Experiment set13IT024 for Agrobacterium fabrum C58

Compare to:

LB_arabidopsis_leaf

200 most important genes:

  gene name fitness t score description  
Atu1570 -3.7 -1.7 hypothetical protein compare
Atu0769 -2.9 -1.9 protoheme IX farnesyltransferase compare
Atu0184 -2.7 -4.0 glucokinase compare
Atu0041 -2.5 -2.9 glutamine amidotransferase compare
Atu1446 -2.4 -2.7 two component response regulator compare
Atu4317 -2.3 -3.6 TetR family transcriptional regulator compare
Atu1810 -2.2 -1.3 hypothetical protein compare
Atu0723 -2.0 -1.4 FAD dependent oxidoreductase compare
Atu2439 -1.9 -1.9 hypothetical protein compare
Atu2584 -1.9 -6.3 hypothetical protein compare
Atu3763 -1.9 -1.3 hypothetical protein compare
Atu0894 -1.8 -2.4 ABC transporter, membrane spanning protein compare
Atu0141 -1.7 -2.0 cytochrome O ubiquinol oxidase subunit I compare
Atu0331 -1.7 -3.0 sigma-54 modulation protein compare
Atu4148 -1.6 -6.6 UDP-glucuronic acid epimerase compare
Atu4149 -1.6 -9.6 UDP-glucose 6-dehydrogenase compare
Atu2585 -1.6 -6.3 hypothetical protein compare
Atu3469 -1.6 -2.7 phosphoglyceromutase compare
Atu2592 -1.5 -6.5 hypothetical protein compare
Atu2583 -1.4 -8.5 glycosyltransferase compare
Atu0976 -1.3 -2.3 cycL protein compare
Atu2577 -1.3 -10.2 ABC transporter, nucleotide binding/ATPase protein compare
Atu3730 -1.3 -1.6 hypothetical protein compare
Atu3468 -1.3 -0.8 hypothetical protein compare
Atu0971 -1.3 -2.2 two component sensor kinase compare
Atu4166 -1.3 -2.3 UDP-glucose 4-epimerase compare
Atu0986 -1.3 -1.2 hypothetical protein compare
Atu2590 -1.2 -6.6 hypothetical protein compare
Atu0400 -1.2 -2.6 orotate phosphoribosyltransferase compare
Atu2591 -1.2 -6.2 glucosyltransferase compare
Atu0876 -1.2 -2.1 superoxide dismutase compare
Atu2073 -1.2 -2.8 membrane protein compare
Atu0966 -1.2 -2.7 hypothetical protein compare
Atu0050 -1.2 -3.9 two component response regulator compare
Atu1527 -1.2 -3.8 nitrogen fixation protein FixS compare
Atu5540 -1.1 -1.2 hypothetical protein compare
Atu2582 -1.1 -5.7 UDP-glucose/GDP-mannose dehydrogenase compare
Atu0188 -1.1 -2.7 ABC transporter, membrane spanning protein (peptide) compare
Atu0399 -1.1 -3.6 dihydroorotase compare
Atu1364 -1.1 -3.2 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1688 -1.0 -3.0 indole-3-glycerol-phosphate synthase compare
Atu0886 -1.0 -0.8 hypothetical protein compare
Atu2480 -1.0 -4.2 transcriptional regulator, LysR family compare
Atu2052 -1.0 -3.7 hypothetical protein compare
Atu1470 -1.0 -1.0 Camphor resistance protein compare
Atu1534 -1.0 -4.1 cytochrome-c oxidase, FixP chain compare
Atu0422 -1.0 -1.4 ABC transporter, membrane spanning protein compare
Atu0039 -1.0 -1.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu3183 -0.9 -1.1 hypothetical protein compare
Atu0893 -0.9 -2.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu1536 -0.9 -2.9 cytochrome C oxidase, FixO chain compare
Atu2270 -0.9 -1.3 ATP-dependent Clp protease, proteolytic subunit compare
Atu4613 -0.9 -6.3 glycosyltransferase compare
Atu0486 -0.9 -2.7 dihydroorotate dehydrogenase compare
Atu5501 -0.9 -2.2 hypothetical protein compare
Atu4187 -0.9 -1.1 tRNA-Met compare
Atu3008 -0.9 -0.9 hypothetical protein compare
Atu1902 -0.9 -4.1 transketolase compare
Atu5088 -0.9 -1.7 hypothetical protein compare
Atu0809 -0.9 -1.3 hypothetical protein compare
Atu2068 -0.9 -2.7 hypothetical protein compare
Atu2483 -0.9 -6.9 AcrB/AcrD/AcrF family protein compare
Atu0434 -0.9 -1.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0659 -0.9 -3.1 NTP pyrophosphohydrolase, MutT family compare
Atu1537 -0.9 -5.1 cytochrome-c oxidase, FixN chain compare
