Experiment set12IT089 for Agrobacterium fabrum C58

Compare to:

LB_Ntabacum_leaf

200 most important genes:

  gene name fitness t score description  
Atu0030 -3.5 -2.7 phosphocarrier protein HPr compare
Atu1030 -2.4 -3.2 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0421 -2.3 -2.5 ABC transporter, membrane spanning protein compare
Atu0977 -2.2 -6.7 serine protease DO-like protease compare
Atu0399 -2.2 -6.6 dihydroorotase compare
Atu2125 -1.8 -2.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu0486 -1.8 -6.0 dihydroorotate dehydrogenase compare
Atu4317 -1.6 -3.0 TetR family transcriptional regulator compare
Atu3763 -1.6 -1.6 hypothetical protein compare
Atu0659 -1.6 -6.0 NTP pyrophosphohydrolase, MutT family compare
Atu0163 -1.4 -5.7 tonB protein compare
Atu1380 -1.4 -5.7 zinc metallopeptidase compare
Atu0971 -1.3 -3.2 two component sensor kinase compare
Atu1447 -1.3 -2.7 two component sensor kinase compare
Atu4897 -1.3 -1.2 hypothetical protein compare
Atu0298 -1.2 -5.7 orotidine 5 compare
Atu0161 -1.2 -7.6 biopolymer transport protein compare
Atu0162 -1.2 -5.0 biopolymer transport protein compare
Atu0422 -1.1 -1.7 ABC transporter, membrane spanning protein compare
Atu3469 -1.1 -2.0 phosphoglyceromutase compare
Atu0026 -1.1 -1.2 hypothetical protein compare
Atu2640 -1.1 -3.3 hypothetical protein compare
Atu3121 -1.1 -1.6 cold shock protein compare
Atu0876 -1.0 -1.7 superoxide dismutase compare
Atu5115 -1.0 -1.8 hypothetical protein compare
Atu2554 -1.0 -1.7 lysyl-tRNA synthetase compare
Atu1163 -0.9 -1.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0400 -0.9 -2.1 orotate phosphoribosyltransferase compare
Atu0086 -0.9 -1.3 ribosome-binding factor A compare
Atu2207 -0.9 -2.4 two component sensor kinase compare
Atu3481 -0.9 -4.0 enoyl-CoA hydratase compare
Atu3732 -0.9 -5.4 hemolysin compare
Atu2286 -0.9 -1.7 hypothetical protein compare
Atu2800 -0.9 -1.9 precorrin-3B C17-methyltransferase compare
Atu0941 -0.9 -1.0 hypothetical protein compare
Atu0602 -0.8 -5.2 glutamine synthetase compare
Atu0846 -0.8 -2.5 transcriptional regulator, MarR family compare
Atu1308 -0.8 -3.3 aspartate carbamoyl transferase catalytic subunit compare
Atu2193 -0.8 -0.9 hypothetical protein compare
Atu2368 -0.8 -1.3 hypothetical protein compare
Atu3479 -0.8 -5.4 3-methylcrotonyl-CoA carboxylase subunit alpha compare
Atu0036 -0.8 -2.0 hypothetical protein compare
Atu1803 -0.8 -4.1 cold shock protein compare
Atu0357 -0.8 -4.0 phosphate starvation inducible protein compare
Atu4068 -0.7 -1.5 sarcosine oxidase delta subunit compare
Atu3480 -0.7 -3.3 hydroxymethylglutaryl-CoA lyase compare
Atu3910 -0.7 -3.4 LamB/YcsF family protein compare
Atu0025 -0.7 -2.5 hypothetical protein compare
Atu4616 -0.7 -1.4 dTDP-4-dehydrorhamnose reductase compare
Atu1739 -0.7 -2.2 permease compare
Atu0533 -0.7 -2.3 putative inhibitor of septum formation compare
Atu0544 -0.7 -1.8 hypothetical protein compare
Atu0070 -0.7 -3.3 ribonucleoside-diphosphate reductase 2 alpha chain compare
Atu2127 -0.7 -3.9 L-carnitine dehydratase compare
Atu0769 -0.7 -1.2 protoheme IX farnesyltransferase compare
Atu0188 -0.7 -2.0 ABC transporter, membrane spanning protein (peptide) compare
Atu0141 -0.7 -0.7 cytochrome O ubiquinol oxidase subunit I compare
Atu1446 -0.7 -1.3 two component response regulator compare
Atu3579 -0.7 -1.9 lactoylglutathione lyase compare
Atu2293 -0.7 -1.6 hypothetical protein compare
Atu0598 -0.7 -4.4 phosphogluconate dehydratase compare
Atu0031 -0.7 -1.0 PTS system, IIA component compare
Atu5146 -0.7 -1.2 hypothetical protein compare
Atu0401 -0.7 -2.7 fructokinase compare
Atu4869 -0.7 -1.9 hypothetical protein compare
Atu1466 -0.7 -1.4 hypothetical protein compare
Atu1606 -0.7 -3.5 methionine aminopeptidase compare
