Experiment set12IT073 for Agrobacterium fabrum C58
Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
Group: in plantaMedia: + Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
Culturing: Agro_ML11
By: Mitchell Thompson on 4/1/22
Specific Phenotypes
For 1 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| D-Galacturonate and D-Glucuronate Utilization | 1 |
| D-galactarate, D-glucarate and D-glycerate catabolism | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| D-glucarate degradation II | 3 | 3 | 1 |
| D-galactarate degradation II | 3 | 3 | 1 |
| D-galacturonate degradation II | 5 | 5 | 1 |
| D-glucuronate degradation II | 5 | 5 | 1 |
| superpathway of microbial D-galacturonate and D-glucuronate degradation | 31 | 22 | 1 |