Experiment set13IT025 for Agrobacterium fabrum C58

Compare to:

LB_arabidopsis_leaf

200 most important genes:

  gene name fitness t score description  
Atu4317 -2.6 -4.8 TetR family transcriptional regulator compare
Atu3763 -2.1 -1.4 hypothetical protein compare
Atu0184 -2.1 -4.1 glucokinase compare
Atu2125 -2.0 -2.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu0784 -1.9 -4.1 hypothetical protein compare
Atu6189 -1.9 -2.4 protein secretion chaperone compare
Atu0141 -1.7 -2.2 cytochrome O ubiquinol oxidase subunit I compare
Atu3469 -1.7 -3.1 phosphoglyceromutase compare
Atu0953 -1.6 -1.6 hypothetical protein compare
Atu0040 -1.5 -1.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu1810 -1.4 -0.8 hypothetical protein compare
Atu4072 -1.4 -1.7 nodulation protein N compare
Atu2620 -1.4 -1.8 hypothetical protein compare
Atu0769 -1.4 -1.5 protoheme IX farnesyltransferase compare
Atu0331 -1.4 -3.0 sigma-54 modulation protein compare
Atu4148 -1.4 -6.1 UDP-glucuronic acid epimerase compare
Atu0188 -1.3 -3.5 ABC transporter, membrane spanning protein (peptide) compare
Atu2439 -1.3 -1.4 hypothetical protein compare
Atu4149 -1.2 -8.5 UDP-glucose 6-dehydrogenase compare
Atu1685 -1.2 -1.4 hypothetical protein compare
Atu2583 -1.2 -8.3 glycosyltransferase compare
Atu2584 -1.2 -4.8 hypothetical protein compare
Atu2585 -1.2 -4.8 hypothetical protein compare
Atu2592 -1.2 -5.2 hypothetical protein compare
Atu2590 -1.1 -5.9 hypothetical protein compare
Atu2582 -1.1 -5.3 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2591 -1.1 -5.4 glucosyltransferase compare
Atu5470 -1.1 -1.6 hypothetical protein compare
Atu2728 -1.1 -2.8 beta (1-->2) glucan export ATP-binding protein compare
Atu1679 -1.0 -1.9 peptidyl prolyl cis-trans isomerase compare
Atu2577 -1.0 -7.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu1581 -1.0 -2.1 hypothetical protein compare
Atu4217 -1.0 -1.1 TetR family transcriptional regulator compare
Atu2433 -1.0 -1.4 hypothetical protein compare
Atu3730 -1.0 -1.1 hypothetical protein compare
Atu4677 -0.9 -1.6 hypothetical protein compare
Atu1683 -0.9 -1.6 hypothetical protein compare
Atu2606 -0.9 -4.7 transcriptional regulator, GntR family compare
Atu3162 -0.9 -5.5 LacI family transcriptional regulator compare
Atu1495 -0.9 -2.6 hypothetical protein compare
Atu1099 -0.9 -3.9 hypothetical protein compare
Atu5430 -0.9 -1.0 hypothetical protein compare
Atu8162 -0.9 -1.2 hypothetical protein compare
Atu3727 -0.9 -3.5 hypothetical protein compare
Atu3017 -0.9 -1.4 phosphoglyceromutase compare
Atu0894 -0.8 -1.7 ABC transporter, membrane spanning protein compare
Atu0142 -0.8 -1.8 cytochrome o ubiquinol oxidase subunit II compare
Atu1039 -0.8 -3.1 DNA repair protein RecO compare
Atu0971 -0.8 -2.1 two component sensor kinase compare
Atu0703 -0.8 -1.9 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
Atu3496 -0.8 -2.5 hypothetical protein compare
Atu4144 -0.8 -1.2 hypothetical protein compare
Atu0030 -0.8 -1.5 phosphocarrier protein HPr compare
Atu0876 -0.8 -1.2 superoxide dismutase compare
Atu1466 -0.8 -1.7 hypothetical protein compare
Atu1705 -0.8 -3.3 SEC-independent protein translocase protein compare
Atu4616 -0.8 -1.0 dTDP-4-dehydrorhamnose reductase compare
Atu1529 -0.8 -4.0 nitrogen fixation protein FixH compare
Atu5125 -0.8 -2.3 GntR family transcriptional regulator compare
Atu0983 -0.8 -1.9 hypothetical protein compare
Atu1619 -0.8 -2.5 protein-export membrane protein SECG compare
Atu0419 -0.8 -1.4 two component sensor kinase compare
Atu1364 -0.8 -3.4 ATP-dependent Clp protease, ATP-binding subunit compare
Atu8056 -0.8 -1.1 hypothetical protein compare
Atu0886 -0.8 -0.8 hypothetical protein compare