Atu3754 -0.6 -4.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu0331 -0.6 -2.0 sigma-54 modulation protein compare
Atu2803 -0.6 -2.4 Cobalamin biosynthesis associated protein compare
Atu3690 -0.6 -3.5 iron (III ABC transporter permease dicitrate ABC transporter permease compare
Atu5540 -0.6 -0.9 hypothetical protein compare
Atu3689 -0.6 -3.5 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu0346 -0.6 -1.7 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0784 -0.6 -1.8 hypothetical protein compare
Atu2827 -0.6 -1.4 hypothetical protein compare
Atu3474 -0.6 -4.2 acyl-CoA dehydrogenase compare
Atu4040 -0.6 -2.5 hypothetical protein compare
Atu4173 -0.6 -1.5 phosphoenolpyruvate-protein phosphotransferase compare
Atu2801 -0.6 -1.8 precorrin-2 C20 methyltransferase compare
Atu0322 -0.6 -3.7 enoyl CoA hydratase compare
Atu2052 -0.6 -2.8 hypothetical protein compare
Atu0601 -0.6 -3.5 oxidoreductase compare
Atu0658 -0.6 -3.8 phosphate permease compare
Atu4072 -0.6 -1.0 nodulation protein N compare
Atu3443 -0.6 -1.7 hypothetical protein compare
Atu1019 -0.6 -2.1 hypothetical protein compare
Atu0947 -0.6 -2.9 transcriptional regulator, AsnC family compare
Atu2650 -0.6 -3.9 glycerol-3-phosphate dehydrogenase compare
Atu0062 -0.6 -3.2 transcriptional regulator, ROK family compare
Atu8087 -0.6 -0.7 putative peptidoglycan binding protein compare
Atu5057 -0.6 -1.8 hypothetical protein compare
Atu2439 -0.6 -0.9 hypothetical protein compare
Atu0189 -0.6 -1.8 ABC transporter, membrane spanning protein (peptide) compare
Atu3777 -0.6 -3.4 hypothetical protein compare
Atu1484 -0.6 -1.6 transcriptional regulator compare
Atu1307 -0.6 -2.6 dihydroorotase compare
Atu6036 -0.6 -1.0 entry-exclusion protein compare
Atu8151 -0.6 -1.5 hypothetical protein compare
Atu0029 -0.6 -2.2 S-adenosylhomocysteine hydrolase compare
Atu4418 -0.6 -2.6 glutaryl-CoA dehydrogenase compare
Atu0039 -0.6 -1.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu0904 -0.6 -1.4 hypothetical protein compare
Atu1620 -0.6 -3.8 triosephosphate isomerase compare
Atu0723 -0.5 -1.0 FAD dependent oxidoreductase compare
Atu3739 -0.5 -1.6 phosphoglycerate kinase compare
Atu0149 -0.5 -1.7 enoyl-(acyl-carrier-protein) reductase compare
Atu4099 -0.5 -3.4 hypothetical protein compare
Atu0071 -0.5 -2.8 ribonucleoside-diphosphate reductase 2 beta chain compare
Atu2633 -0.5 -1.4 RhtB family transporter compare
Atu1364 -0.5 -2.8 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1874 -0.5 -1.4 RecA protein compare
Atu0011 -0.5 -1.9 transcriptional regulator compare
Atu3740 -0.5 -3.3 fructose bisphosphate aldolase compare
Atu0236 -0.5 -1.3 hypothetical protein compare
Atu1359 -0.5 -0.7 dnaK deletion suppressor protein compare
Atu3473 -0.5 -3.1 2-oxoisovalerate dehydrogenase subunit alpha compare
Atu2237 -0.5 -2.6 cytochrome c1 compare
Atu1752 -0.5 -1.6 hypothetical protein compare
Atu4773 -0.5 -0.6 two component response regulator compare
Atu0946 -0.5 -2.5 dehydrogenase compare
Atu2662 -0.5 -0.7 acetyltransferase compare
Atu1229 -0.5 -1.4 hypothetical protein compare
Atu0354 -0.5 -0.9 ferric uptake regulator compare
Atu4419 -0.5 -2.9 LysR family transcriptional regulator compare
Atu1007 -0.5 -1.6 hypothetical protein compare
Atu1607 -0.5 -2.1 DNA repair protein compare
Atu2045 -0.5 -2.3 HFLK protein compare
Atu3475 -0.5 -2.9 acetyl-CoA C-acetyltransferase compare
Atu1864 -0.5 -2.5 putative homoserine/homoserine lactone efflux protein compare
Atu2824 -0.5 -1.5 hypothetical protein compare
Atu0499 -0.5 -2.6 hypothetical protein compare
Atu1001 -0.5 -2.7 hypothetical protein compare
Atu4514 -0.5 -1.9 RpiR family transcriptional regulator compare
Atu2491 -0.5 -1.2 hypothetical protein compare
Atu0107 -0.5 -0.8 hypothetical protein compare
