| | gene | name | fitness | t score | description | |
|---|
| b0683 | fur | -2.7 | -2.2 | ferric uptake regulator (NCBI) | compare |
| b1863 | ruvC | -2.5 | -3.3 | Holliday junction resolvase (NCBI) | compare |
| b3183 | obgE | -2.5 | -1.6 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b4676 | yoaK | -2.0 | -1.3 | expressed protein (RefSeq) | compare |
| b0200 | gmhB | -1.8 | -1.7 | hypothetical protein (NCBI) | compare |
| b2279 | nuoK | -1.6 | -2.7 | NADH dehydrogenase subunit K (NCBI) | compare |
| b1291 | sapD | -1.6 | -2.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b2330 | yfcB | -1.6 | -1.7 | putative adenine-specific methylase (VIMSS) | compare |
| b0564 | appY | -1.5 | -1.4 | DLP12 prophage; DNA-binding transcriptional activator (NCBI) | compare |
| b3979 | thrT | -1.4 | -0.7 | tRNA-Thr (NCBI) | compare |
| b0740 | tolB | -1.4 | -4.4 | translocation protein TolB precursor (NCBI) | compare |
| b4702 | mgtL | -1.4 | -2.2 | regulatory leader peptide for mgtA (NCBI) | compare |
| b1850 | eda | -1.4 | -2.9 | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase (NCBI) | compare |
| b0049 | apaH | -1.3 | -3.0 | diadenosinetetraphosphatase (NCBI) | compare |
| b0730 | mngR | -1.3 | -1.4 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b4375 | prfC | -1.3 | -3.0 | peptide chain release factor 3 (NCBI) | compare |
| b1192 | ldcA | -1.2 | -5.0 | L,D-carboxypeptidase A (NCBI) | compare |
| b2808 | gcvA | -1.2 | -3.6 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0149 | mrcB | -1.2 | -8.7 | penicillin-binding protein 1b (NCBI) | compare |
| b2894 | xerD | -1.2 | -1.0 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b4146 | yjeK | -1.2 | -1.7 | predicted lysine aminomutase (NCBI) | compare |
| b1429 | tehA | -1.2 | -1.4 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b1346 | ydaQ | -1.1 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b2282 | nuoH | -1.1 | -2.9 | NADH dehydrogenase subunit H (NCBI) | compare |
| b3706 | trmE | -1.1 | -3.1 | tRNA modification GTPase (NCBI) | compare |
| b2506 | yfgI | -1.1 | -1.8 | hypothetical protein (NCBI) | compare |
| b0726 | sucA | -1.1 | -3.1 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3613 | yibP | -1.1 | -3.0 | putative membrane protein (VIMSS) | compare |
| b3261 | fis | -1.1 | -1.6 | DNA-binding protein Fis (NCBI) | compare |
| b4570 | lomR | -1.0 | -2.0 | no description | compare |
| b2830 | nudH | -1.0 | -1.1 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b2614 | grpE | -0.9 | -2.1 | heat shock protein (NCBI) | compare |
| b0739 | tolA | -0.9 | -2.3 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b1613 | manA | -0.9 | -2.0 | mannose-6-phosphate isomerase (VIMSS) | compare |
| b2569 | lepA | -0.9 | -3.1 | GTP-binding protein LepA (NCBI) | compare |
| b2528 | iscA | -0.9 | -1.6 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1476 | fdnI | -0.9 | -1.3 | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible (NCBI) | compare |
| b4171 | miaA | -0.9 | -2.0 | tRNA delta(2)-isopentenylpyrophosphate transferase (NCBI) | compare |
| b1524 | yneH | -0.9 | -1.1 | predicted glutaminase (NCBI) | compare |
| b4426 | isrA | -0.9 | -2.0 | unknown RNA (NCBI) | compare |
| b0167 | glnD | -0.8 | -3.1 | PII uridylyl-transferase (NCBI) | compare |
| b0630 | lipB | -0.8 | -1.0 | protein of lipoate biosynthesis (VIMSS) | compare |
| b1575 | dicB | -0.8 | -1.6 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b3916 | pfkA | -0.8 | -1.5 | 6-phosphofructokinase (NCBI) | compare |
| b3002 | yqhA | -0.8 | -2.1 | hypothetical protein (NCBI) | compare |
| b0737 | tolQ | -0.8 | -1.7 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b1865 | nudB | -0.8 | -1.6 | dATP pyrophosphohydrolase (NCBI) | compare |
| b0688 | pgm | -0.8 | -2.1 | phosphoglucomutase (NCBI) | compare |
| b3237 | argR | -0.8 | -2.9 | arginine repressor (NCBI) | compare |
| b1567 | intK | -0.8 | -1.7 | Qin prophage; predicted protein (RefSeq) | compare |