Atu1076 -0.8 -2.1 colicin V production protein compare
Atu3698 -0.8 -2.7 thioredoxin compare
Atu1754 -0.8 -1.7 hypothetical protein compare
Atu1223 -0.7 -0.7 hypothetical protein compare
Atu3183 -0.7 -1.0 hypothetical protein compare
Atu1258 -0.7 -2.8 ATP-dependent Clp protease, proteolytic subunit compare
Atu0051 -0.7 -3.1 two component sensor kinase compare
Atu3248 -0.7 -3.2 cell division inhibitor compare
Atu2555 -0.7 -2.9 L-lysine 2,3-aminomutase compare
Atu2796 -0.7 -3.7 precorrin-4 C11-methyltransferase compare
Atu0361 -0.7 -2.0 transcriptional regulator compare
Atu2083 -0.7 -2.0 DNA repair protein RecN compare
Atu4514 -0.7 -1.6 RpiR family transcriptional regulator compare
Atu4610 -0.7 -4.7 sugar nucleotide epimerase/dehydratase compare
Atu3608 -0.7 -3.5 hypothetical protein compare
Atu1891 -0.7 -2.3 cobalamin biosynthesis protein compare
Atu1550 -0.7 -1.7 polypeptide deformylase compare
Atu8088 -0.7 -1.3 hypothetical protein compare
Atu2640 -0.7 -2.7 hypothetical protein compare
Atu3485 -0.7 -4.0 short chain dehydrogenase compare
Atu0895 -0.6 -1.7 ABC transporter, substrate binding protein compare
Atu3750 -0.6 -1.8 thiamine-phosphate pyrophosphorylase compare
Atu1629 -0.6 -0.9 transcriptional regulator, ArsR family compare
Atu0036 -0.6 -1.5 hypothetical protein compare
Atu2267 -0.6 -2.8 hypothetical protein compare
Atu2554 -0.6 -1.5 lysyl-tRNA synthetase compare
Atu3461 -0.6 -1.6 GntR family transcriptional regulator compare
Atu1774 -0.6 -3.5 ABC transporter, substrate binding protein (peptide) compare
Atu1468 -0.6 -3.2 hypothetical protein compare
Atu0943 -0.6 -0.9 hypothetical protein compare
Atu0973 -0.6 -3.2 cycH protein compare
Atu0920 -0.6 -2.1 hypothetical protein compare
Atu0544 -0.6 -1.5 hypothetical protein compare
Atu2481 -0.6 -3.8 lipase esterase compare
Atu2207 -0.6 -2.1 two component sensor kinase compare
Atu2832 -0.6 -2.1 tRNA modification GTPase compare
Atu2235 -0.6 -1.8 hypothetical protein compare
Atu1601 -0.6 -4.4 oxygen-independent coproporphyrinogen III oxidase compare
Atu3598 -0.6 -0.9 thiol:disulfide interchange protein compare
Atu0086 -0.6 -0.6 ribosome-binding factor A compare
Atu0039 -0.6 -0.9 imidazoleglycerol-phosphate synthase cyclase compare
Atu0924 -0.6 -1.3 hypothetical protein compare
Atu0050 -0.6 -2.1 two component response regulator compare
Atu1739 -0.6 -1.6 permease compare
Atu2217 -0.6 -2.4 hypothetical protein compare
Atu0344 -0.6 -1.9 hypothetical protein compare
Atu0101 -0.6 -1.9 cytochrome c compare
Atu1028 -0.6 -1.5 hypothetical protein compare
Atu0923 -0.6 -2.7 hypothetical protein compare
Atu4527 -0.6 -1.2 hypothetical protein compare
Atu2722 -0.6 -3.2 porin compare
Atu0269 -0.6 -1.8 exodeoxyribonuclease VII large subunit compare
Atu1902 -0.5 -2.4 transketolase compare
Atu0422 -0.5 -1.3 ABC transporter, membrane spanning protein compare
Atu3815 -0.5 -2.7 GntR family transcriptional regulator compare
Atu2238 -0.5 -3.3 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu2052 -0.5 -2.4 hypothetical protein compare
Atu2787 -0.5 -0.7 hypothetical protein compare
Atu2483 -0.5 -4.2 AcrB/AcrD/AcrF family protein compare
Atu2239 -0.5 -1.5 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu2482 -0.5 -3.5 HlyD family secretion protein compare
Atu4394 -0.5 -3.3 hypothetical protein compare
Atu2807 -0.5 -3.1 cob(I)alamin adenosyltransferase compare
Atu1513 -0.5 -2.4 ABC excinuclease subunit A compare
Atu1970 -0.5 -1.7 hypothetical protein compare
Atu1536 -0.5 -2.2 cytochrome C oxidase, FixO chain compare
Atu3337 -0.5 -3.2 LacI family transcriptional regulator compare
Atu0193 -0.5 -1.7 glutamine synthetase compare
Atu0119 -0.5 -0.7 hypothetical protein compare
