Experiment set12IT031 for Pseudomonas putida KT2440

Compare to:

Vanillin carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_3952 -8.2 -5.7 3-oxoadipate CoA-transferase subunit A compare
PP_4656 -8.0 -5.5 protocatechuate 3,4-dioxygenase beta chain compare
PP_1379 -7.5 -5.2 3-carboxy-cis,cis-muconate cycloisomerase compare
PP_1377 -7.5 -7.3 beta-ketoadipyl-CoA thiolase compare
PP_3736 -7.2 -9.9 vanillate O-demethylase oxygenase subunit compare
PP_1380 -7.1 -6.9 3-oxoadipate enol-lactonase 2 compare
PP_4655 -6.4 -12.9 protocatechuate 3,4-dioxygenase alpha chain compare
PP_1375 -6.2 -15.1 transcription regulatory protein (pca regulon) compare
PP_3737 -6.0 -11.5 vanillate O-demethylase oxidoreductase compare
PP_1616 -4.6 -11.7 formaldehyde dehydrogenase, glutathione-dependent compare
PP_3828 -3.9 -9.8 Molybdate-binding periplasmic protein compare
PP_2123 -3.8 -9.6 molybdenum::molybdopterin ligase compare
PP_1292 -3.7 -5.9 Cyclic pyranopterin monophosphate synthase accessory protein compare
PP_4597 -2.9 -6.4 Cyclic pyranopterin monophosphate synthase compare
PP_4231 -2.5 -5.5 putative Xanthine dehydrogenase accessory factor compare
PP_3621 -2.4 -5.9 vanillin dehydrogenase, iorA-like component (from data) compare
PP_3622 -2.3 -12.3 vanillin dehydrogenase, iorB-like component (from data) compare
PP_1615 -2.2 -6.3 Transcriptional regulator, LysR family compare
PP_3830 -2.2 -9.3 Molybdenum import ATP-binding protein ModC compare
PP_3623 -1.6 -7.9 vanillin dehydrogenase, cytochrome c component (from data) compare
PP_3493 -1.5 -6.1 Transcriptional regulator, LysR family compare
PP_1395 -1.4 -8.4 Transcriptional regulator, AraC family compare
PP_0988 -1.3 -7.8 glycine dehydrogenase compare


Specific phenotypes for carbon source Vanillin across organisms