Experiment set13IT017 for Agrobacterium fabrum C58

Compare to:

LB

200 most important genes:

  gene name fitness t score description  
Atu0141 -2.5 -2.4 cytochrome O ubiquinol oxidase subunit I compare
Atu4896 -2.5 -2.8 acetyltransferase compare
Atu4317 -2.3 -4.3 TetR family transcriptional regulator compare
Atu1359 -2.2 -1.7 dnaK deletion suppressor protein compare
Atu2439 -2.1 -2.2 hypothetical protein compare
Atu0184 -1.9 -3.7 glucokinase compare
Atu1446 -1.8 -1.6 two component response regulator compare
Atu2662 -1.7 -2.2 acetyltransferase compare
Atu0941 -1.5 -1.3 hypothetical protein compare
Atu4217 -1.5 -1.3 TetR family transcriptional regulator compare
Atu3730 -1.4 -2.1 hypothetical protein compare
Atu2163 -1.4 -1.8 hypothetical protein compare
Atu0876 -1.4 -2.1 superoxide dismutase compare
Atu2634 -1.3 -1.4 hypothetical protein compare
Atu4677 -1.3 -1.5 hypothetical protein compare
Atu0769 -1.3 -1.3 protoheme IX farnesyltransferase compare
Atu0331 -1.3 -3.2 sigma-54 modulation protein compare
Atu2207 -1.3 -1.9 two component sensor kinase compare
Atu2555 -1.3 -3.8 L-lysine 2,3-aminomutase compare
Atu3183 -1.2 -1.2 hypothetical protein compare
Atu2125 -1.2 -1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu2728 -1.2 -2.8 beta (1-->2) glucan export ATP-binding protein compare
Atu3712 -1.1 -1.3 hypothetical protein compare
Atu3469 -1.1 -2.3 phosphoglyceromutase compare
Atu3009 -1.1 -0.8 exopolysaccharide production protein compare
Atu2824 -1.1 -3.4 hypothetical protein compare
Atu0269 -1.0 -3.2 exodeoxyribonuclease VII large subunit compare
Atu5430 -1.0 -1.5 hypothetical protein compare
Atu2808 -1.0 -4.1 cobyric acid synthase compare
Atu1619 -1.0 -2.8 protein-export membrane protein SECG compare
Atu2805 -1.0 -3.3 cobalamin synthesis protein compare
Atu2807 -1.0 -5.1 cob(I)alamin adenosyltransferase compare
Atu1030 -1.0 -1.3 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2684 -1.0 -1.5 hypothetical protein compare
Atu4166 -1.0 -2.1 UDP-glucose 4-epimerase compare
Atu3755 -0.9 -2.7 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1447 -0.9 -1.8 two component sensor kinase compare
Atu2809 -0.9 -5.7 cobalamin biosynthesis protein compare
Atu0434 -0.9 -2.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2803 -0.9 -3.1 Cobalamin biosynthesis associated protein compare
Atu2633 -0.9 -2.0 RhtB family transporter compare
Atu2640 -0.9 -3.1 hypothetical protein compare
Atu1754 -0.9 -1.9 hypothetical protein compare
Atu8082 -0.9 -1.6 hypothetical protein compare
Atu2796 -0.9 -6.0 precorrin-4 C11-methyltransferase compare
Atu1028 -0.9 -2.2 hypothetical protein compare
Atu1204 -0.9 -4.4 potassium uptake protein compare
Atu3016 -0.9 -3.7 phosphoglyceromutase compare
Atu8032 -0.9 -1.5 hypothetical protein compare
Atu3017 -0.9 -1.2 phosphoglyceromutase compare
Atu8052 -0.9 -1.8 hypothetical protein compare
Atu1077 -0.9 -2.8 DNA repair protein compare
Atu0399 -0.9 -3.5 dihydroorotase compare
Atu0923 -0.8 -3.9 hypothetical protein compare
Atu4148 -0.8 -3.7 UDP-glucuronic acid epimerase compare
Atu3754 -0.8 -2.8 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0051 -0.8 -2.8 two component sensor kinase compare
Atu2124 -0.8 -3.6 transcriptional regulator, ArsR family compare
Atu0971 -0.8 -2.1 two component sensor kinase compare
Atu3396 -0.8 -6.4 ABC transporter substrate-binding protein compare
Atu1952 -0.8 -1.4 hypothetical protein compare
Atu3394 -0.8 -1.9 iron ABC transporter ATPase compare
Atu5540 -0.8 -1.1 hypothetical protein compare
Atu0784 -0.8 -1.4 hypothetical protein compare
Atu1542 -0.8 -2.6 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu0107 -0.8 -2.0 hypothetical protein compare
