 -2.0 cell division protein compare
PS417_11185 -1.2 -2.0 dimethylallyltransferase compare
PS417_21845 -1.2 -1.9 membrane protein compare
PS417_21065 -1.2 -1.6 3-methylitaconate isomerase compare
PS417_13445 -1.2 -0.9 D-aminopeptidase compare
PS417_19190 -1.2 -2.6 BolA family transcriptional regulator compare
PS417_03515 -1.2 -1.1 type III secretion protein compare
PS417_10095 -1.2 -1.2 hypothetical protein compare
PS417_19710 -1.2 -4.6 flagellar biosynthesis protein FlhA compare
PS417_15650 -1.2 -1.3 glutamine amidotransferase compare
PS417_15975 -1.2 -0.8 glutamate carboxypeptidase compare
PS417_00925 -1.2 -1.2 hypothetical protein compare
PS417_03100 -1.2 -0.8 pilus assembly protein compare
PS417_19795 -1.2 -3.2 flagellar assembly protein FliH compare
PS417_02425 -1.2 -2.8 thiosulfate sulfurtransferase compare
PS417_11725 -1.2 -2.7 peptidase M19 compare
PS417_17120 -1.2 -1.6 protein kinase compare
PS417_12595 -1.2 -1.1 transcriptional regulator compare
PS417_07560 -1.2 -0.7 universal stress protein UspA compare
PS417_06780 -1.2 -2.2 TetR family transcriptional regulator compare
PS417_28405 -1.2 -2.0 hypothetical protein compare
PS417_08745 -1.2 -3.5 hypothetical protein compare
PS417_27870 -1.1 -2.1 ATP-dependent DNA helicase RecG compare
PS417_21595 -1.1 -1.4 flagellar biosynthesis protein FlgN compare
PS417_24710 -1.1 -2.9 lipoprotein compare
PS417_19785 -1.1 -2.2 flagellar biogenesis protein compare
PS417_12650 -1.1 -1.7 magnesium transporter compare
PS417_10405 -1.1 -0.7 filamentous hemagglutinin compare
PS417_19840 -1.1 -5.8 flagellar cap protein FliD compare
PS417_14755 -1.1 -1.2 UV damage repair endonuclease UvdE compare
PS417_02575 -1.1 -1.5 membrane protein compare
PS417_27935 -1.1 -0.7 type VI secretion protein compare
PS417_18990 -1.1 -2.8 membrane protein compare
PS417_24595 -1.1 -7.5 histidine kinase compare
PS417_17645 -1.1 -1.3 RND transporter compare
PS417_24430 -1.1 -0.9 3-dehydroquinate dehydratase compare
PS417_26420 -1.1 -0.8 hypothetical protein compare
PS417_12190 -1.1 -2.4 microcin ABC transporter ATP-binding protein compare
PS417_22550 -1.1 -2.6 ATP-binding protein compare
PS417_07165 -1.1 -2.5 dihydrodipicolinate synthase compare
PS417_15475 -1.1 -1.8 IclR family transcriptional regulator compare
PS417_04050 -1.1 -1.2 peptide ABC transporter ATP-binding protein compare
PS417_10985 -1.1 -0.8 NADH:flavin oxidoreductase compare
PS417_00080 -1.1 -4.2 potassium transporter peripheral membrane component compare
PS417_12245 -1.1 -2.0 GNAT family acetyltransferase compare
PS417_10720 -1.1 -3.4 chemotaxis protein CheY compare
PS417_15110 -1.1 -3.2 protein BatD compare
PS417_18635 -1.1 -1.8 4-hydroxybenzoyl-CoA thioesterase compare
PS417_08365 -1.1 -0.6 hypothetical protein compare
PS417_10040 -1.1 -0.6 MFS transporter compare
PS417_24785 -1.1 -1.1 nucleoside-diphosphate sugar epimerase compare
PS417_17445 -1.1 -2.0 sulfur oxidation protein SoxZ compare
PS417_10725 -1.0 -2.9 excinuclease ABC subunit C compare
PS417_14240 -1.0 -1.4 isochorismatase compare
PS417_15085 -1.0 -2.7 ATPase AAA compare
PS417_28200 -1.0 -1.6 hypothetical protein compare
PS417_00705 -1.0 -0.6 MarR family transcriptional regulator compare
PS417_24745 -1.0 -1.5 gamma-glutamyl phosphate reductase compare


Specific Phenotypes

For 14 genes in this experiment

For phage Kanamycin in Pseudomonas simiae WCS417

For phage Kanamycin across organisms