Experiment set13IT043 for Agrobacterium fabrum C58

Compare to:

Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days

200 most detrimental genes:

  gene name fitness t score description  
Atu0809 +1.2 1.3 hypothetical protein compare
Atu1634 +1.1 2.5 hypothetical protein compare
Atu2187 +1.1 2.1 transcriptional regulator, ArsR family compare
Atu1203 +1.0 2.5 hypothetical protein compare
Atu1191 +1.0 3.0 hypothetical protein compare
Atu3775 +0.9 2.3 hypothetical protein compare
Atu1023 +0.9 2.1 hypothetical protein compare
Atu5164 +0.8 1.3 type IV secretion protein AvhB3 compare
Atu0953 +0.8 1.4 hypothetical protein compare
Atu0295 +0.8 1.1 hypothetical protein compare
Atu2729 +0.7 2.9 hypothetical protein compare
Atu2293 +0.7 2.2 hypothetical protein compare
Atu0924 +0.7 1.2 hypothetical protein compare
Atu3794 +0.7 2.9 FadR family transcriptional regulator compare
Atu2021 +0.7 2.7 transcriptional regulator, AraC family compare
Atu8054 +0.7 0.8 hypothetical protein compare
Atu0854 +0.7 2.7 hypothetical protein compare
Atu1190 +0.7 2.4 hypothetical protein compare
Atu2201 +0.7 1.3 hydrolase compare
Atu0941 +0.6 0.8 hypothetical protein compare
Atu2787 +0.6 1.0 hypothetical protein compare
Atu3252 +0.6 1.7 GntR family transcriptional regulator compare
Atu8023 +0.6 1.5 hypothetical protein compare
Atu1968 +0.6 1.3 hypothetical protein compare
Atu0525 +0.6 2.5 transcriptional regulator, LuxR family compare
Atu2573 +0.6 2.3 hypothetical protein compare
Atu8161 +0.6 1.0 hypothetical protein compare
Atu1490 +0.6 1.6 arsenate reductase compare
Atu5513 +0.6 1.1 cold shock protein compare
Atu8052 +0.6 0.9 hypothetical protein compare
Atu1078 +0.6 2.4 hypothetical protein compare
Atu3619 +0.6 1.6 hypothetical protein compare
Atu4753 +0.6 1.8 amino acid ABC transporter permease compare
Atu1182 +0.6 1.4 hypothetical protein compare
Atu8120 +0.6 1.4 hypothetical protein compare
Atu3447 +0.6 2.1 hypothetical protein compare
Atu3668 +0.6 1.0 siderophore biosynthesis protein compare
Atu4232 +0.5 2.8 GntR family transcriptional regulator compare
Atu8179 +0.5 2.2 hypothetical protein compare
Atu3029 +0.5 3.0 glucarate dehydratase compare
Atu0524 +0.5 2.1 transcriptional regulator, LuxR family compare
Atu0853 +0.5 2.4 hypothetical protein compare
Atu2335 +0.5 1.4 hypothetical protein compare
Atu8057 +0.5 2.4 hypothetical protein compare
Atu0585 +0.5 1.2 hypothetical protein compare
Atu5427 +0.5 2.2 hypothetical protein compare
Atu5115 +0.5 1.1 hypothetical protein compare
Atu4674 +0.5 3.2 GntR family transcriptional regulator compare
Atu2163 +0.5 0.5 hypothetical protein compare
Atu2236 +0.5 2.3 adenine phosphoribosyltransferase compare
Atu2472 +0.5 0.6 hypothetical protein compare
Atu0728 +0.5 2.4 hypothetical protein compare
Atu3575 +0.5 2.4 xylose ABC transporter permease compare
Atu5430 +0.5 0.7 hypothetical protein compare
Atu8166 +0.5 1.5 hypothetical protein compare
Atu4574 +0.5 2.1 dehydrogenase compare
Atu3012 +0.5 0.9 hypothetical protein compare
Atu0755 +0.5 1.2 hypothetical protein compare
Atu3150 +0.5 2.1 sugar ABC transporter permease compare
Atu0690 +0.5 0.9 hypothetical protein compare
Atu2669 +0.4 1.3 RhtB family transporter compare
Atu1066 +0.4 1.5 hypothetical protein compare
Atu1040 +0.4 1.9 MFS permease compare
Atu8187 +0.4 1.8 hypothetical protein compare
Atu0666 +0.4 1.9 glycolate oxidase subunit compare
Atu1667 +0.4 0.9 hypothetical protein compare
Atu2272 +0.4 1.5 hypothetical protein compare
Atu0236 +0.4 1.1 hypothetical protein compare
