| | gene | name | fitness | t score | description | |
|---|
| b1290 | sapF | -1.8 | -2.3 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3183 | obgE | -1.8 | -1.6 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b1865 | nudB | -1.7 | -2.2 | dATP pyrophosphohydrolase (NCBI) | compare |
| b2934 | cmtB | -1.7 | -1.1 | predicted mannitol-specific enzyme IIA component of PTS (NCBI) | compare |
| b1863 | ruvC | -1.7 | -2.6 | Holliday junction resolvase (NCBI) | compare |
| b0049 | apaH | -1.6 | -3.4 | diadenosinetetraphosphatase (NCBI) | compare |
| b3979 | thrT | -1.5 | -0.7 | tRNA-Thr (NCBI) | compare |
| b1291 | sapD | -1.2 | -2.1 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b3863 | polA | -1.2 | -0.8 | DNA polymerase I (NCBI) | compare |
| b2168 | fruK | -1.2 | -1.1 | 1-phosphofructokinase (NCBI) | compare |
| b0739 | tolA | -1.2 | -2.8 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b4655 | ythA | -1.2 | -1.8 | expressed protein (RefSeq) | compare |
| b0200 | gmhB | -1.2 | -1.5 | hypothetical protein (NCBI) | compare |
| b2330 | yfcB | -1.1 | -1.6 | putative adenine-specific methylase (VIMSS) | compare |
| b3261 | fis | -1.1 | -1.6 | DNA-binding protein Fis (NCBI) | compare |
| b0149 | mrcB | -1.1 | -8.1 | penicillin-binding protein 1b (NCBI) | compare |
| b1361 | ydaW | -1.1 | -0.7 | orf, hypothetical protein (VIMSS) | compare |
| b4603 | rseX | -1.1 | -0.9 | sRNA regulating ompA and ompC translation, with Hfq (RefSeq) | compare |
| b2279 | nuoK | -1.1 | -2.1 | NADH dehydrogenase subunit K (NCBI) | compare |
| b0542 | renD | -1.0 | -2.2 | orf, hypothetical protein (VIMSS) | compare |
| b1293 | sapB | -1.0 | -1.2 | predicted antimicrobial peptide transporter subunit (NCBI) | compare |
| b1429 | tehA | -1.0 | -1.3 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b0386 | proC | -1.0 | -3.8 | pyrroline-5-carboxylate reductase (NCBI) | compare |
| b0740 | tolB | -1.0 | -3.4 | translocation protein TolB precursor (NCBI) | compare |
| b2939 | yqgB | -1.0 | -2.1 | predicted protein (RefSeq) | compare |
| b2498 | upp | -1.0 | -2.4 | uracil phosphoribosyltransferase (VIMSS) | compare |
| b0726 | sucA | -1.0 | -2.9 | alpha-ketoglutarate decarboxylase (NCBI) | compare |
| b3613 | yibP | -1.0 | -2.8 | putative membrane protein (VIMSS) | compare |
| b3916 | pfkA | -1.0 | -1.7 | 6-phosphofructokinase (NCBI) | compare |
| b0741 | pal | -0.9 | -2.6 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b4375 | prfC | -0.9 | -2.9 | peptide chain release factor 3 (NCBI) | compare |
| b4676 | yoaK | -0.9 | -0.9 | expressed protein (RefSeq) | compare |
| b4146 | yjeK | -0.9 | -1.6 | predicted lysine aminomutase (NCBI) | compare |
| b2808 | gcvA | -0.8 | -2.7 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b1236 | galU | -0.8 | -3.0 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b1882 | cheY | -0.8 | -0.7 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b4513 | kdpF | -0.8 | -2.5 | potassium ion accessory transporter subunit (NCBI) | compare |
| b2288 | nuoA | -0.8 | -2.0 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1677 | lpp | -0.8 | -1.2 | murein lipoprotein (NCBI) | compare |