| b3238 | yhcN | -0.8 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b0738 | tolR | -0.8 | -1.4 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4533 | ynfO | -0.7 | -1.5 | Qin prophage; predicted protein (NCBI) | compare |
| b2650 | ypjC | -0.7 | -0.4 | hypothetical protein (RefSeq) | compare |
| b0741 | pal | -0.7 | -2.1 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b3169 | nusA | -0.7 | -1.9 | transcription elongation factor NusA (NCBI) | compare |
| b2286 | nuoC | -0.7 | -3.2 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b0232 | yafN | -0.7 | -0.6 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3426 | glpD | -0.7 | -2.0 | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding (NCBI) | compare |
| b3021 | ygiT | -0.7 | -1.4 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1180 | ycgM | -0.7 | -2.7 | predicted isomerase/hydrolase (NCBI) | compare |
| b2356 | yfdM | -0.7 | -1.7 | orf, hypothetical protein (VIMSS) | compare |
| b4685 | yrbN | -0.7 | -1.7 | expressed protein (RefSeq) | compare |
| b2278 | nuoL | -0.7 | -4.2 | NADH dehydrogenase subunit L (NCBI) | compare |
| b2934 | cmtB | -0.7 | -0.6 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b4701 | sokX | -0.7 | -0.8 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1920 | fliY | -0.7 | -1.7 | cystine transporter subunit (NCBI) | compare |
| b4202 | rpsR | -0.7 | -0.8 | 30S ribosomal protein S18 (NCBI) | compare |
| b1689 | b1689 | -0.7 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b1742 | b1742 | -0.7 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3029 | ygiN | -0.7 | -2.1 | quinol monooxygenase (NCBI) | compare |
| b3778 | rep | -0.6 | -3.7 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b2281 | nuoI | -0.6 | -1.8 | NADH dehydrogenase subunit I (NCBI) | compare |
| b0386 | proC | -0.6 | -2.5 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b1348 | lar | -0.6 | -1.4 | Rac prophage; restriction alleviation protein (NCBI) | compare |
| b3811 | xerC | -0.6 | -0.9 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b2498 | upp | -0.6 | -1.5 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b3164 | pnp | -0.6 | -1.4 | polynucleotide phosphorylase/polyadenylase (RefSeq) | compare |
| b2939 | yqgB | -0.6 | -1.4 | predicted protein (RefSeq) | compare |
| b0018 | mokC | -0.6 | -1.1 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b1438 | ydcQ | -0.6 | -1.4 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b0163 | yaeH | -0.6 | -2.6 | hypothetical protein (NCBI) | compare |
| b2343 | b2343 | -0.6 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2221 | atoD | -0.6 | -1.8 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b2280 | nuoJ | -0.6 | -2.6 | NADH dehydrogenase subunit J (NCBI) | compare |
| b1877 | yecT | -0.6 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1690 | ydiM | -0.6 | -1.1 | predicted transporter (NCBI) | compare |
| b0888 | trxB | -0.6 | -1.8 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b1105 | ycfM | -0.6 | -2.4 | predicted outer membrane lipoprotein (NCBI) | compare |
| b4414 | tff | -0.6 | -1.6 | unknown RNA (NCBI) | compare |
| b1074 | flgC | -0.6 | -1.8 | flagellar basal-body rod protein C (NCBI) | compare |
| b1727 | yniC | -0.6 | -1.6 | predicted hydrolase (NCBI) | compare |
| b1739 | osmE | -0.6 | -1.1 | DNA-binding transcriptional activator (NCBI) | compare |
| b3741 | gidA | -0.6 | -1.7 | glucose-inhibited division protein A (NCBI) | compare |
| b2277 | nuoM | -0.6 | -2.7 | NADH dehydrogenase subunit M (NCBI) | compare |
| b2518 | ndk | -0.6 | -1.2 | nucleoside diphosphate kinase (NCBI) | compare |
| b3636 | rpmG | -0.6 | -0.8 | 50S ribosomal protein L33 (NCBI) | compare |
| b4242 | mgtA | -0.6 | -3.9 | magnesium transporter (NCBI) | compare |
| b4520 | ymgF | -0.6 | -0.9 | hypothetical protein (NCBI) | compare |
| b2540 | hcaC | -0.6 | -2.0 | 3-phenylpropionate dioxygenase, predicted ferredoxin subunit (NCBI) | compare |
