| | gene | name | fitness | t score | description | |
|---|
| b0958 | sulA | +3.8 | 16.2 | SOS cell division inhibitor (NCBI) | compare |
| b0912 | ihfB | +2.9 | 7.9 | integration host factor subunit beta (NCBI) | compare |
| b3493 | pitA | +2.8 | 19.3 | phosphate transporter, low-affinity (NCBI) | compare |
| b2518 | ndk | +2.7 | 6.0 | nucleoside diphosphate kinase (NCBI) | compare |
| b0092 | ddlB | +2.6 | 11.0 | D-alanylalanine synthetase (NCBI) | compare |
| b1235 | rssB | +2.3 | 12.6 | response regulator of RpoS (NCBI) | compare |
| b1349 | recT | +2.1 | 8.8 | Rac prophage; recombination and repair protein (NCBI) | compare |
| b3806 | cyaA | +2.0 | 8.1 | adenylate cyclase (NCBI) | compare |
| b1841 | yobA | +1.8 | 4.1 | hypothetical protein (NCBI) | compare |
| b4538 | yoeF | +1.8 | 2.8 | hypothetical protein (RefSeq) | compare |
| b2909 | ygfB | +1.7 | 7.4 | orf, hypothetical protein (VIMSS) | compare |
| b4042 | dgkA | +1.7 | 3.7 | diacylglycerol kinase (NCBI) | compare |
| b1840 | yebZ | +1.7 | 6.5 | predicted inner membrane protein (NCBI) | compare |
| b1540 | ydfH | +1.6 | 1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0059 | hepA | +1.6 | 10.4 | ATP-dependent helicase HepA (NCBI) | compare |
| b1712 | ihfA | +1.6 | 2.7 | integration host factor subunit alpha (NCBI) | compare |
| b1286 | rnb | +1.6 | 3.6 | exoribonuclease II (NCBI) | compare |
| b2516 | yfgA | +1.4 | 5.7 | hypothetical protein (NCBI) | compare |
| b0432 | cyoA | +1.4 | 9.2 | cytochrome o ubiquinol oxidase subunit II (NCBI) | compare |
| b3844 | fre | +1.4 | 6.4 | NAD(P)H-flavin reductase (NCBI) | compare |
| b1823 | cspC | +1.4 | 3.0 | stress protein, member of the CspA-family (NCBI) | compare |
| b2299 | yfcD | +1.4 | 6.8 | predicted NUDIX hydrolase (NCBI) | compare |
| b0428 | cyoE | +1.3 | 7.4 | protoheme IX farnesyltransferase (NCBI) | compare |
| b2281 | nuoI | +1.3 | 3.0 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2218 | rcsC | +1.3 | 8.2 | hybrid sensory kinase in two-component regulatory system with RcsB and YojN (RefSeq) | compare |
| b2906 | visC | +1.3 | 5.9 | hypothetical protein (NCBI) | compare |
| b0632 | dacA | +1.3 | 5.6 | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) (NCBI) | compare |
| b1109 | ndh | +1.2 | 5.0 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b0429 | cyoD | +1.2 | 4.2 | cytochrome o ubiquinol oxidase subunit IV (NCBI) | compare |
| b3871 | bipA | +1.2 | 9.3 | GTP-binding protein (NCBI) | compare |
| b1246 | oppD | +1.2 | 5.5 | oligopeptide transporter ATP-binding component (NCBI) | compare |
| b3229 | sspA | +1.2 | 3.4 | stringent starvation protein A (NCBI) | compare |
| b3398 | yrfF | +1.2 | 3.2 | predicted inner membrane protein (NCBI) | compare |
| b4207 | fklB | +1.2 | 4.2 | FKBP-type 22KD peptidyl-prolyl cis-trans isomerase (rotamase) (VIMSS) | compare |
| b4596 | yciZ | +1.1 | 1.6 | hypothetical protein (RefSeq) | compare |
| b2479 | gcvR | +1.1 | 4.3 | transcriptional regulation of gcv operon (VIMSS) | compare |
| b2948 | yqgE | +1.1 | 5.0 | orf, hypothetical protein (VIMSS) | compare |
| b2284 | nuoF | +1.1 | 4.3 | NADH:ubiquinone oxidoreductase, chain F (NCBI) | compare |
| b4234 | yjgA | +1.1 | 3.4 | hypothetical protein (NCBI) | compare |
| b1138 | ymfE | +1.1 | 1.7 | e14 prophage; predicted inner membrane protein (NCBI) | compare |
