Experiment set13IT017 for Agrobacterium fabrum C58

Compare to:

LB

200 most detrimental genes:

  gene name fitness t score description  
Atu4897 +1.2 1.6 hypothetical protein compare
Atu3468 +0.9 0.9 hypothetical protein compare
Atu8161 +0.8 0.8 hypothetical protein compare
Atu2472 +0.8 1.8 hypothetical protein compare
Atu8159 +0.7 1.3 hypothetical protein compare
Atu1653 +0.7 3.2 hypothetical protein compare
Atu0086 +0.7 0.9 ribosome-binding factor A compare
Atu4409 +0.7 3.2 periplasmic nitrate reductase small subunit compare
Atu8025 +0.6 1.1 hypothetical protein compare
Atu0885 +0.6 1.9 hypothetical protein compare
Atu1232 +0.6 1.5 hypothetical protein compare
Atu6165 +0.6 1.4 hypothetical protein compare
Atu4159 +0.6 1.9 AsnC family transcriptional regulator compare
Atu1701 +0.6 1.8 protein-L-isoaspartate O-methyltransferase compare
Atu5513 +0.6 1.4 cold shock protein compare
Atu8195 +0.6 1.3 hypothetical protein compare
Atu0562 +0.6 2.3 flagellar motor switch protein FliN compare
Atu8096 +0.6 1.3 hypothetical protein compare
Atu0572 +0.6 1.5 hypothetical protein compare
Atu0912 +0.6 1.0 Na+/H+ antiporter compare
Atu1176 +0.6 2.7 hypothetical protein compare
Atu3775 +0.6 1.5 hypothetical protein compare
Atu1858 +0.6 2.2 hypothetical protein compare
Atu2021 +0.6 2.1 transcriptional regulator, AraC family compare
Atu4643 +0.6 2.3 hypothetical protein compare
Atu2368 +0.5 1.0 hypothetical protein compare
Atu4234 +0.5 2.1 amino acid ABC transporter permease compare
Atu2193 +0.5 0.7 hypothetical protein compare
Atu6045 +0.5 1.5 replication protein C compare
Atu1634 +0.5 1.2 hypothetical protein compare
Atu8054 +0.5 0.6 hypothetical protein compare
Atu4223 +0.5 1.0 sarcosine oxidase delta subunit compare
Atu0236 +0.5 1.4 hypothetical protein compare
Atu3579 +0.5 1.4 lactoylglutathione lyase compare
Atu4405 +0.5 2.0 periplasmic nitrate reductase NapE compare
Atu3491 +0.5 1.7 hypothetical protein compare
Atu8151 +0.5 1.2 hypothetical protein compare
Atu0926 +0.5 2.4 hypothetical protein compare
Atu1845 +0.5 1.5 phosphoribosylformylglycinamidine synthase I compare
Atu5157 +0.5 2.1 hypothetical protein compare
Atu3886 +0.5 2.8 lysophospholipase compare
Atu2787 +0.5 0.6 hypothetical protein compare
Atu1249 +0.4 1.6 hypothetical protein compare
Atu1921 +0.4 2.6 hypothetical protein compare
Atu1882 +0.4 2.3 usg protein compare
Atu3071 +0.4 1.4 hypothetical protein compare
Atu1503 +0.4 0.8 hypothetical protein compare
Atu1485 +0.4 2.3 ECF family sigma factor compare
Atu4279 +0.4 2.2 LysR family transcriptional regulator compare
Atu0853 +0.4 2.2 hypothetical protein compare
Atu2282 +0.4 2.1 thymidine kinase compare
Atu0280 +0.4 0.7 hypothetical protein compare
Atu8156 +0.4 1.8 hypothetical protein compare
Atu8145 +0.4 1.6 hypothetical protein compare
Atu0718 +0.4 1.5 hypothetical protein compare
Atu1023 +0.4 1.0 hypothetical protein compare
Atu8012 +0.4 0.8 hypothetical protein compare
Atu2379 +0.4 2.6 phosphomannomutase compare
Atu4023 +0.4 2.0 ferrichrome ABC transporter substrate-binding protein compare
Atu8057 +0.4 2.1 hypothetical protein compare
Atu0504 +0.4 2.1 hypothetical protein compare
Atu5010 +0.4 1.7 hypothetical protein compare
Atu0731 +0.4 2.9 divalent cation transporter compare
Atu3106 +0.4 2.1 sugar ABC transporter substrate-binding protein compare
Atu4050 +0.4 1.0 UTP-glucose-1-phosphate uridylyltransferase compare
Atu1629 +0.4 0.7 transcriptional regulator, ArsR family compare
Atu2272 +0.4 1.6 hypothetical protein compare
