Experiment set13IT018 for Agrobacterium fabrum C58

Compare to:

LB

200 most important genes:

  gene name fitness t score description  
Atu5430 -2.8 -2.0 hypothetical protein compare
Atu0141 -2.5 -2.4 cytochrome O ubiquinol oxidase subunit I compare
Atu0331 -2.3 -2.5 sigma-54 modulation protein compare
Atu3763 -2.0 -1.4 hypothetical protein compare
Atu8056 -1.7 -1.9 hypothetical protein compare
Atu0912 -1.5 -1.3 Na+/H+ antiporter compare
Atu4896 -1.4 -2.4 acetyltransferase compare
Atu2439 -1.4 -1.6 hypothetical protein compare
Atu2125 -1.4 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu4882 -1.4 -2.7 hypothetical protein compare
Atu1077 -1.3 -2.6 DNA repair protein compare
Atu2207 -1.3 -2.0 two component sensor kinase compare
Atu2017 -1.3 -1.3 hypothetical protein compare
Atu0971 -1.2 -2.7 two component sensor kinase compare
Atu2554 -1.2 -2.2 lysyl-tRNA synthetase compare
Atu0184 -1.2 -2.1 glucokinase compare
Atu8032 -1.2 -3.0 hypothetical protein compare
Atu0784 -1.1 -2.9 hypothetical protein compare
Atu2824 -1.1 -3.9 hypothetical protein compare
Atu0030 -1.1 -1.9 phosphocarrier protein HPr compare
Atu2163 -1.1 -1.5 hypothetical protein compare
Atu0886 -1.0 -1.4 hypothetical protein compare
Atu0434 -1.0 -1.2 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu0115 -1.0 -1.1 hypothetical protein compare
Atu2793 -1.0 -3.1 cobyrinic acid a,c-diamide synthase compare
Atu1030 -1.0 -1.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu1714 -0.9 -1.6 exonuclease III compare
Atu3461 -0.9 -2.0 GntR family transcriptional regulator compare
Atu3011 -0.9 -1.9 ArsR family transcriptional regulator compare
Atu2633 -0.9 -2.0 RhtB family transporter compare
Atu0923 -0.9 -3.7 hypothetical protein compare
Atu8138 -0.9 -1.7 hypothetical protein compare
Atu2249 -0.9 -1.2 hypothetical protein compare
Atu4686 -0.9 -2.4 hypothetical protein compare
Atu3248 -0.9 -4.8 cell division inhibitor compare
Atu3730 -0.9 -1.4 hypothetical protein compare
Atu4317 -0.9 -2.0 TetR family transcriptional regulator compare
Atu1021 -0.9 -1.4 outer membrane protein compare
Atu2802 -0.9 -3.4 precorrin-8X methylmutase compare
Atu2684 -0.8 -1.1 hypothetical protein compare
Atu0036 -0.8 -1.8 hypothetical protein compare
Atu1364 -0.8 -3.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3183 -0.8 -0.9 hypothetical protein compare
Atu3012 -0.8 -1.3 hypothetical protein compare
Atu0399 -0.8 -3.6 dihydroorotase compare
Atu1254 -0.8 -1.3 transcriptional regulator, ArsR family compare
Atu2057 -0.8 -1.3 DNA helicase II compare
Atu3009 -0.8 -0.6 exopolysaccharide production protein compare
Atu3396 -0.8 -4.9 ABC transporter substrate-binding protein compare
Atu2555 -0.7 -2.6 L-lysine 2,3-aminomutase compare
Atu1449 -0.7 -2.3 potassium uptake protein compare
Atu1683 -0.7 -1.4 hypothetical protein compare
Atu0269 -0.7 -2.7 exodeoxyribonuclease VII large subunit compare
Atu1307 -0.7 -3.0 dihydroorotase compare
Atu2662 -0.7 -1.1 acetyltransferase compare
Atu1099 -0.7 -3.6 hypothetical protein compare
Atu2796 -0.7 -3.9 precorrin-4 C11-methyltransferase compare
Atu1103 -0.7 -1.5 rRNA-adenine N6,N6-dimethyltransferase compare
Atu2807 -0.7 -3.5 cob(I)alamin adenosyltransferase compare
Atu2052 -0.7 -2.8 hypothetical protein compare
Atu0031 -0.7 -1.0 PTS system, IIA component compare
Atu3727 -0.7 -2.2 hypothetical protein compare
Atu3013 -0.7 -1.9 hypothetical protein compare
Atu2034 -0.7 -3.0 transcriptional regulator, ArsR family compare
Atu0544 -0.7 -1.4 hypothetical protein compare
Atu2809 -0.7 -4.5 cobalamin biosynthesis protein compare
Atu1110 -0.7 -2.2 cytosol aminopeptidase compare