| b2502 | ppx | +1.1 | 7.1 | exopolyphosphatase (NCBI) | compare |
| b2216 | rcsD | +1.1 | 6.9 | phosphotransfer intermediate protein in two-component regulatory system with RcsBC (NCBI) | compare |
| b1247 | oppF | +1.1 | 4.5 | oligopeptide transporter subunit (NCBI) | compare |
| b1850 | eda | +1.1 | 2.0 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0502 | ylbG | +1.1 | 2.9 | no description | compare |
| b1920 | fliY | +1.0 | 2.6 | cystine transporter subunit (NCBI) | compare |
| b2911 | ssrS | +1.0 | 1.1 | 6S regulatory RNA (NCBI) | compare |
| b0081 | mraZ | +1.0 | 3.1 | hypothetical protein (NCBI) | compare |
| b3636 | rpmG | +1.0 | 1.5 | 50S ribosomal protein L33 (NCBI) | compare |
| b2684 | mprA | +1.0 | 4.4 | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux (NCBI) | compare |
| b2283 | nuoG | +1.0 | 5.1 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b2279 | nuoK | +1.0 | 2.4 | NADH dehydrogenase subunit K (NCBI) | compare |
| b4701 | sokX | +1.0 | 0.6 | sok-related sRNA, function unknown (RefSeq) | compare |
| b4522 | yciX_1 | +1.0 | 2.2 | hypothetical protein (NCBI) | compare |
| b1103 | ycfF | +0.9 | 1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1284 | yciT | +0.9 | 3.8 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2287 | nuoB | +0.9 | 2.6 | NADH dehydrogenase subunit B (NCBI) | compare |
| b1244 | oppB | +0.9 | 4.0 | oligopeptide permease ABC transporter membrane protein (NCBI) | compare |
| b0580 | ybdJ | +0.9 | 2.1 | predicted inner membrane protein (NCBI) | compare |
| b1465 | narV | +0.9 | 2.1 | nitrate reductase 2 (NRZ), gamma subunit (NCBI) | compare |
| b1242 | ychE | +0.9 | 2.4 | predicted inner membrane protein (NCBI) | compare |
| b2426 | ucpA | +0.9 | 2.1 | putative oxidoreductase (VIMSS) | compare |
| b0430 | cyoC | +0.9 | 3.2 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b3199 | yrbK | +0.9 | 1.9 | hypothetical protein (NCBI) | compare |
| b4511 | ybdZ | +0.9 | 1.8 | hypothetical protein (NCBI) | compare |
| b2277 | nuoM | +0.9 | 4.5 | NADH dehydrogenase subunit M (NCBI) | compare |
| b4066 | yjcF | +0.9 | 0.5 | hypothetical protein (NCBI) | compare |
| b1245 | oppC | +0.8 | 3.8 | oligopeptide transporter subunit (NCBI) | compare |
| b0226 | dinJ | +0.8 | 2.5 | predicted antitoxin of YafQ-DinJ toxin-antitoxin system (NCBI) | compare |
| b1104 | ycfL | +0.8 | 1.5 | hypothetical protein (NCBI) | compare |
| b1557 | cspB | +0.8 | 1.1 | Qin prophage; cold shock protein (NCBI) | compare |
| b2282 | nuoH | +0.8 | 2.7 | NADH dehydrogenase subunit H (NCBI) | compare |
| b1231 | tyrT | +0.8 | 0.7 | tRNA-Tyr (NCBI) | compare |
| b2285 | nuoE | +0.8 | 1.7 | NADH dehydrogenase subunit E (NCBI) | compare |
| b1162 | ycgE | +0.8 | 3.7 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3071 | yqjI | +0.8 | 2.2 | predicted transcriptional regulator (NCBI) | compare |
| b3354 | yheU | +0.8 | 3.9 | hypothetical protein (NCBI) | compare |
| b4655 | ythA | +0.8 | 1.3 | expressed protein (RefSeq) | compare |
| b1317 | ycjU | +0.8 | 3.2 | predicted beta-phosphoglucomutase (NCBI) | compare |
| b0720 | gltA | +0.8 | 3.4 | citrate synthase (NCBI) | compare |
| b1243 | oppA | +0.8 | 2.6 | oligopeptide transporter subunit (NCBI) | compare |
