Experiment set13IT022 for Agrobacterium fabrum C58
LB_arabidopsis_leaf
Group: lb_arabidopsis_leafMedia: LB + LB_arabidopsis_leaf
Culturing: Agro_ML11, tube, Aerobic, at 28 (C), shaken=200 rpm
By: Mitchell Thompson on 4/1/22
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 1 genes in this experiment
For lb_arabidopsis_leaf LB_arabidopsis_leaf in Agrobacterium fabrum C58
For lb_arabidopsis_leaf LB_arabidopsis_leaf across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Terminal cytochrome C oxidases | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| arsenite to oxygen electron transfer | 2 | 1 | 1 |
| arsenite to oxygen electron transfer (via azurin) | 3 | 1 | 1 |
| aerobic respiration I (cytochrome c) | 4 | 3 | 1 |
| aerobic respiration II (cytochrome c) (yeast) | 4 | 2 | 1 |
| Fe(II) oxidation | 6 | 2 | 1 |