| b1279 | yciS | -0.6 | -0.9 | conserved inner membrane protein (NCBI) | compare |
| b4163 | glyV | -0.6 | -1.2 | tRNA-Gly (NCBI) | compare |
| b1426 | ydcH | -0.6 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3398 | yrfF | -0.6 | -2.0 | predicted inner membrane protein (NCBI) | compare |
| b2962 | yggX | -0.5 | -1.9 | hypothetical protein (NCBI) | compare |
| b2895 | fldB | -0.5 | -1.9 | flavodoxin 2 (NCBI) | compare |
| b3469 | zntA | -0.5 | -3.3 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b0125 | hpt | -0.5 | -2.5 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b2642 | yfjW | -0.5 | -0.7 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b1762 | b1762 | -0.5 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1337 | abgB | -0.5 | -1.8 | predicted peptidase, aminobenzoyl-glutamate utilization protein (NCBI) | compare |
| b3889 | yiiE | -0.5 | -1.0 | predicted transcriptional regulator (RefSeq) | compare |
| b4435 | isrC | -0.5 | -1.4 | unknown RNA (NCBI) | compare |
| b3157 | yhbT | -0.5 | -2.2 | predicted lipid carrier protein (NCBI) | compare |
| b4451 | ryhB | -0.5 | -0.9 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b1765 | ydjA | -0.5 | -0.6 | predicted oxidoreductase (NCBI) | compare |
| b4179 | vacB | -0.5 | -2.6 | putative enzyme (VIMSS) | compare |
| b1344 | ydaO | -0.5 | -1.9 | predicted C32 tRNA thiolase (NCBI) | compare |
| b2567 | rnc | -0.5 | -0.3 | ribonuclease III (NCBI) | compare |
| b1773 | ydjI | -0.5 | -1.1 | predicted aldolase (NCBI) | compare |
| b4509 | ylcG | -0.5 | -1.3 | DLP12 prophage; predicted protein (NCBI) | compare |
| b3500 | gor | -0.5 | -0.9 | glutathione reductase (NCBI) | compare |
| b0676 | nagC | -0.5 | -2.8 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b1465 | narV | -0.5 | -1.5 | nitrate reductase 2 (NRZ), gamma subunit (NCBI) | compare |
| b0889 | lrp | -0.5 | -1.4 | DNA-binding transcriptional dual regulator, leucine-binding (NCBI) | compare |
| b4686 | yshB | -0.5 | -1.3 | expressed protein (RefSeq) | compare |
| b3726 | pstA | -0.5 | -2.1 | phosphate transporter subunit (NCBI) | compare |
| b1236 | galU | -0.5 | -1.9 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0506 | allR | -0.5 | -2.5 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1185 | dsbB | -0.5 | -1.6 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b4614 | sokA | -0.5 | -1.3 | no description | compare |
| b3620 | rfaF | -0.5 | -2.1 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b1442 | ydcU | -0.5 | -1.8 | predicted spermidine/putrescine transporter subunit (NCBI) | compare |
| b4497 | yeeL | -0.5 | -0.6 | no description | compare |
| b0053 | surA | -0.5 | -2.4 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2912 | ygfA | -0.5 | -1.6 | putative ligase (VIMSS) | compare |
| b1735 | chbR | -0.5 | -1.4 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b2017 | yefM | -0.5 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b0783 | moaC | -0.5 | -2.5 | molybdenum cofactor biosynthesis protein C (NCBI) | compare |
| b2707 | srlR | -0.5 | -2.2 | DNA-bindng transcriptional repressor (NCBI) | compare |
| b0509 | glxR | -0.5 | -2.7 | tartronate semialdehyde reductase, NADH-dependent (NCBI) | compare |
| b4618 | tisB | -0.5 | -1.6 | lexA-regulated toxic peptide (RefSeq) | compare |
| b1969 | yedW | -0.5 | -1.8 | putative 2-component transcriptional regulator (VIMSS) | compare |
| b1143 | ymfI | -0.5 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b1692 | ydiB | -0.5 | -1.3 | quinate/shikimate 5-dehydrogenase, NAD(P)-binding (NCBI) | compare |
| b1130 | phoP | -0.5 | -0.3 | DNA-binding response regulator in two-component regulatory system with PhoQ (NCBI) | compare |
| b4178 | yjeB | -0.5 | -1.9 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b3348 | slyX | -0.5 | -2.0 | hypothetical protein (NCBI) | compare |
| b0990 | cspG | -0.5 | -0.5 | DNA-binding transcriptional regulator (NCBI) | compare |