| b0880 | cspD | +0.8 | 2.0 | cold shock protein homolog (NCBI) | compare |
| b0431 | cyoB | +0.8 | 5.3 | cytochrome o ubiquinol oxidase subunit I (NCBI) | compare |
| b0641 | rlpB | +0.8 | 2.0 | minor lipoprotein (NCBI) | compare |
| b1307 | pspD | +0.8 | 1.4 | peripheral inner membrane phage-shock protein (NCBI) | compare |
| b4068 | yjcH | +0.7 | 2.3 | required for glycolate transport, with actP (from data) | compare |
| b3184 | yhbE | +0.7 | 4.0 | conserved inner membrane protein (NCBI) | compare |
| b2022 | hisB | +0.7 | 2.7 | imidazoleglycerolphosphate dehydratase and histidinol-phosphate phosphatase (VIMSS) | compare |
| b0437 | clpP | +0.7 | 1.9 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b1279 | yciS | +0.7 | 0.7 | conserved inner membrane protein (NCBI) | compare |
| b4502 | yeiW | +0.7 | 2.0 | hypothetical protein (NCBI) | compare |
| b1608 | rstA | +0.7 | 2.5 | DNA-binding response regulator in two-component regulatory system with RstB (RefSeq) | compare |
| b1180 | ycgM | +0.7 | 2.3 | predicted isomerase/hydrolase (NCBI) | compare |
| b1633 | nth | +0.7 | 3.3 | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) (NCBI) | compare |
| b1199 | dhaL | +0.7 | 3.1 | dihydroxyacetone kinase, C-terminal domain (NCBI) | compare |
| b1671 | ydhX | +0.7 | 1.1 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b0781 | moaA | +0.7 | 3.4 | molybdenum cofactor biosynthesis protein A (NCBI) | compare |
| b3183 | obgE | +0.7 | 1.0 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b3784 | rfe | +0.7 | 4.4 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b2450 | yffS | +0.7 | 0.9 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1936 | intG | +0.7 | 0.5 | predicted defective phage integrase (pseudogene) (RefSeq) | compare |
| b3973 | birA | +0.7 | 1.4 | biotin--protein ligase (NCBI) | compare |
| b2093 | gatB | +0.7 | 1.2 | galactitol-specific enzyme IIB component of PTS (NCBI) | compare |
| b4408 | csrB | +0.7 | 1.9 | CsrA-binding sRNA, antagonizing CsrA regulation (NCBI) | compare |
| b1361 | ydaW | +0.7 | 0.2 | orf, hypothetical protein (VIMSS) | compare |
| b1891 | flhC | +0.7 | 2.5 | DNA-binding transcriptional dual regulator with FlhD (NCBI) | compare |
| b1478 | adhP | +0.7 | 1.7 | alcohol dehydrogenase (VIMSS) | compare |
| b2419 | yfeK | +0.7 | 1.4 | hypothetical protein (NCBI) | compare |
| b4451 | ryhB | +0.7 | 1.1 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b2726 | hypA | +0.6 | 2.3 | protein involved in nickel insertion into hydrogenases 3 (NCBI) | compare |
| b2071 | yegJ | +0.6 | 1.3 | hypothetical protein (NCBI) | compare |
| b2672 | ygaM | +0.6 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b0102 | yacF | +0.6 | 2.9 | hypothetical protein (NCBI) | compare |
| b0965 | b0965 | +0.6 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b4606 | ypfM | +0.6 | 1.4 | hypothetical protein (RefSeq) | compare |
| b1926 | fliT | +0.6 | 1.7 | predicted chaperone (NCBI) | compare |
| b0998 | torD | +0.6 | 0.8 | chaperone protein TorD (NCBI) | compare |
| b4627 | ykfL | +0.6 | 1.8 | no description | compare |
| b0853 | ybjN | +0.6 | 2.8 | predicted oxidoreductase (NCBI) | compare |
| b1804 | rnd | +0.6 | 2.5 | ribonuclease D (NCBI) | compare |
| b1044 | ymdA | +0.6 | 2.9 | hypothetical protein (NCBI) | compare |
| b3834 | yigP | +0.6 | 2.7 | hypothetical protein (NCBI) | compare |