| b3962 | udhA | -0.8 | -4.3 | putative oxidoreductase (VIMSS) | compare |
| b1727 | yniC | -0.8 | -2.5 | predicted hydrolase (NCBI) | compare |
| b0730 | mngR | -0.8 | -1.1 | DNA-binding transcriptional dual regulator, fatty-acyl-binding (NCBI) | compare |
| b3021 | ygiT | -0.8 | -2.1 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b0912 | ihfB | -0.8 | -3.0 | integration host factor subunit beta (NCBI) | compare |
| b4438 | cyaR | -0.8 | -2.4 | sRNA effector of ompX mRNA instability, cAMP-induced; hfq-dependent (RefSeq) | compare |
| b3706 | trmE | -0.8 | -2.7 | tRNA modification GTPase (NCBI) | compare |
| b2650 | ypjC | -0.8 | -0.5 | hypothetical protein (RefSeq) | compare |
| b1712 | ihfA | -0.8 | -1.1 | integration host factor subunit alpha (NCBI) | compare |
| b1575 | dicB | -0.8 | -1.3 | Qin prophage; cell division inhibition protein (NCBI) | compare |
| b0167 | glnD | -0.8 | -3.0 | PII uridylyl-transferase (NCBI) | compare |
| b0888 | trxB | -0.7 | -2.5 | thioredoxin reductase, FAD/NAD(P)-binding (NCBI) | compare |
| b1258 | yciF | -0.7 | -0.5 | hypothetical protein (NCBI) | compare |
| b0738 | tolR | -0.7 | -1.6 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b4520 | ymgF | -0.7 | -1.2 | hypothetical protein (NCBI) | compare |
| b0502 | ylbG | -0.7 | -2.2 | no description | compare |
| b0990 | cspG | -0.7 | -0.6 | DNA-binding transcriptional regulator (NCBI) | compare |
| b3741 | gidA | -0.7 | -2.3 | glucose-inhibited division protein A (NCBI) | compare |
| b1286 | rnb | -0.7 | -1.5 | exoribonuclease II (NCBI) | compare |
| b0018 | mokC | -0.7 | -1.2 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b2576 | srmB | -0.7 | -2.0 | ATP-dependent RNA helicase (NCBI) | compare |
| b3500 | gor | -0.7 | -1.2 | glutathione reductase (NCBI) | compare |
| b1195 | ymgE | -0.7 | -2.2 | predicted inner membrane protein (NCBI) | compare |
| b3098 | yqjD | -0.7 | -1.5 | hypothetical protein (NCBI) | compare |
| b0688 | pgm | -0.7 | -2.0 | phosphoglucomutase (NCBI) | compare |
| b2280 | nuoJ | -0.7 | -3.0 | NADH dehydrogenase subunit J (NCBI) | compare |
| b3493 | pitA | -0.7 | -3.7 | phosphate transporter, low-affinity (NCBI) | compare |
| b2286 | nuoC | -0.6 | -3.0 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1842 | holE | -0.6 | -1.5 | DNA polymerase III, theta subunit (NCBI) | compare |
| b3649 | rpoZ | -0.6 | -1.9 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b2017 | yefM | -0.6 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b0530 | sfmA | -0.6 | -1.7 | putative fimbrial-like protein (VIMSS) | compare |
| b0460 | hha | -0.6 | -2.5 | modulator of gene expression, with H-NS (NCBI) | compare |
| b1185 | dsbB | -0.6 | -1.9 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b1192 | ldcA | -0.6 | -2.5 | L,D-carboxypeptidase A (NCBI) | compare |
| b2276 | nuoN | -0.6 | -2.6 | NADH:ubiquinone oxidoreductase, membrane subunit N (RefSeq) | compare |
| b0238 | gpt | -0.6 | -2.3 | xanthine phosphoribosyltransferase (NCBI) | compare |
| b0729 | sucD | -0.6 | -2.1 | succinyl-CoA synthetase subunit alpha (NCBI) | compare |