Atu4159 +0.4 1.1 AsnC family transcriptional regulator compare
Atu1415 +0.4 1.6 3-hydroxyacyl-CoA dehydrogenase type II compare
Atu2396 +0.4 1.1 urease accessory protein compare
Atu3562 +0.4 1.8 hypothetical protein compare
Atu2678 +0.4 2.1 2'-5' RNA ligase compare
Atu3708 +0.4 2.4 outer surface protein compare
Atu2450 +0.4 0.9 hypothetical protein compare
Atu3663 +0.4 0.7 hypothetical protein compare
Atu4160 +0.4 1.6 RNA polymerase sigma factor compare
Atu0763 +0.4 1.2 hydrolase compare
Atu2297 +0.4 2.2 glycosyltransferase compare
Atu3767 +0.4 1.1 diguanylate cyclase compare
Atu0731 +0.4 1.6 divalent cation transporter compare
Atu4411 +0.4 1.3 LysR family transcriptional regulator compare
Atu1501 +0.4 1.5 hypothetical protein compare
Atu3112 +0.4 2.0 sugar ABC transporter permease compare
Atu4884 +0.4 1.1 hypothetical protein compare
Atu2029 +0.4 0.6 hypothetical protein compare
Atu8165 +0.4 1.8 hypothetical protein compare
Atu2368 +0.4 0.8 hypothetical protein compare
Atu3001 +0.4 0.8 hypothetical protein compare
Atu3554 +0.4 1.7 hypothetical protein compare
Atu8087 +0.4 0.5 putative peptidoglycan binding protein compare
Atu1734 +0.4 1.1 hypothetical protein compare
Atu2077 +0.4 1.4 DNA polymerase III, epsilon subunit compare
Atu0375 +0.4 1.0 small heat shock protein compare
Atu0210 +0.4 1.6 hypothetical protein compare
Atu1038 +0.4 0.9 two component response regulator compare
Atu1816 +0.4 2.1 ABC transporter, nucleotide binding/ATPase protein compare
Atu4094 +0.4 1.4 hypothetical protein compare
Atu3180 +0.4 2.4 ABC transporter permease compare
Atu4780 +0.4 2.0 hypothetical protein compare
Atu0870 +0.4 2.3 trans-aconitate methyltransferase compare
Atu0606 +0.4 0.8 hypothetical protein compare
Atu5546 +0.4 2.5 LysR family transcriptional regulator compare
Atu0319 +0.4 0.6 ubiquinone biosynthesis protein compare
Atu4659 +0.4 1.7 AraC family transcriptional regulator compare
Atu1849 +0.4 1.5 hypothetical protein compare
Atu5497 +0.4 2.3 hypothetical protein compare
Atu8186 +0.4 2.5 cellulose synthesis protein compare
Atu3473 +0.4 2.1 2-oxoisovalerate dehydrogenase subunit alpha compare
Atu4409 +0.4 1.8 periplasmic nitrate reductase small subunit compare
Atu4132 +0.4 1.8 AraC family transcriptional regulator compare
Atu4143 +0.4 1.6 hypothetical protein compare
Atu6026 +0.4 1.8 ABC transporter, membrane spanning protein (nopaline) compare
Atu1525 +0.4 1.2 hypothetical protein compare
Atu0250 +0.4 1.9 hypothetical protein compare
Atu3425 +0.4 2.0 hypothetical protein compare
Atu3011 +0.4 0.7 ArsR family transcriptional regulator compare
Atu2410 +0.4 1.5 ABC transporter, nucleotide binding/ATPase protein (urea/amide) compare
Atu2020 +0.4 1.5 transcriptional regulator, TetR family compare
Atu1410 +0.4 1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu3759 +0.4 0.7 hypothetical protein compare
Atu0348 +0.4 1.5 hypothetical protein compare
Atu8025 +0.4 0.7 hypothetical protein compare
Atu2496 +0.4 1.9 nitroreducatase compare
Atu4882 +0.4 0.6 hypothetical protein compare
Atu3183 +0.4 0.4 hypothetical protein compare
Atu4137 +0.4 1.8 hypothetical protein compare
Atu0640 +0.4 1.0 hypothetical protein compare
Atu0847 +0.4 1.7 organic hydroperoxide resistance protein compare
Atu4548 +0.4 2.0 3-oxoadipate CoA-transferase subunit B compare
Atu1520 +0.4 1.7 ABC transporter, nucleotide binding/ATPase protein (zinc) compare
Atu5011 +0.4 2.2 polyketide biosynthesis dithiol-disulfide isomerase compare
Atu3344 +0.4 1.8 radical activating protein compare
Atu3032 +0.4 1.4 hypothetical protein compare