Atu3763 -0.8 -0.9 hypothetical protein compare
Atu8087 -0.8 -0.6 putative peptidoglycan binding protein compare
Atu1364 -0.8 -3.5 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3663 -0.8 -0.7 hypothetical protein compare
Atu4881 -0.7 -3.3 hypothetical protein compare
Atu3727 -0.7 -2.5 hypothetical protein compare
Atu3248 -0.7 -4.3 cell division inhibitor compare
Atu0050 -0.7 -3.0 two component response regulator compare
Atu2249 -0.7 -1.0 hypothetical protein compare
Atu3015 -0.7 -3.0 hypothetical protein compare
Atu3012 -0.7 -1.2 hypothetical protein compare
Atu1685 -0.7 -0.9 hypothetical protein compare
Atu1099 -0.7 -3.5 hypothetical protein compare
Atu2821 -0.7 -2.9 transcriptional regulator, GntR family compare
Atu3667 -0.7 -2.6 aspartate alpha-decarboxylase compare
Atu2433 -0.7 -1.0 hypothetical protein compare
Atu2804 -0.7 -4.9 cobaltochelatase subunit compare
Atu3014 -0.7 -1.4 hypothetical protein compare
Atu2381 -0.7 -2.2 hypothetical protein compare
Atu0130 -0.7 -2.9 cytidine deaminase compare
Atu1739 -0.7 -2.3 permease compare
Atu4724 -0.7 -1.3 hypothetical protein compare
Atu0188 -0.7 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu0953 -0.7 -0.7 hypothetical protein compare
Atu3395 -0.7 -3.6 iron (III ABC transporter permease ABC transporter permease compare
Atu4792 -0.7 -1.3 hypothetical protein compare
Atu0142 -0.7 -1.9 cytochrome o ubiquinol oxidase subunit II compare
Atu4610 -0.7 -4.7 sugar nucleotide epimerase/dehydratase compare
Atu0361 -0.7 -1.1 transcriptional regulator compare
Atu1219 -0.7 -0.8 hypothetical protein compare
Atu1163 -0.7 -1.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu1874 -0.6 -1.6 RecA protein compare
Atu8018 -0.6 -0.8 hypothetical protein compare
Atu0400 -0.6 -2.4 orotate phosphoribosyltransferase compare
Atu0947 -0.6 -2.2 transcriptional regulator, AsnC family compare
Atu2794 -0.6 -2.1 uroporphyrin-III C-methyltransferase compare
Atu1850 -0.6 -2.2 phosphoribosylformylglycinamidine synthetase II compare
Atu3034 -0.6 -1.6 ROK family transcriptional regulator compare
Atu2800 -0.6 -1.3 precorrin-3B C17-methyltransferase compare
Atu0894 -0.6 -1.3 ABC transporter, membrane spanning protein compare
Atu2793 -0.6 -2.7 cobyrinic acid a,c-diamide synthase compare
Atu2352 -0.6 -1.7 hypothetical protein compare
Atu2798 -0.6 -2.3 precorrin-6y methyltransferase compare
Atu1062 -0.6 -1.2 phosphatidylserine synthase compare
Atu1846 -0.6 -1.1 hypothetical protein compare
Atu3249 -0.6 -3.4 septum formation inhibitor compare
Atu2484 -0.6 -1.1 hypothetical protein compare
Atu2795 -0.6 -3.1 cobalamin biosynthetic protein compare
Atu2267 -0.6 -3.0 hypothetical protein compare
Atu2169 -0.6 -2.3 hypothetical protein compare
Atu0886 -0.6 -0.6 hypothetical protein compare
Atu1529 -0.6 -1.4 nitrogen fixation protein FixH compare
Atu2801 -0.6 -1.9 precorrin-2 C20 methyltransferase compare
Atu2067 -0.6 -0.6 hypothetical protein compare
Atu4407 -0.6 -1.8 periplasmic nitrate reductase, NapD protein compare
Atu3496 -0.6 -1.4 hypothetical protein compare
Atu3739 -0.6 -1.9 phosphoglycerate kinase compare
Atu4873 -0.6 -2.6 TetR family transcriptional regulator compare
Atu0544 -0.6 -0.9 hypothetical protein compare
Atu3517 -0.6 -1.9 acetyltransferase compare
Atu0189 -0.6 -1.1 ABC transporter, membrane spanning protein (peptide) compare
Atu3466 -0.6 -1.7 ArsR family transcriptional regulator compare
Atu3020 -0.6 -2.3 GntR family transcriptional regulator compare
Atu4874 -0.6 -3.8 hypothetical protein compare
Atu3692 -0.6 -3.3 sigma factor compare
Atu1449 -0.6 -2.4 potassium uptake protein compare