Atu8029 +0.4 0.8 hypothetical protein compare
Atu8189 +0.4 2.0 hypothetical protein compare
Atu8024 +0.4 1.6 hypothetical protein compare
Atu4167 +0.4 2.0 hypothetical protein compare
Atu2603 +0.4 1.9 ABC transporter, membrane spanning protein (maltose) compare
Atu3334 +0.4 1.5 hypothetical protein compare
Atu0477 +0.4 1.0 hypothetical protein compare
Atu0641 +0.4 1.6 hypothetical protein compare
Atu3256 +0.4 1.9 zinc-binding dehydrogenase compare
Atu0555 +0.4 2.3 flagellar basal-body rod protein FlgB compare
Atu1113 +0.4 2.1 dehydrogenase compare
Atu0785 +0.4 2.0 ribosomal-protein (S5)-alanine N-acetyltransferase compare
Atu0041 +0.4 1.0 glutamine amidotransferase compare
Atu3618 +0.4 1.8 hypothetical protein compare
Atu1019 +0.4 0.6 hypothetical protein compare
Atu2677 +0.4 1.3 protein tyrosine phosphatase compare
Atu8203 +0.4 1.8 hypothetical protein compare
Atu0640 +0.4 1.4 hypothetical protein compare
Atu0931 +0.4 2.6 penicillin binding protein compare
Atu0537 +0.4 1.9 histidinol dehydrogenase compare
Atu1418 +0.4 1.7 methylenetetrahydrofolate reductase compare
Atu2040 +0.4 1.5 phosphoserine phosphatase compare
Atu0109 +0.4 1.9 transcriptional regulator, MarR family compare
Atu4270 +0.4 2.3 hypothetical protein compare
Atu2691 +0.4 2.1 GGDEF family protein compare
Atu5451 +0.4 0.5 hypothetical protein compare
Atu3668 +0.4 1.4 siderophore biosynthesis protein compare
Atu2762 +0.4 1.3 hypothetical protein compare
Atu1775 +0.3 0.9 polyketide biosynthesis associated protein compare
Atu1301 +0.3 1.0 hypothetical protein compare
Atu8126 +0.3 2.0 putative phage tail protein I compare
Atu1490 +0.3 1.0 arsenate reductase compare
Atu2496 +0.3 1.9 nitroreducatase compare
Atu1581 +0.3 0.8 hypothetical protein compare
Atu4616 +0.3 0.4 dTDP-4-dehydrorhamnose reductase compare
Atu1640 +0.3 1.7 hypothetical protein compare
Atu1191 +0.3 1.7 hypothetical protein compare
Atu2384 +0.3 1.6 transcriptional regulator, TetR family compare
Atu4854 +0.3 1.5 hypothetical protein compare
Atu3590 +0.3 2.0 transporter compare
Atu3575 +0.3 1.7 xylose ABC transporter permease compare
Atu4607 +0.3 2.1 sugar acetylase compare
Atu1098 +0.3 1.8 hypothetical protein compare
Atu1220 +0.3 1.1 methylated-DNA--protein-cysteine methyltransferase compare
Atu4385 +0.3 1.1 hypothetical protein compare
Atu3447 +0.3 1.1 hypothetical protein compare
Atu3425 +0.3 1.4 hypothetical protein compare
Atu2205 +0.3 1.1 transcriptional regulator, MarR family compare
Atu3632 +0.3 1.2 hypothetical protein compare
Atu0725 +0.3 1.5 hypothetical protein compare
Atu4819 +0.3 1.6 hypothetical protein compare
Atu1072 +0.3 1.2 hypothetical protein compare
Atu0908 +0.3 1.7 transcriptional regulator compare
Atu3428 +0.3 1.2 hypothetical protein compare
Atu0924 +0.3 1.2 hypothetical protein compare
Atu3416 +0.3 1.4 ABC transporter substrate binding protein compare
Atu1660 +0.3 1.5 hypothetical protein compare
Atu0488 +0.3 1.1 hypothetical protein compare
Atu4495 +0.3 1.8 hypothetical protein compare
Atu3073 +0.3 1.9 aspartate racemase compare
Atu0040 +0.3 0.6 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu4834 +0.3 2.4 6-phosphogluconate dehydrogenase compare
Atu0666 +0.3 1.3 glycolate oxidase subunit compare
Atu2274 +0.3 1.8 cation efflux system protein compare
Atu0755 +0.3 0.9 hypothetical protein compare
Atu0888 +0.3 0.9 transcriptional regulator, MerR family compare
Atu4605 +0.3 1.2 IS3 family transposase compare
Atu1568 +0.3 2.1 transcriptional regulator, TetR family compare
Atu1591 +0.3 1.3 hypothetical protein compare