Atu0085 -0.5 -2.0 tRNA pseudouridine 55 synthase compare
Atu4743 -0.5 -3.0 LacI family transcriptional regulator compare
Atu4061 -0.5 -1.2 exopolysaccharide production repressor protein compare
Atu3518 -0.5 -2.5 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu8189 -0.5 -1.5 hypothetical protein compare
Atu0602 -0.5 -2.8 glutamine synthetase compare
Atu0687 -0.5 -1.3 hypothetical protein compare
Atu1537 -0.5 -2.9 cytochrome-c oxidase, FixN chain compare
Atu2140 -0.5 -1.2 hypothetical protein compare
Atu2801 -0.5 -1.7 precorrin-2 C20 methyltransferase compare
Atu2192 -0.5 -0.8 hypothetical protein compare
Atu5075 -0.5 -2.7 GntR family transcriptional regulator compare
Atu1803 -0.5 -2.6 cold shock protein compare
Atu0565 -0.5 -1.3 hypothetical protein compare
Atu1534 -0.5 -2.4 cytochrome-c oxidase, FixP chain compare
Atu2201 -0.5 -0.8 hydrolase compare
Atu8099 -0.5 -1.8 hypothetical protein compare
Atu4106 -0.5 -2.3 hypothetical protein compare
Atu4589 -0.5 -1.8 transmembrane transport protein compare
Atu1469 -0.5 -1.1 hypothetical protein compare
Atu3264 -0.5 -2.3 IclR family transcriptional regulator compare
Atu1204 -0.5 -2.0 potassium uptake protein compare
Atu5047 -0.4 -1.8 hypothetical protein compare
Atu3249 -0.4 -2.4 septum formation inhibitor compare
Atu1530 -0.4 -3.1 nitrogen fixation protein FixG compare
Atu2824 -0.4 -1.8 hypothetical protein compare
Atu1503 -0.4 -0.7 hypothetical protein compare
Atu5496 -0.4 -2.7 TetR family transcriptional regulator compare
Atu2683 -0.4 -0.9 hypothetical protein compare
Atu1338 -0.4 -2.0 3-oxoacyl-(acyl carrier protein) reductase compare
Atu2656 -0.4 -2.9 hypothetical protein compare
Atu4641 -0.4 -1.9 LysR family transcriptional regulator compare
Atu2067 -0.4 -0.5 hypothetical protein compare
Atu1021 -0.4 -1.1 outer membrane protein compare
Atu4613 -0.4 -3.3 glycosyltransferase compare
Atu2281 -0.4 -2.5 ABC transporter, substrate binding protein (proline/glycine betaine) compare
Atu0796 -0.4 -2.4 putative peptidase compare
Atu0486 -0.4 -2.0 dihydroorotate dehydrogenase compare
Atu8052 -0.4 -0.9 hypothetical protein compare
Atu0388 -0.4 -3.4 two component sensor kinase compare
Atu2821 -0.4 -2.2 transcriptional regulator, GntR family compare
Atu2811 -0.4 -2.4 hypothetical protein compare
Atu2803 -0.4 -1.6 Cobalamin biosynthesis associated protein compare
Atu2772 -0.4 -2.0 Invasion protein A compare
Atu3467 -0.4 -1.1 hypothetical protein compare
Atu0659 -0.4 -1.7 NTP pyrophosphohydrolase, MutT family compare
Atu1307 -0.4 -1.7 dihydroorotase compare
Atu0893 -0.4 -1.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu3429 -0.4 -0.8 hypothetical protein compare
Atu2684 -0.4 -0.8 hypothetical protein compare
Atu3707 -0.4 -1.2 phosphoserine aminotransferase compare
Atu8082 -0.4 -1.0 hypothetical protein compare
Atu0927 -0.4 -2.1 LysE family transporter compare
Atu2798 -0.4 -1.1 precorrin-6y methyltransferase compare
Atu0298 -0.4 -2.1 orotidine 5 compare
Atu4618 -0.4 -3.0 dTDP-rhamnose-3,5-epimerase compare
Atu2795 -0.4 -2.4 cobalamin biosynthetic protein compare
Atu8169 -0.4 -1.4 hypothetical protein compare
Atu0237 -0.4 -1.9 hypothetical protein compare
Atu0482 -0.4 -2.3 polysaccharide deacetylase compare
Atu0257 -0.4 -2.6 hypothetical protein compare
Atu1793 -0.4 -2.3 phosphatidylcholine synthase compare
Atu2827 -0.4 -1.2 hypothetical protein compare
Atu8158 -0.4 -0.8 hypothetical protein compare
Atu2001 -0.4 -2.9 excinuclease ABC subunit B compare
Atu1602 -0.4 -1.4 transcriptional activator, Crp family compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_arabidopsis_leaf experiments

For lb_arabidopsis_leaf LB_arabidopsis_leaf across organisms