| b4458 | oxyS | -0.6 | -1.0 | global regulatory RNA (NCBI) | compare |
| b3002 | yqhA | -0.6 | -0.8 | hypothetical protein (NCBI) | compare |
| b1090 | plsX | -0.6 | -2.9 | glycerolphosphate auxotrophy in plsB background (VIMSS) | compare |
| b4460 | araH | -0.6 | -2.0 | fused L-arabinose transporter subunits of ABC superfamily: membrane components (RefSeq) | compare |
| b2281 | nuoI | -0.6 | -1.7 | NADH dehydrogenase subunit I (NCBI) | compare |
| b2343 | b2343 | -0.6 | -1.0 | orf, hypothetical protein (VIMSS) | compare |
| b2278 | nuoL | -0.6 | -3.7 | NADH dehydrogenase subunit L (NCBI) | compare |
| b0247 | ykfG | -0.6 | -0.9 | CP4-6 prophage; predicted DNA repair protein (NCBI) | compare |
| b0101 | yacG | -0.6 | -1.3 | zinc-binding protein (NCBI) | compare |
| b0836 | yliH | -0.6 | -1.7 | hypothetical protein (NCBI) | compare |
| b4242 | mgtA | -0.6 | -3.9 | magnesium transporter (NCBI) | compare |
| b4685 | yrbN | -0.6 | -1.3 | expressed protein (RefSeq) | compare |
| b1362 | rzpR | -0.6 | -1.4 | putative Rac prophage endopeptidase (VIMSS) | compare |
| b2277 | nuoM | -0.6 | -2.6 | NADH dehydrogenase subunit M (NCBI) | compare |
| b4194 | ulaB | -0.6 | -2.0 | L-ascorbate-specific enzyme IIB component of PTS (NCBI) | compare |
| b3545 | proK | -0.6 | -1.4 | tRNA-Pro (NCBI) | compare |
| b3806 | cyaA | -0.5 | -2.2 | adenylate cyclase (NCBI) | compare |
| b4546 | ypeB | -0.5 | -1.0 | hypothetical protein (NCBI) | compare |
| b1179 | ycgL | -0.5 | -1.6 | conserved protein (NCBI) | compare |
| b1877 | yecT | -0.5 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0605 | ahpC | -0.5 | -1.9 | alkyl hydroperoxide reductase, C22 subunit (NCBI) | compare |
| b1550 | b1550 | -0.5 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2859 | ygeO | -0.5 | -1.0 | hypothetical protein (RefSeq) | compare |
| b4570 | lomR | -0.5 | -1.2 | no description | compare |
| b3071 | yqjI | -0.5 | -2.0 | predicted transcriptional regulator (NCBI) | compare |
| b1693 | aroD | -0.5 | -2.5 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b1248 | b1248 | -0.5 | -1.8 | orf, hypothetical protein (VIMSS) | compare |
| b1434 | ydcN | -0.5 | -1.2 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b2912 | ygfA | -0.5 | -1.7 | putative ligase (VIMSS) | compare |
| b2283 | nuoG | -0.5 | -2.9 | NADH:ubiquinone oxidoreductase, chain G (RefSeq) | compare |
| b3101 | yqjF | -0.5 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b1368 | ynaA | -0.5 | -1.4 | Rac prophage; predicted tail protein (RefSeq) | compare |
| b4041 | plsB | -0.5 | -1.2 | glycerol-3-phosphate acyltransferase (VIMSS) | compare |
| b1109 | ndh | -0.5 | -2.2 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b2567 | rnc | -0.5 | -0.3 | ribonuclease III (NCBI) | compare |
| b4702 | mgtL | -0.5 | -1.0 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3398 | yrfF | -0.5 | -1.8 | predicted inner membrane protein (NCBI) | compare |
| b4179 | vacB | -0.5 | -2.6 | putative enzyme (VIMSS) | compare |
| b4410 | ecnA | -0.5 | -1.0 | entericidin A membrane lipoprotein, antidote entericidin B (NCBI) | compare |
| b1217 | chaB | -0.5 | -0.7 | cation transport regulator (NCBI) | compare |