| b1273 | yciN | +0.6 | 1.2 | hypothetical protein (NCBI) | compare |
| b0934 | ycbM | +0.6 | 1.4 | putative transport system permease protein (VIMSS) | compare |
| b4180 | rlmB | +0.6 | 2.9 | 23S rRNA (Gm2251)-methyltransferase (NCBI) | compare |
| b2446 | yffO | +0.6 | 1.4 | CPZ-55 prophage; predicted protein (NCBI) | compare |
| b1238 | tdk | +0.6 | 2.2 | thymidine kinase (NCBI) | compare |
| b1782 | mipA | +0.6 | 2.1 | scaffolding protein for murein synthesizing machinery (NCBI) | compare |
| b1073 | flgB | +0.6 | 1.6 | flagellar basal-body rod protein B (NCBI) | compare |
| b1883 | cheB | +0.6 | 1.7 | chemotaxis-specific methylesterase (NCBI) | compare |
| b2807 | ygdD | +0.6 | 1.9 | conserved inner membrane protein (NCBI) | compare |
| b0289 | yagV | +0.6 | 2.3 | orf, hypothetical protein (VIMSS) | compare |
| b2673 | nrdH | +0.6 | 1.3 | glutaredoxin-like protein (NCBI) | compare |
| b1348 | lar | +0.6 | 1.1 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b1456 | rhsE | +0.6 | 2.5 | rhsE element core protein RshE (RefSeq) | compare |
| b1379 | hslJ | +0.6 | 1.5 | heat-inducible protein (NCBI) | compare |
| b4653 | yicT | +0.6 | 1.6 | no description | compare |
| b3182 | dacB | +0.6 | 4.0 | D-alanyl-D-alanine carboxypeptidase (NCBI) | compare |
| b4210 | ytfF | +0.6 | 3.6 | predicted inner membrane protein (RefSeq) | compare |
| b4646 | yrdE | +0.6 | 1.4 | no description | compare |
| b3810 | yigA | +0.6 | 3.6 | hypothetical protein (NCBI) | compare |
| b4196 | ulaD | +0.6 | 2.1 | 3-keto-L-gulonate 6-phosphate decarboxylase (NCBI) | compare |
| b1754 | b1754 | +0.6 | 1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1438 | ydcQ | +0.6 | 1.2 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b2636 | b2636 | +0.5 | 2.4 | orf, hypothetical protein (VIMSS) | compare |
| b2377 | yfdY | +0.5 | 1.6 | predicted inner membrane protein (NCBI) | compare |
| b1939 | fliG | +0.5 | 1.4 | flagellar motor switch protein G (NCBI) | compare |
| b3210 | arcB | +0.5 | 2.7 | hybrid sensory histidine kinase in two-component regulatory system with ArcA (NCBI) | compare |
| b2466 | ypfG | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b1426 | ydcH | +0.5 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b4577 | sgrS | +0.5 | 1.1 | small antisense RNA (NCBI) | compare |
| b1214 | ychA | +0.5 | 2.5 | predicted transcriptional regulator (NCBI) | compare |
| b2708 | gutQ | +0.5 | 2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4360 | yjjA | +0.5 | 1.5 | putative glycoprotein/receptor (VIMSS) | compare |
| b1948 | fliP | +0.5 | 2.0 | flagellar biosynthesis protein P (NCBI) | compare |
| b0494 | tesA | +0.5 | 2.9 | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 (NCBI) | compare |
| b2280 | nuoJ | +0.5 | 2.7 | NADH dehydrogenase subunit J (NCBI) | compare |
| b3658 | selC | +0.5 | 1.9 | tRNA-Sec (NCBI) | compare |
| b2955 | yggW | +0.5 | 2.8 | coproporphyrinogen III oxidase (NCBI) | compare |
| b4381 | deoC | +0.5 | 2.6 | deoxyribose-phosphate aldolase (NCBI) | compare |
| b4410 | ecnA | +0.5 | 0.9 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b0784 | moaD | +0.5 | 2.1 | molybdopterin synthase, small subunit (NCBI) | compare |