Atu0107 -0.9 -2.1 hypothetical protein compare
Atu8138 -0.9 -1.5 hypothetical protein compare
Atu0920 -0.9 -2.7 hypothetical protein compare
Atu2344 -0.8 -1.7 lactoylglutathione lyase compare
Atu8053 -0.8 -2.8 hypothetical protein compare
Atu2827 -0.8 -2.8 hypothetical protein compare
Atu4072 -0.8 -1.0 nodulation protein N compare
Atu4407 -0.8 -3.1 periplasmic nitrate reductase, NapD protein compare
Atu6036 -0.8 -0.7 entry-exclusion protein compare
Atu4618 -0.8 -5.1 dTDP-rhamnose-3,5-epimerase compare
Atu4144 -0.8 -1.0 hypothetical protein compare
Atu4093 -0.8 -2.4 hypothetical protein compare
Atu1705 -0.8 -2.2 SEC-independent protein translocase protein compare
Atu3733 -0.8 -2.0 hypothetical protein compare
Atu3162 -0.8 -4.8 LacI family transcriptional regulator compare
Atu1021 -0.8 -1.4 outer membrane protein compare
Atu0784 -0.8 -1.8 hypothetical protein compare
Atu2482 -0.8 -4.0 HlyD family secretion protein compare
Atu8041 -0.8 -1.9 hypothetical protein compare
Atu0189 -0.8 -1.8 ABC transporter, membrane spanning protein (peptide) compare
Atu1026 -0.8 -1.8 hypothetical protein compare
Atu4617 -0.8 -5.3 dTDP-D-glucose-4,6-dehydratase compare
Atu1163 -0.8 -1.0 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu4879 -0.7 -4.3 hypothetical protein compare
Atu1528 -0.7 -5.2 nitrogen fixation protein FixI compare
Atu2207 -0.7 -2.0 two component sensor kinase compare
Atu1573 -0.7 -0.7 hypothetical protein compare
Atu1074 -0.7 -4.5 NAD/NADP dependent oxidoreductase compare
Atu2728 -0.7 -1.7 beta (1-->2) glucan export ATP-binding protein compare
Atu4614 -0.7 -4.2 glycosyltransferase compare
Atu1530 -0.7 -4.5 nitrogen fixation protein FixG compare
Atu3014 -0.7 -1.2 hypothetical protein compare
Atu0718 -0.7 -1.3 hypothetical protein compare
Atu0824 -0.7 -0.9 hypothetical protein compare
Atu0488 -0.7 -2.1 hypothetical protein compare
Atu1503 -0.7 -0.9 hypothetical protein compare
Atu0339 -0.7 -1.8 hypothetical protein compare
Atu1602 -0.7 -3.7 transcriptional activator, Crp family compare
Atu2824 -0.7 -2.0 hypothetical protein compare
Atu4878 -0.7 -3.1 hypothetical protein compare
Atu1529 -0.7 -3.1 nitrogen fixation protein FixH compare
Atu2640 -0.7 -2.3 hypothetical protein compare
Atu1099 -0.7 -3.1 hypothetical protein compare
Atu1739 -0.7 -1.7 permease compare
Atu3023 -0.7 -4.2 sugar ABC transporter permease compare
Atu8087 -0.7 -0.6 putative peptidoglycan binding protein compare
Atu3026 -0.7 -3.5 short chain dehydrogenase compare
Atu1339 -0.7 -1.4 ribonuclease E compare
Atu3248 -0.7 -4.1 cell division inhibitor compare
Atu3353 -0.7 -4.3 mannose-1-phosphate guanylyltransferase compare
Atu5125 -0.7 -2.2 GntR family transcriptional regulator compare
Atu3461 -0.7 -1.5 GntR family transcriptional regulator compare
Atu0106 -0.7 -1.9 cold shock protein compare
Atu2481 -0.6 -3.7 lipase esterase compare
Atu2368 -0.6 -0.9 hypothetical protein compare
Atu0962 -0.6 -3.5 hypothetical protein compare
Atu0051 -0.6 -2.4 two component sensor kinase compare
Atu5106 -0.6 -1.4 DNA binding protein compare
Atu2662 -0.6 -0.7 acetyltransferase compare
Atu2555 -0.6 -1.8 L-lysine 2,3-aminomutase compare
Atu0298 -0.6 -2.8 orotidine 5 compare
Atu0086 -0.6 -0.6 ribosome-binding factor A compare
Atu4743 -0.6 -3.0 LacI family transcriptional regulator compare
Atu5517 -0.6 -1.5 hypothetical protein compare
Atu3144 -0.6 -3.0 GntR family transcriptional regulator compare
Atu1701 -0.6 -1.2 protein-L-isoaspartate O-methyltransferase compare
Atu4880 -0.6 -4.1 AraC family transcriptional regulator compare
Atu0508 -0.6 -2.3 PH Adaption potassium efflux system compare
Atu3337 -0.6 -3.4 LacI family transcriptional regulator compare