Atu0920 -0.7 -2.7 hypothetical protein compare
Atu0050 -0.7 -2.9 two component response regulator compare
Atu2692 -0.7 -1.6 intracellular septation protein compare
Atu3750 -0.7 -2.0 thiamine-phosphate pyrophosphorylase compare
Atu2801 -0.7 -2.7 precorrin-2 C20 methyltransferase compare
Atu2803 -0.7 -2.7 Cobalamin biosynthesis associated protein compare
Atu3028 -0.7 -3.7 hypothetical protein compare
Atu5057 -0.7 -1.8 hypothetical protein compare
Atu4099 -0.7 -3.1 hypothetical protein compare
Atu3739 -0.7 -1.4 phosphoglycerate kinase compare
Atu1518 -0.7 -2.8 transcriptional regulator, Fur family compare
Atu8082 -0.7 -1.5 hypothetical protein compare
Atu2124 -0.7 -2.6 transcriptional regulator, ArsR family compare
Atu0687 -0.7 -1.2 hypothetical protein compare
Atu3598 -0.7 -0.9 thiol:disulfide interchange protein compare
Atu2192 -0.7 -1.1 hypothetical protein compare
Atu1503 -0.6 -1.0 hypothetical protein compare
Atu0107 -0.6 -1.5 hypothetical protein compare
Atu4148 -0.6 -3.0 UDP-glucuronic acid epimerase compare
Atu1619 -0.6 -2.1 protein-export membrane protein SECG compare
Atu2810 -0.6 -4.1 cobalamin biosynthetic protein compare
Atu1475 -0.6 -1.2 hypothetical protein compare
Atu3755 -0.6 -2.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2437 -0.6 -2.7 hypothetical protein compare
Atu1891 -0.6 -2.1 cobalamin biosynthesis protein compare
Atu3395 -0.6 -3.5 iron (III ABC transporter permease ABC transporter permease compare
Atu3798 -0.6 -2.8 TetR family transcriptional regulator compare
Atu1204 -0.6 -2.8 potassium uptake protein compare
Atu1513 -0.6 -2.8 ABC excinuclease subunit A compare
Atu1760 -0.6 -0.9 hypothetical protein compare
Atu0677 -0.6 -1.6 hypothetical protein compare
Atu1705 -0.6 -2.4 SEC-independent protein translocase protein compare
Atu2800 -0.6 -1.1 precorrin-3B C17-methyltransferase compare
Atu4879 -0.6 -2.9 hypothetical protein compare
Atu1566 -0.6 -0.8 hypothetical protein compare
Atu2832 -0.6 -2.1 tRNA modification GTPase compare
Atu1739 -0.6 -1.6 permease compare
Atu4880 -0.6 -4.0 AraC family transcriptional regulator compare
Atu3160 -0.6 -1.6 hypothetical protein compare
Atu0585 -0.6 -1.3 hypothetical protein compare
Atu1219 -0.6 -0.8 hypothetical protein compare
Atu2804 -0.6 -3.8 cobaltochelatase subunit compare
Atu1076 -0.6 -1.6 colicin V production protein compare
Atu4889 -0.6 -2.5 hypothetical protein compare
Atu4072 -0.6 -0.7 nodulation protein N compare
Atu4677 -0.6 -0.8 hypothetical protein compare
Atu3249 -0.6 -3.1 septum formation inhibitor compare
Atu5471 -0.6 -1.7 hypothetical protein compare
Atu2728 -0.6 -1.5 beta (1-->2) glucan export ATP-binding protein compare
Atu4873 -0.6 -2.7 TetR family transcriptional regulator compare
Atu0659 -0.5 -2.8 NTP pyrophosphohydrolase, MutT family compare
Atu3754 -0.5 -2.9 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3467 -0.5 -1.3 hypothetical protein compare
Atu2795 -0.5 -2.7 cobalamin biosynthetic protein compare
Atu0051 -0.5 -2.3 two component sensor kinase compare
Atu4469 -0.5 -1.3 iron ABC transporter permease compare
Atu0565 -0.5 -2.1 hypothetical protein compare
Atu3838 -0.5 -2.4 hypothetical protein compare
Atu0153 -0.5 -2.4 transcriptional regulator, Fur family compare
Atu4876 -0.5 -3.7 oxidoreductase compare
Atu3018 -0.5 -1.6 hypothetical protein compare
Atu1679 -0.5 -1.3 peptidyl prolyl cis-trans isomerase compare
Atu1980 -0.5 -0.9 hypothetical protein compare
Atu1421 -0.5 -3.3 hypothetical protein compare
Atu8099 -0.5 -2.0 hypothetical protein compare
Atu1810 -0.5 -0.6 hypothetical protein compare
