Experiment set12IT034 for Pseudomonas putida KT2440

Sodium propionate carbon source

Group: carbon source
Media: MOPS minimal media_noCarbon + Sodium propionate (10 mM) + Dimethyl Sulfoxide (1 vol%)
Culturing: Putida_ML5_JBEI, 96 deep-well microplate; 1.2 mL volume, Aerobic, at 30 (C), shaken=700rpm
By: Matthew Incha on 12-Feb-19
Media components: 40 mM 3-(N-morpholino)propanesulfonic acid, 4 mM Tricine, 1.32 mM Potassium phosphate dibasic, 0.01 mM Iron (II) sulfate heptahydrate, 9.5 mM Ammonium chloride, 0.276 mM Aluminum potassium sulfate dodecahydrate, 0.0005 mM Calcium chloride, 0.525 mM Magnesium chloride hexahydrate, 50 mM Sodium Chloride, 3e-09 M Ammonium heptamolybdate tetrahydrate, 4e-07 M Boric Acid, 3e-08 M Cobalt chloride hexahydrate, 1e-08 M Copper (II) sulfate pentahydrate, 8e-08 M Manganese (II) chloride tetrahydrate, 1e-08 M Zinc sulfate heptahydrate

Specific Phenotypes

For 3 genes in this experiment

For carbon source Sodium propionate in Pseudomonas putida KT2440

For carbon source Sodium propionate across organisms

SEED Subsystems

Subsystem	#Specific
Flavodoxin	1
Methylcitrate cycle	1
Propionate-CoA to Succinate Module	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.