Experiment set12IT059 for Pseudomonas putida KT2440

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Phenylacetic acid carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_3284 -7.8 -5.4 enoyl-CoA hydratase-isomerase conserved
PP_3282 -7.6 -5.3 3-hydroxyadipyl-CoA dehydrogenase conserved
PP_3285 -7.4 -5.1 detoxifying thioesterase of the phenylacetate degradation pathway compare
PP_3276 -7.3 -7.1 ring 1,2-phenylacetyl-CoA epoxidase beta subunit conserved
PP_3279 -7.2 -9.9 phenylacetate-CoA ligase conserved
PP_3272 -6.5 -16.2 acetate permease compare
PP_3283 -6.4 -8.6 1,2-epoxyphenylacetyl-CoA isomerase conserved
PP_3280 -6.4 -6.5 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase conserved
PP_3270 -6.2 -14.4 oxepin-CoA hydrolase/3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase conserved
PP_3277 -6.1 -7.1 ring 1,2-phenylacetyl-CoA epoxidase regulatory subunit compare
PP_3274 -6.0 -11.3 ring 1,2-phenylacetyl-CoA epoxidase, reductase subunit conserved
PP_3278 -5.8 -8.7 ring 1,2-phenylacetyl-CoA epoxidase alpha subunit conserved
PP_3273 -3.8 -6.9 conserved protein of unknown function compare
PP_3493 -3.8 -7.8 Transcriptional regulator, LysR family compare
PP_3494 -3.2 -9.6 conserved exported protein of unknown function compare
PP_3281 -3.2 -5.5 hydroxyphenylacetyl-CoA thioesterase conserved
PP_0997 -1.2 -6.0 Sigma-54 dependent transcriptional regulator/sensory box protein compare
PP_0179 -1.2 -6.9 putative efflux transporter compare
PP_0988 -1.2 -7.8 glycine dehydrogenase compare
PP_0176 -1.1 -7.0 putative efflux transporter compare
PP_0178 -1.1 -5.8 putative efflux pump compare
PP_4172 +1.4 7.9 conserved exported protein of unknown function compare


Specific phenotypes for carbon source Phenylacetic acid across organisms