Atu0382 -0.5 -2.0 hypothetical protein compare
Atu1445 -0.5 -2.2 two component sensor kinase compare
Atu0938 -0.5 -1.6 transcriptional regulator, MerR family compare
Atu3246 -0.5 -2.4 amino acid ABC transporter substrate-binding protein compare
Atu8094 -0.5 -1.9 hypothetical protein compare
Atu0878 -0.5 -2.0 hypothetical protein compare
Atu3010 -0.5 -2.7 hypothetical protein compare
Atu2799 -0.5 -1.6 precorrin-6x reductase compare
Atu0499 -0.5 -2.9 hypothetical protein compare
Atu6189 -0.5 -1.2 protein secretion chaperone compare
Atu0039 -0.5 -1.1 imidazoleglycerol-phosphate synthase cyclase compare
Atu1803 -0.5 -2.5 cold shock protein compare
Atu5160 -0.5 -1.6 transcriptional regulator protein compare
Atu0040 -0.5 -0.5 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2798 -0.5 -2.0 precorrin-6y methyltransferase compare
Atu0894 -0.5 -1.1 ABC transporter, membrane spanning protein compare
Atu1031 -0.5 -1.7 hypothetical protein compare
Atu1542 -0.5 -2.5 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1484 -0.5 -1.6 transcriptional regulator compare
Atu3025 -0.5 -3.8 oligo alginate lyase compare
Atu0400 -0.5 -1.9 orotate phosphoribosyltransferase compare
Atu2044 -0.5 -1.9 HFLC protein compare
Atu0413 -0.5 -1.3 stress induced protein compare
Atu3023 -0.5 -2.7 sugar ABC transporter permease compare
Atu2640 -0.5 -1.9 hypothetical protein compare
Atu4616 -0.5 -0.8 dTDP-4-dehydrorhamnose reductase compare
Atu3394 -0.5 -2.0 iron ABC transporter ATPase compare
Atu1805 -0.5 -2.7 hypothetical protein compare
Atu1285 -0.5 -2.6 metal dependent hydrolase compare
Atu4541 -0.5 -2.1 carboxymuconolactone decarboxylase compare
Atu3022 -0.5 -2.7 sugar ABC transporter permease compare
Atu1258 -0.5 -2.4 ATP-dependent Clp protease, proteolytic subunit compare
Atu3999 -0.5 -1.3 dithiobiotin synthetase compare
Atu3030 -0.5 -2.2 hypothetical protein compare
Atu0777 -0.5 -0.5 hypothetical protein compare
Atu1847 -0.5 -1.1 hypothetical protein compare
Atu2399 -0.5 -2.5 hypothetical protein compare
Atu3545 -0.5 -2.2 hypothetical protein compare
Atu4872 -0.5 -2.8 LysR family transcriptional regulator compare
Atu3807 -0.5 -2.0 AsnC family transcriptional regulator compare
Atu3484 -0.5 -2.6 hypothetical protein compare
Atu2378 -0.5 -1.3 hypothetical protein compare
Atu1737 -0.5 -1.5 hypothetical protein compare
Atu4724 -0.5 -1.7 hypothetical protein compare
Atu6036 -0.5 -0.8 entry-exclusion protein compare
Atu4875 -0.5 -2.3 hypothetical protein compare
Atu1446 -0.5 -0.4 two component response regulator compare
Atu1325 -0.4 -1.7 acetyltransferase compare
Atu3027 -0.4 -2.7 dehydrogenase compare
Atu0038 -0.4 -2.1 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu2478 -0.4 -1.8 hypothetical protein compare
Atu0189 -0.4 -1.2 ABC transporter, membrane spanning protein (peptide) compare
Atu2585 -0.4 -2.1 hypothetical protein compare
Atu4618 -0.4 -2.8 dTDP-rhamnose-3,5-epimerase compare
Atu3759 -0.4 -0.8 hypothetical protein compare
Atu1759 -0.4 -2.9 L-serine dehydratase compare
Atu8020 -0.4 -1.6 hypothetical protein compare
Atu0185 -0.4 -1.3 methylglyoxal synthase compare
Atu0106 -0.4 -1.0 cold shock protein compare
Atu3162 -0.4 -2.8 LacI family transcriptional regulator compare
Atu3485 -0.4 -2.6 short chain dehydrogenase compare
Atu8093 -0.4 -2.2 hypothetical protein compare
Atu3705 -0.4 -1.8 hypothetical protein compare
Atu8191 -0.4 -0.9 hypothetical protein compare
Atu0684 -0.4 -1.9 hypothetical protein compare
Atu5026 -0.4 -1.7 hypothetical protein compare
Atu8035 -0.4 -1.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb experiments

For lb LB across organisms