| b1762 | b1762 | -0.5 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b2448 | yffQ | -0.5 | -1.8 | CPZ-55 prophage; predicted protein (RefSeq) | compare |
| b1155 | ymfS | -0.5 | -2.3 | e14 prophage; predicted protein (NCBI) | compare |
| b0630 | lipB | -0.5 | -0.7 | protein of lipoate biosynthesis (VIMSS) | compare |
| b2846 | yqeH | -0.5 | -0.3 | orf, hypothetical protein (VIMSS) | compare |
| b2553 | glnB | -0.5 | -2.3 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b3842 | rfaH | -0.5 | -2.2 | transcriptional activator RfaH (NCBI) | compare |
| b1871 | yecP | -0.5 | -1.8 | predicted S-adenosyl-L-methionine-dependent methyltransferase (NCBI) | compare |
| b2894 | xerD | -0.5 | -0.6 | site-specific tyrosine recombinase XerD (NCBI) | compare |
| b1855 | lpxM | -0.5 | -2.2 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b0764 | modB | -0.5 | -2.1 | molybdate ABC transporter permease protein (NCBI) | compare |
| b1520 | b1520 | -0.5 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b3890 | yiiF | -0.5 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b4451 | ryhB | -0.5 | -1.0 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b0430 | cyoC | -0.5 | -2.3 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b4406 | yaeP | -0.5 | -1.2 | hypothetical protein (NCBI) | compare |
| b1890 | motA | -0.5 | -1.2 | flagellar motor protein MotA (NCBI) | compare |
| b2376 | ypdI | -0.5 | -1.4 | predicted lipoprotein involved in colanic acid biosynthesis (NCBI) | compare |
| b3616 | tdh | -0.5 | -2.4 | L-threonine 3-dehydrogenase (NCBI) | compare |
| b4163 | glyV | -0.5 | -0.9 | tRNA-Gly (NCBI) | compare |
| b2104 | thiM | -0.4 | -2.0 | hydroxyethylthiazole kinase (NCBI) | compare |
| b4373 | rimI | -0.4 | -1.5 | ribosomal-protein-alanine N-acetyltransferase (NCBI) | compare |
| b1506 | yneL | -0.4 | -0.8 | predicted transcriptional regulator (NCBI) | compare |
| b1580 | rspB | -0.4 | -2.2 | predicted oxidoreductase, Zn-dependent and NAD(P)-binding (NCBI) | compare |
| b4501 | torI | -0.4 | -1.9 | response regulator inhibitor for tor operon (NCBI) | compare |
| b1690 | ydiM | -0.4 | -1.0 | predicted transporter (NCBI) | compare |
| b2804 | fucU | -0.4 | -1.4 | L-fucose mutarotase (NCBI) | compare |
| b1083 | flgL | -0.4 | -1.7 | flagellar hook-associated protein L (NCBI) | compare |
| b3437 | gntK | -0.4 | -2.5 | gluconokinase 2, thermoresistant (VIMSS) | compare |
| b2513 | yfgM | -0.4 | -2.0 | hypothetical protein (NCBI) | compare |
| b0125 | hpt | -0.4 | -2.0 | hypoxanthine phosphoribosyltransferase (VIMSS) | compare |
| b1860 | ruvB | -0.4 | -0.4 | Holliday junction DNA helicase B (NCBI) | compare |
| b2518 | ndk | -0.4 | -1.2 | nucleoside diphosphate kinase (NCBI) | compare |
| b1304 | pspA | -0.4 | -1.5 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b4243 | yjgF | -0.4 | -2.4 | orf, hypothetical protein (VIMSS) | compare |
| b1524 | yneH | -0.4 | -0.6 | predicted glutaminase (NCBI) | compare |
| b0406 | tgt | -0.4 | -2.2 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b4701 | sokX | -0.4 | -0.4 | sok-related sRNA, function unknown (RefSeq) | compare |
