Experiment set12IT050 for Pseudomonas putida KT2440

Compare to:

Delta-Decalactone carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_2436 -5.5 -9.1 Transcriptional regulator, LysR family compare
PP_3925 -4.3 -13.9 conserved protein of unknown function compare
PP_0767 -3.9 -10.1 Transcriptional regulator, LuxR family compare
PP_3923 -3.7 -6.9 Phosphoglycerate mutase compare
PP_4948 -3.0 -10.2 Acyl-CoA dehydrogenase family protein compare
PP_0763 -3.0 -11.4 Medium-chain-fatty-acid CoA ligase compare
PP_2304 -2.7 -7.3 putative Peptidyl-prolyl cis-trans isomerase D compare
PP_5109 -2.6 -7.2 membrane component of the ABC transporter FtsEX involved in cellular division compare
PP_2680 -2.5 -5.7 aldehyde dehydrogenase compare
PP_2019 -2.3 -12.6 adhesin-associated MmpL efflux pump (from data) compare
PP_0997 -2.2 -6.2 Sigma-54 dependent transcriptional regulator/sensory box protein compare
PP_0988 -2.1 -8.1 glycine dehydrogenase compare
PP_5057 -2.1 -5.2 Peptidase, M23/M37 family compare
PP_0766 -2.1 -11.3 adhesin-associated sorting protein (DUF1329) (from data) compare
PP_4164 -1.9 -5.8 Alpha/beta hydrolase compare
PP_0413 -1.9 -9.3 Polyamine ABC transporter, permease protein compare
PP_3300 -1.9 -10.5 Transcriptional regulator, tetR family compare
PP_4550 -1.7 -8.2 long-chain-fatty-acid/CoA ligase compare
PP_1427 -1.6 -6.2 RNA polymerase sigma E factor compare
PP_0370 -1.6 -10.0 Acyl-CoA dehydrogenase family protein compare
PP_4798 -1.4 -5.0 putative Membrane-bound lytic murein transglycosylase compare
PP_0248 -1.4 -7.9 Probable alpha-L-glutamate ligase compare
PP_0428 -1.3 -5.3 aminoacyl-adenylate hydrolase/purine nucleoside phosphoramidase compare
PP_0680 -1.3 -7.5 ATP-dependent protease-like protein compare
PP_0765 -1.3 -10.2 putative adhesin (DUF1302) (from data) compare
PP_1737 -1.1 -7.0 conserved protein of unknown function compare
PP_1816 +1.0 6.9 Alcohol dehydrogenase, zinc-containing compare
PP_1080 +1.1 7.0 putative oxidoreductase molybdopterin-binding compare
PP_4149 +1.1 7.1 putative inner membrane ABC transporter permease protein compare
PP_5003 +1.4 9.4 poly(3-hydroxyalkanoate) polymerase 1 compare
PP_0672 +1.4 9.9 Sensory box protein compare
PP_4147 +1.4 9.8 microcin C transporter - periplasmic binding protein compare
PP_5745 +1.5 9.0 paraquat-inducible protein A compare
PP_0599 +1.5 11.4 paraquat-inducible protein B compare
PP_1968 +1.5 7.7 TetR family transcriptional regulator compare
PP_2082 +1.6 10.4 phosphoenolpyruvate synthetase compare
PP_0598 +1.6 9.0 paraquat-inducible protein A compare
PP_1875 +1.6 10.0 Sensor histidine kinase/response regulator compare
PP_1238 +1.6 5.7 putative Lipoprotein compare
PP_4762 +1.8 8.4 Acyl-CoA thioesterase II compare
PP_1761 +2.2 16.6 diguanylate cyclase with phosphodiesterase domain compare
PP_2666 +3.1 10.8 conserved exported protein of unknown function compare
PP_2683 +3.5 8.1 putative sensory box histidine kinase/response regulator compare
PP_2662 +3.5 25.3 conserved exported protein of unknown function compare
PP_2664 +4.0 30.5 putative hybrid sensor and regulator, histidine kinase compare
PP_2663 +4.2 28.6 conserved protein of unknown function compare


Specific phenotypes for carbon source Delta-Decalactone across organisms