| b4048 | yjbM | -0.5 | -0.3 | hypothetical protein (NCBI) | compare |
| b0677 | nagA | -0.5 | -2.4 | N-acetylglucosamine-6-phosphate deacetylase (NCBI) | compare |
| b0460 | hha | -0.5 | -1.9 | modulator of gene expression, with H-NS (NCBI) | compare |
| b1306 | pspC | -0.5 | -1.8 | DNA-binding transcriptional activator (NCBI) | compare |
| b4502 | yeiW | -0.5 | -2.1 | hypothetical protein (NCBI) | compare |
| b1258 | yciF | -0.5 | -0.4 | hypothetical protein (NCBI) | compare |
| b4481 | rffT | -0.5 | -2.5 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b1647 | ydhF | -0.5 | -1.7 | predicted oxidoreductase (NCBI) | compare |
| b3631 | rfaG | -0.5 | -3.6 | glucosyltransferase I (NCBI) | compare |
| b3393 | yrfB | -0.5 | -2.4 | hypothetical protein (NCBI) | compare |
| b1600 | mdtJ | -0.5 | -0.8 | multidrug efflux system transporter (NCBI) | compare |
| b2790 | yqcA | -0.5 | -1.8 | flavodoxin (NCBI) | compare |
| b0289 | yagV | -0.5 | -2.0 | orf, hypothetical protein (VIMSS) | compare |
| b3205 | yhbJ | -0.5 | -1.9 | hypothetical protein (NCBI) | compare |
| b2168 | fruK | -0.5 | -0.7 | 1-phosphofructokinase (NCBI) | compare |
| b1063 | yceB | -0.5 | -1.3 | predicted lipoprotein (NCBI) | compare |
| b1248 | b1248 | -0.4 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b4546 | ypeB | -0.4 | -0.8 | hypothetical protein (NCBI) | compare |
| b2698 | recX | -0.4 | -1.3 | RecA regulator RecX (NCBI) | compare |
| b1563 | relE | -0.4 | -0.6 | Qin prophage; toxin of the RelE-RelB toxin-antitoxin system (NCBI) | compare |
| b4191 | ulaR | -0.4 | -1.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1676 | pykF | -0.4 | -1.4 | pyruvate kinase (NCBI) | compare |
| b1217 | chaB | -0.4 | -0.7 | cation transport regulator (NCBI) | compare |
| b2263 | yfbB | -0.4 | -1.1 | predicted peptidase (NCBI) | compare |
| b0890 | ftsK | -0.4 | -1.4 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b3131 | agaR | -0.4 | -1.8 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1165 | ymgA | -0.4 | -0.3 | hypothetical protein (NCBI) | compare |
| b3100 | yqjK | -0.4 | -1.6 | hypothetical protein (NCBI) | compare |
| b2127 | mlrA | -0.4 | -2.3 | DNA-binding transcriptional regulator (NCBI) | compare |
| b4408 | csrB | -0.4 | -1.6 | CsrA-binding sRNA, antagonizing CsrA regulation (NCBI) | compare |
| b3658 | selC | -0.4 | -1.0 | tRNA-Sec (NCBI) | compare |
| b1963 | b1963 | -0.4 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b1734 | chbF | -0.4 | -2.3 | cryptic phospho-beta-glucosidase, NAD(P)-binding (NCBI) | compare |
| b2699 | recA | -0.4 | -0.4 | recombinase A (NCBI) | compare |
| b1777 | b1777 | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b4243 | yjgF | -0.4 | -2.1 | orf, hypothetical protein (VIMSS) | compare |
| b4196 | ulaD | -0.4 | -2.3 | 3-keto-L-gulonate 6-phosphate decarboxylase (NCBI) | compare |
| b2198 | ccmD | -0.4 | -1.4 | cytochrome c biogenesis protein (NCBI) | compare |
| b2674 | nrdI | -0.4 | -1.4 | hypothetical protein (NCBI) | compare |
| b2301 | yfcF | -0.4 | -1.8 | predicted enzyme (NCBI) | compare |
| b2840 | ygeA | -0.4 | -2.3 | predicted racemase (NCBI) | compare |
| b4590 | ybfK | -0.4 | -0.3 | hypothetical protein (RefSeq) | compare |
| b0080 | fruR | -0.4 | -2.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0014 | dnaK | -0.4 | -0.8 | molecular chaperone DnaK (NCBI) | compare |
| b2734 | pphB | -0.4 | -1.4 | serine/threonine-specific protein phosphatase 2 (NCBI) | compare |
| b3493 | pitA | -0.4 | -2.3 | phosphate transporter, low-affinity (NCBI) | compare |
| b3962 | udhA | -0.4 | -2.2 | putative oxidoreductase (VIMSS) | compare |
| b2859 | ygeO | -0.4 | -0.7 | hypothetical protein (RefSeq) | compare |
| b1305 | pspB | -0.4 | -0.9 | phage shock protein B (NCBI) | compare |
| b4215 | ytfI | -0.4 | -0.7 | hypothetical protein (NCBI) | compare |
| b0953 | rmf | -0.4 | -1.3 | ribosome modulation factor (NCBI) | compare |