Atu1326 +0.4 1.9 acetyltransferase compare
Atu4271 +0.4 1.8 LysR family transcriptional regulator compare
Atu1640 +0.3 1.7 hypothetical protein compare
Atu2234 +0.3 0.9 hypothetical protein compare
Atu0627 +0.3 1.4 carboxymethylenebutenolidase compare
Atu1009 +0.3 0.7 hypothetical protein compare
Atu5172 +0.3 2.3 type IV secretion protein AvhB11 compare
Atu8024 +0.3 1.8 hypothetical protein compare
Atu1660 +0.3 1.2 hypothetical protein compare
Atu1880 +0.3 1.4 ABC transporter, membrane spanning protein (amino acid) compare
Atu2473 +0.3 2.0 ABC transporter, substrate binding protein compare
Atu0777 +0.3 0.4 hypothetical protein compare
Atu1728 +0.3 1.9 TrpR binding protein WrbA compare
Atu0955 +0.3 1.3 hypothetical protein compare
Atu3666 +0.3 2.1 hypothetical protein compare
Atu5019 +0.3 2.0 hypothetical protein compare
Atu3175 +0.3 1.8 hypothetical protein compare
Atu3597 +0.3 1.7 3-hydroxybutyryl-CoA dehydrogenase compare
Atu0997 +0.3 1.0 hypothetical protein compare
Atu1005 +0.3 1.3 hypothetical protein compare
Atu4328 +0.3 2.0 hypothetical protein compare
Atu0938 +0.3 1.1 transcriptional regulator, MerR family compare
Atu4284 +0.3 1.7 amino acid ABC transporter substrate-binding protein compare
Atu1884 +0.3 1.6 ABC transporter, substrate binding protein (aliphatic sulfonate) compare
Atu2357 +0.3 1.7 hypothetical protein compare
Atu5529 +0.3 2.1 two component sensor kinase compare
Atu4227 +0.3 1.5 amidophosphoribosyltransferase compare
Atu0696 +0.3 1.1 phosphatase compare
Atu4469 +0.3 0.5 iron ABC transporter permease compare
Atu0165 +0.3 1.4 hypothetical protein compare
Atu6181 +0.3 1.7 virA/G regulated topoisomerase compare
Atu0152 +0.3 0.7 hypothetical protein compare
Atu3957 +0.3 1.2 glycine-betaine ABC transporter substrate-binding protein compare
Atu5089 +0.3 1.7 hypothetical protein compare
Atu1480 +0.3 1.3 hypothetical protein compare
Atu0276 +0.3 1.2 hypothetical protein compare
Atu3472 +0.3 1.1 2-oxoisovalerate dehydrogenase subunit beta compare
Atu0886 +0.3 0.4 hypothetical protein compare
Atu5462 +0.3 1.1 ABC transporter nucleotide binding/ATPase compare
Atu2683 +0.3 0.7 hypothetical protein compare
Atu2384 +0.3 0.9 transcriptional regulator, TetR family compare
Atu3537 +0.3 1.1 hypothetical protein compare
Atu4270 +0.3 2.0 hypothetical protein compare
Atu2694 +0.3 0.9 hypothetical protein compare
Atu4165 +0.3 1.5 hypothetical protein compare
Atu4087 +0.3 2.0 zinc-binding dehydrogenase compare
Atu1782 +0.3 1.0 hypothetical protein compare
Atu4399 +0.3 2.1 hypothetical protein compare
Atu1994 +0.3 1.1 acyl-CoA hydrolase compare
Atu2069 +0.3 1.0 hypothetical protein compare
Atu2080 +0.3 1.3 acetyltransferase compare
Atu1059 +0.3 2.2 hypothetical protein compare
Atu3894 +0.3 1.9 sugar ABC transporter permease compare
Atu3309 +0.3 2.4 cellulose synthase compare
Atu4053 +0.3 0.6 succinoglycan biosynthesis protein compare
Atu3521 +0.3 1.3 permease compare
Atu1975 +0.3 1.4 hypothetical protein compare
Atu1249 +0.3 1.7 hypothetical protein compare
Atu4650 +0.3 1.5 sugar ABC transporter ATPase compare
Atu3427 +0.3 1.1 hypothetical protein compare
Atu0209 +0.3 1.8 hypothetical protein compare
Atu3920 +0.3 1.6 hypothetical protein compare
Atu4109 +0.3 1.2 hypothetical protein compare
Atu3566 +0.3 1.1 hypothetical protein compare
Atu4071 +0.3 1.7 hypothetical protein compare
Atu1317 +0.3 1.4 metal dependent hydrolase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in in planta experiments

For in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days across organisms