| b0550 | rusA | +0.5 | 1.3 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b4075 | nrfF | +0.5 | 2.5 | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF (NCBI) | compare |
| b2555 | yfhG | +0.5 | 2.4 | hypothetical protein (NCBI) | compare |
| b0588 | fepC | +0.5 | 2.4 | iron-enterobactin transporter subunit (NCBI) | compare |
| b0765 | modC | +0.5 | 2.1 | molybdate transporter subunit (NCBI) | compare |
| b0775 | bioB | +0.5 | 1.9 | biotin synthase (NCBI) | compare |
| b3129 | sohA | +0.5 | 1.7 | predicted regulator (NCBI) | compare |
| b3920 | yiiQ | +0.5 | 2.5 | hypothetical protein (NCBI) | compare |
| b4246 | pyrL | +0.5 | 1.3 | pyrBI operon leader peptide (NCBI) | compare |
| b1418 | cybB | +0.5 | 1.5 | cytochrome b(561) (VIMSS) | compare |
| b2063 | yegH | +0.5 | 2.3 | putative transport protein (VIMSS) | compare |
| b0617 | citD | +0.5 | 1.1 | citrate lyase, acyl carrier (gamma) subunit (NCBI) | compare |
| b4222 | ytfP | +0.5 | 2.3 | hypothetical protein (NCBI) | compare |
| b4532 | yncN | +0.5 | 1.3 | orf, hypothetical protein (VIMSS) | compare |
| b2823 | ppdC | +0.5 | 2.2 | hypothetical protein (NCBI) | compare |
| b2422 | cysA | +0.5 | 2.4 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b1467 | narY | +0.5 | 2.1 | nitrate reductase 2 (NRZ), beta subunit (NCBI) | compare |
| b2258 | b2258 | +0.5 | 0.5 | putative transport/receptor protein (VIMSS) | compare |
| b0977 | hyaF | +0.5 | 1.6 | protein involved in nickel incorporation into hydrogenase-1 proteins (NCBI) | compare |
| b2676 | nrdF | +0.5 | 2.2 | ribonucleotide-diphosphate reductase beta subunit (NCBI) | compare |
| b3352 | yheS | +0.5 | 3.7 | fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) | compare |
| b2561 | yfhH | +0.5 | 3.0 | orf, hypothetical protein (VIMSS) | compare |
| b0590 | fepD | +0.5 | 3.0 | iron-enterobactin transporter subunit (NCBI) | compare |
| b1234 | rssA | +0.5 | 1.5 | conserved protein (RefSeq) | compare |
| b1562 | hokD | +0.5 | 1.2 | Qin prophage; small toxic polypeptide (NCBI) | compare |
| b1572 | ydfB | +0.5 | 0.8 | orf, hypothetical protein (VIMSS) | compare |
| b4699 | fnrS | +0.5 | 0.4 | FNR-activated anaerobic sRNA antisense regulator down regulates cydDC, metE, sodA, sodB, Hfq-dependent; mediates negative FNR regulation (RefSeq) | compare |
| b2278 | nuoL | +0.5 | 3.2 | NADH dehydrogenase subunit L (NCBI) | compare |
| b1159 | mcrA | +0.5 | 0.6 | e14 prophage; 5-methylcytosine-specific restriction endonuclease B (NCBI) | compare |
| b3740 | gidB | +0.5 | 3.1 | glucose-inhibited division protein B (NCBI) | compare |
| b1020 | phoH | +0.5 | 2.1 | conserved protein with nucleoside triphosphate hydrolase domain (NCBI) | compare |
| b3181 | greA | +0.5 | 1.8 | transcription elongation factor: cleaves 3' nucleotide of paused mRNA (VIMSS) | compare |
| b2204 | napH | +0.5 | 1.7 | quinol dehydrogenase membrane component (NCBI) | compare |
| b1622 | malY | +0.5 | 1.8 | bifunctional beta-cystathionase, PLP-dependent/ regulator of maltose regulon (NCBI) | compare |
| b2771 | ygcS | +0.5 | 1.8 | putative transport protein (VIMSS) | compare |
| b3574 | yiaJ | +0.5 | 2.1 | predicted DNA-binding transcriptional repressor (NCBI) | compare |
| b2993 | hybD | +0.5 | 1.8 | predicted maturation element for hydrogenase 2 (NCBI) | compare |
| b1710 | btuE | +0.5 | 2.3 | predicted glutathione peroxidase (NCBI) | compare |