Atu2810 -0.6 -3.5 cobalamin biosynthetic protein compare
Atu1021 -0.6 -1.3 outer membrane protein compare
Atu4099 -0.6 -2.8 hypothetical protein compare
Atu4187 -0.6 -0.8 tRNA-Met compare
Atu2034 -0.6 -2.4 transcriptional regulator, ArsR family compare
Atu0566 -0.6 -1.1 hypothetical protein compare
Atu2592 -0.6 -2.6 hypothetical protein compare
Atu1774 -0.6 -3.5 ABC transporter, substrate binding protein (peptide) compare
Atu1705 -0.5 -2.2 SEC-independent protein translocase protein compare
Atu1468 -0.5 -3.2 hypothetical protein compare
Atu1678 -0.5 -2.5 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu1285 -0.5 -2.5 metal dependent hydrolase compare
Atu4876 -0.5 -3.7 oxidoreductase compare
Atu2532 -0.5 -1.6 transcriptional regulator, MarR family compare
Atu4878 -0.5 -2.2 hypothetical protein compare
Atu3750 -0.5 -1.5 thiamine-phosphate pyrophosphorylase compare
Atu0206 -0.5 -2.0 hypothetical protein compare
Atu2648 -0.5 -2.1 hypothetical protein compare
Atu4116 -0.5 -3.0 dipeptide ABC transporter ATPase compare
Atu4117 -0.5 -2.1 dipeptide ABC transporter ATPase compare
Atu4469 -0.5 -1.5 iron ABC transporter permease compare
Atu2585 -0.5 -2.9 hypothetical protein compare
Atu0674 -0.5 -2.1 hypothetical protein compare
Atu5468 -0.5 -1.6 hypothetical protein compare
Atu3023 -0.5 -3.1 sugar ABC transporter permease compare
Atu3920 -0.5 -1.2 hypothetical protein compare
Atu1891 -0.5 -1.5 cobalamin biosynthesis protein compare
Atu4472 -0.5 -1.9 hypothetical protein compare
Atu1327 -0.5 -1.6 NADH-ubiquinone oxidoreductase compare
Atu3018 -0.5 -1.0 hypothetical protein compare
Atu0298 -0.5 -2.0 orotidine 5 compare
Atu0809 -0.5 -0.8 hypothetical protein compare
Atu4449 -0.5 -2.2 sorbitol/mannitol ABC transporter permease compare
Atu1189 -0.5 -1.7 hypothetical protein compare
Atu4435 -0.5 -2.4 oligopeptide ABC transporter ATPase compare
Atu1844 -0.5 -1.1 Phosphoribosylformylglycinamidine synthetase compare
Atu4893 -0.5 -1.7 hypothetical protein compare
Atu3608 -0.5 -1.9 hypothetical protein compare
Atu0904 -0.5 -1.1 hypothetical protein compare
Atu5026 -0.5 -2.3 hypothetical protein compare
Atu3619 -0.5 -1.1 hypothetical protein compare
Atu3387 -0.5 -1.5 sigma factor compare
Atu4618 -0.5 -2.9 dTDP-rhamnose-3,5-epimerase compare
Atu0681 -0.5 -2.3 hypothetical protein compare
Atu2832 -0.5 -1.7 tRNA modification GTPase compare
Atu3246 -0.5 -2.3 amino acid ABC transporter substrate-binding protein compare
Atu0401 -0.5 -2.2 fructokinase compare
Atu4882 -0.5 -1.1 hypothetical protein compare
Atu2123 -0.5 -2.1 methylenetetrahydrofolate reductase compare
Atu2452 -0.5 -2.1 hypothetical protein compare
Atu6189 -0.5 -1.1 protein secretion chaperone compare
Atu1260 -0.5 -0.9 hypothetical protein compare
Atu2462 -0.5 -1.4 hypothetical protein compare
Atu3021 -0.5 -2.6 sugar ABC transporter ATPase compare
Atu2582 -0.5 -2.6 UDP-glucose/GDP-mannose dehydrogenase compare
Atu0093 -0.5 -2.0 Recombination protein compare
Atu2692 -0.5 -1.7 intracellular septation protein compare
Atu3028 -0.5 -2.5 hypothetical protein compare
Atu0777 -0.5 -0.5 hypothetical protein compare
Atu0658 -0.5 -2.7 phosphate permease compare
Atu1714 -0.5 -0.9 exonuclease III compare
Atu1076 -0.5 -1.2 colicin V production protein compare
Atu0225 -0.4 -0.5 hypothetical protein compare
Atu2052 -0.4 -1.9 hypothetical protein compare
Atu0601 -0.4 -2.3 oxidoreductase compare
Atu3461 -0.4 -0.8 GntR family transcriptional regulator compare
Atu2554 -0.4 -0.9 lysyl-tRNA synthetase compare
Atu4864 -0.4 -1.9 MarR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb experiments

For lb LB across organisms