Atu4685 -0.6 -3.6 LacI family transcriptional regulator compare
Atu1052 -0.6 -1.8 hypothetical protein compare
Atu3022 -0.6 -3.6 sugar ABC transporter permease compare
Atu2217 -0.6 -2.5 hypothetical protein compare
Atu1677 -0.6 -2.2 queuine tRNA-ribosyltransferase compare
Atu8167 -0.6 -3.7 putative transmembrane protein compare
Atu1028 -0.6 -1.4 hypothetical protein compare
Atu3311 -0.6 -4.1 phosphomannose isomerase compare
Atu3021 -0.6 -3.3 sugar ABC transporter ATPase compare
Atu2237 -0.6 -2.3 cytochrome c1 compare
Atu2238 -0.6 -2.8 ubiquinol-cytochrome c reductase cytochrome b subunit compare
Atu1466 -0.6 -0.6 hypothetical protein compare
Atu3755 -0.6 -1.8 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2606 -0.6 -2.4 transcriptional regulator, GntR family compare
Atu1321 -0.6 -1.8 hypothetical protein compare
Atu1687 -0.6 -2.5 anthranilate phosphoribosyltransferase compare
Atu0677 -0.6 -0.9 hypothetical protein compare
Atu2163 -0.6 -0.9 hypothetical protein compare
Atu3429 -0.6 -0.9 hypothetical protein compare
Atu1853 -0.6 -1.7 hypothetical protein compare
Atu1646 -0.6 -2.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu2239 -0.6 -1.1 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu1774 -0.6 -3.3 ABC transporter, substrate binding protein (peptide) compare
Atu4615 -0.6 -3.7 glucose-1-phosphate thymidylyltransferase compare
Atu4610 -0.6 -3.5 sugar nucleotide epimerase/dehydratase compare
Atu2201 -0.6 -1.4 hydrolase compare
Atu0225 -0.6 -0.6 hypothetical protein compare
Atu0904 -0.6 -1.6 hypothetical protein compare
Atu3727 -0.6 -2.0 hypothetical protein compare
Atu0658 -0.6 -3.1 phosphate permease compare
Atu1475 -0.6 -1.4 hypothetical protein compare
Atu1031 -0.6 -1.4 hypothetical protein compare
Atu4373 -0.5 -3.1 LacI family transcriptional regulator compare
Atu1619 -0.5 -1.4 protein-export membrane protein SECG compare
Atu3249 -0.5 -3.3 septum formation inhibitor compare
Atu0742 -0.5 -3.2 hypothetical protein compare
Atu1679 -0.5 -1.4 peptidyl prolyl cis-trans isomerase compare
Atu2433 -0.5 -0.8 hypothetical protein compare
Atu0142 -0.5 -1.5 cytochrome o ubiquinol oxidase subunit II compare
Atu0499 -0.5 -2.9 hypothetical protein compare
Atu4882 -0.5 -1.3 hypothetical protein compare
Atu1714 -0.5 -0.9 exonuclease III compare
Atu3033 -0.5 -2.1 hypothetical protein compare
Atu4873 -0.5 -2.7 TetR family transcriptional regulator compare
Atu1467 -0.5 -1.5 hypothetical protein compare
Atu8118 -0.5 -1.8 putative universal stress protein compare
Atu3518 -0.5 -2.9 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase compare
Atu1307 -0.5 -1.6 dihydroorotase compare
Atu2722 -0.5 -3.3 porin compare
Atu0445 -0.5 -2.3 hypothetical protein compare
Atu0943 -0.5 -1.1 hypothetical protein compare
Atu1334 -0.5 -2.5 aspartate transaminase compare
Atu5075 -0.5 -2.1 GntR family transcriptional regulator compare
Atu8010 -0.5 -1.7 hypothetical protein compare
Atu2634 -0.5 -0.8 hypothetical protein compare
Atu0237 -0.5 -1.8 hypothetical protein compare
Atu4029 -0.5 -2.3 gluconolactonase compare
Atu3572 -0.5 -2.9 transcriptional regulator compare
Atu4641 -0.5 -1.9 LysR family transcriptional regulator compare
Atu1219 -0.5 -0.6 hypothetical protein compare
Atu1805 -0.5 -2.4 hypothetical protein compare
Atu0340 -0.5 -0.9 SAM dependent methyltransferase compare
Atu1372 -0.5 -2.1 hypothetical protein compare
Atu5475 -0.5 -1.1 hypothetical protein compare
Atu3485 -0.5 -2.9 short chain dehydrogenase compare
Atu5107 -0.5 -1.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_arabidopsis_leaf experiments

For lb_arabidopsis_leaf LB_arabidopsis_leaf across organisms