Atu0498 -0.5 -2.9 hypothetical protein compare
Atu4217 -0.5 -0.6 TetR family transcriptional regulator compare
Atu2239 -0.5 -1.8 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3478 -0.5 -2.7 3-methylcrotonoyl-CoA carboxylase beta subunit compare
Atu0698 -0.4 -2.0 hypothetical protein compare
Atu4153 -0.4 -3.0 aldehyde dehydrogenase compare
Atu0986 -0.4 -0.7 hypothetical protein compare
Atu1904 -0.4 -1.4 transcriptional regulator compare
Atu3755 -0.4 -2.1 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu0565 -0.4 -1.2 hypothetical protein compare
Atu0507 -0.4 -2.7 potassium efflux system protein compare
Atu4213 -0.4 -2.0 hypothetical protein compare
Atu1258 -0.4 -1.9 ATP-dependent Clp protease, proteolytic subunit compare
Atu2680 -0.4 -1.8 ABC transporter, nucleotide binding/ATPase protein compare
Atu1062 -0.4 -1.0 phosphatidylserine synthase compare
Atu0124 -0.4 -1.5 hypothetical protein compare
Atu1445 -0.4 -1.6 two component sensor kinase compare
Atu3293 -0.4 -2.7 D-amino acid dehydrogenase small subunit compare
Atu1853 -0.4 -2.0 hypothetical protein compare
Atu0185 -0.4 -2.1 methylglyoxal synthase compare
Atu0269 -0.4 -2.0 exodeoxyribonuclease VII large subunit compare
Atu2797 -0.4 -1.9 cobalamin biosynthesis protein compare
Atu1076 -0.4 -1.4 colicin V production protein compare
Atu2728 -0.4 -1.2 beta (1-->2) glucan export ATP-binding protein compare
Atu3331 -0.4 -2.0 hypothetical protein compare
Atu0388 -0.4 -3.2 two component sensor kinase compare
Atu2267 -0.4 -2.1 hypothetical protein compare
Atu0674 -0.4 -1.6 hypothetical protein compare
Atu1580 -0.4 -3.0 ABC transporter, nucleotide binding/ATPase protein (amino acid) compare
Atu4541 -0.4 -1.6 carboxymuconolactone decarboxylase compare
Atu1588 -0.4 -2.6 homoserine dehydrogenase compare
Atu0361 -0.4 -1.0 transcriptional regulator compare
Atu1387 -0.4 -1.0 transcriptional regulator, GntR family compare
Atu5160 -0.4 -0.9 transcriptional regulator protein compare
Atu4143 -0.4 -1.7 hypothetical protein compare
Atu0237 -0.4 -1.4 hypothetical protein compare
Atu4171 -0.4 -2.1 cold-shock dead-box protein A compare
Atu1902 -0.4 -2.1 transketolase compare
Atu1838 -0.4 -1.4 ABC transporter, substrate binding protein (amino acid) compare
Atu3334 -0.4 -2.1 hypothetical protein compare
Atu5064 -0.4 -2.1 MarR family transcriptional regulator compare
Atu2809 -0.4 -2.7 cobalamin biosynthesis protein compare
Atu2026 -0.4 -1.3 exodeoxyribonuclease V compare
Atu0535 -0.4 -1.7 hypothetical protein compare
Atu3963 -0.4 -2.1 GntR family transcriptional regulator compare
Atu2747 -0.4 -2.4 hypothetical protein compare
Atu4446 -0.4 -3.0 hypothetical protein compare
Atu1891 -0.4 -0.8 cobalamin biosynthesis protein compare
Atu2799 -0.4 -1.8 precorrin-6x reductase compare
Atu3472 -0.4 -1.9 2-oxoisovalerate dehydrogenase subunit beta compare
Atu4859 -0.4 -2.5 hypothetical protein compare
Atu3582 -0.4 -2.1 hypothetical protein compare
Atu3708 -0.4 -2.5 outer surface protein compare
Atu0503 -0.4 -3.1 enoyl-CoA hydratase compare
Atu0999 -0.4 -1.6 magnesium transport protein compare
Atu3775 -0.4 -1.0 hypothetical protein compare
Atu2608 -0.4 -2.2 N-acetylglucosamine-6-phosphate deacetylase compare
Atu3477 -0.4 -2.9 acyl-CoA dehydrogenase compare
Atu3471 -0.4 -2.6 branched-chain alpha-keto acid dehydrogenase subunit E2 compare
Atu4472 -0.4 -2.3 hypothetical protein compare
Atu2184 -0.4 -2.2 transcriptional regulator, AsnC family compare
Atu2113 -0.4 -1.2 N-acetylmuramoyl-L-alanine amidase compare
Atu4364 -0.4 -1.9 LacI family transcriptional regulator compare
Atu2692 -0.4 -1.0 intracellular septation protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_ntabacum_leaf experiments

For lb_ntabacum_leaf LB_Ntabacum_leaf across organisms