Atu2157 +0.3 1.6 tyrosine/serine protein phosphatase compare
Atu2657 +0.3 1.0 hypothetical protein compare
Atu0124 +0.3 1.6 hypothetical protein compare
Atu0421 +0.3 0.5 ABC transporter, membrane spanning protein compare
Atu8019 +0.3 1.2 hypothetical protein compare
Atu1241 +0.3 0.9 hypothetical protein compare
Atu3168 +0.3 1.4 sorbitol/mannitol ABC transporter permease compare
Atu1185 +0.3 1.3 hypothetical protein compare
Atu0733 +0.3 1.9 enoyl-CoA hydratase/isomerase compare
Atu3539 +0.3 1.5 hypothetical protein compare
Atu0805 +0.3 1.1 hypothetical protein compare
Atu3532 +0.3 1.5 GntR family transcriptional regulator compare
Atu1501 +0.3 1.2 hypothetical protein compare
Atu1587 +0.3 1.7 hypothetical protein compare
Atu4292 +0.3 1.7 chloramphenicol resistance protein compare
Atu2002 +0.3 1.1 esterase/lipase compare
Atu3467 +0.3 0.5 hypothetical protein compare
Atu4342 +0.3 0.9 hypothetical protein compare
Atu1868 +0.3 1.3 tRNA/rRNA methyltransferase compare
Atu4231 +0.3 1.6 formyltetrahydrofolate deformylase compare
Atu0922 +0.3 1.3 hypothetical protein compare
Atu4236 +0.3 1.7 dehydrogenase compare
Atu0043 +0.3 0.8 imidazoleglycerol-phosphate dehydratase compare
Atu3349 +0.3 1.8 ABC transporter permease compare
Atu3522 +0.3 1.8 glucans biosynthesis protein compare
Atu1476 +0.3 1.6 esterase D compare
Atu1565 +0.3 1.3 serine acetyltransferase compare
Atu0105 +0.3 0.9 hypothetical protein compare
Atu1694 +0.3 0.9 hypothetical protein compare
Atu4220 +0.3 2.1 short-chain dehydrogenase compare
Atu2607 +0.3 2.0 glucosamine--fructose-6-phosphate aminotransferase compare
Atu1410 +0.3 1.3 ABC transporter, nucleotide binding/ATPase protein compare
Atu0437 +0.3 2.0 hypothetical protein compare
Atu0520 +0.3 1.2 chemotaxis receiver protein compare
Atu3586 +0.3 1.9 propionyl-CoA carboxylase compare
Atu2236 +0.3 1.2 adenine phosphoribosyltransferase compare
Atu2234 +0.3 0.8 hypothetical protein compare
Atu3180 +0.3 1.5 ABC transporter permease compare
Atu3193 +0.3 1.2 MarR family transcriptional regulator compare
Atu1042 +0.3 1.4 hypothetical protein compare
Atu5437 +0.3 0.9 hypothetical protein compare
Atu3267 +0.3 0.6 dipeptide ABC transporter permease compare
Atu3388 +0.3 1.1 iron ABC transporter ATPase compare
Atu4811 +0.3 1.7 UDP-phosphate alpha N-acetylglucosaminyltransferase compare
Atu0081 +0.3 1.8 ribosomal RNA small subunit methyltransferase compare
Atu2286 +0.3 0.4 hypothetical protein compare
Atu0495 +0.3 1.4 hypothetical protein compare
Atu3423 +0.3 0.7 hypothetical protein compare
Atu1888 +0.3 2.0 two component sensor kinase compare
Atu2324 +0.3 1.2 ureidoglycolate hydrolase compare
Atu4759 +0.3 1.6 threonine dehydratase compare
Atu8179 +0.3 1.5 hypothetical protein compare
Atu1912 +0.3 1.9 methyl-accepting chemotaxis protein compare
Atu1899 +0.3 1.6 ABC transporter, substrate binding protein (ribose) compare
Atu3130 +0.3 1.2 sugar ABC transporter substrate-binding protein compare
Atu4120 +0.3 1.7 mandelate racemase compare
Atu5446 +0.3 2.1 cultivar specificity protein W78 compare
Atu1397 +0.3 1.6 ABC transporter, membrane spanning protein (amino acid) compare
Atu6125 +0.3 1.5 conjugative transfer protein, Dtr system compare
Atu3078 +0.3 1.5 LysR family transcriptional regulator compare
Atu4779 +0.3 0.9 hypothetical protein compare
Atu2376 +0.3 0.5 hypothetical protein compare
Atu0961 +0.3 1.2 hypothetical protein compare
Atu1212 +0.3 1.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb experiments

For lb LB across organisms