| b1279 | yciS | -0.4 | -0.6 | conserved inner membrane protein (NCBI) | compare |
| b0789 | ybhO | -0.4 | -2.3 | cardiolipin synthase 2 (NCBI) | compare |
| b0503 | ybbB | -0.4 | -2.1 | tRNA 2-selenouridine synthase, selenophosphate-dependent (NCBI) | compare |
| b0504 | ybbS | -0.4 | -1.8 | DNA-binding transcriptional activator of the allD operon (NCBI) | compare |
| b0965 | b0965 | -0.4 | -1.2 | orf, hypothetical protein (VIMSS) | compare |
| b0780 | ybhK | -0.4 | -1.8 | predicted transferase with NAD(P)-binding Rossmann-fold domain (NCBI) | compare |
| b0161 | degP | -0.4 | -2.5 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b0437 | clpP | -0.4 | -2.1 | ATP-dependent Clp protease proteolytic subunit (NCBI) | compare |
| b0953 | rmf | -0.4 | -1.1 | ribosome modulation factor (NCBI) | compare |
| b1778 | yeaA | -0.4 | -1.3 | methionine sulfoxide reductase B (NCBI) | compare |
| b4191 | ulaR | -0.4 | -1.5 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b3469 | zntA | -0.4 | -2.5 | zinc, cobalt and lead efflux system (NCBI) | compare |
| b3205 | yhbJ | -0.4 | -1.6 | hypothetical protein (NCBI) | compare |
| b0676 | nagC | -0.4 | -2.6 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b1553 | ydfP | -0.4 | -0.8 | Qin prophage; conserved protein (NCBI) | compare |
| b0683 | fur | -0.4 | -0.5 | ferric uptake regulator (NCBI) | compare |
| b0696 | kdpC | -0.4 | -1.2 | potassium-transporting ATPase subunit C (NCBI) | compare |
| b3378 | yhfU | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b2528 | iscA | -0.4 | -0.8 | iron-sulfur cluster assembly protein (NCBI) | compare |
| b1533 | ydeD | -0.4 | -1.1 | orf, hypothetical protein (VIMSS) | compare |
| b3169 | nusA | -0.4 | -1.3 | transcription elongation factor NusA (NCBI) | compare |
| b1884 | cheR | -0.4 | -2.0 | chemotaxis regulator, protein-glutamate methyltransferase (NCBI) | compare |
| b2163 | yeiL | -0.4 | -1.9 | putative transcriptional regulator (VIMSS) | compare |
| b4202 | rpsR | -0.4 | -0.5 | 30S ribosomal protein S18 (NCBI) | compare |
| b3778 | rep | -0.4 | -2.4 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b4505 | insX | -0.4 | -0.5 | predicted IS protein (RefSeq) | compare |
| b4445 | omrB | -0.4 | -1.1 | sRNA down regulates OM proteins; positively regulated by OmpR/EnvZ; binds Hfq (RefSeq) | compare |
| b2637 | yfjT | -0.4 | -1.0 | CP4-57 prophage; predicted protein (NCBI) | compare |
| b4535 | yniD | -0.4 | -0.5 | predicted protein (RefSeq) | compare |
| b1686 | ydiI | -0.4 | -0.8 | hypothetical protein (NCBI) | compare |
| b1603 | pntA | -0.4 | -1.6 | NAD(P) transhydrogenase subunit alpha (NCBI) | compare |
| b1261 | trpB | -0.4 | -0.9 | tryptophan synthase subunit beta (NCBI) | compare |
| b2434 | b2434 | -0.4 | -1.4 | orf, hypothetical protein (VIMSS) | compare |
| b1634 | tppB | -0.4 | -1.9 | putative tripeptide transporter permease (NCBI) | compare |
| b2435 | amiA | -0.4 | -1.5 | N-acetylmuramoyl-l-alanine amidase I (NCBI) | compare |
| b0310 | ykgH | -0.4 | -0.5 | predicted inner membrane protein (NCBI) | compare |
| b0722 | sdhD | -0.4 | -1.7 | succinate dehydrogenase cytochrome b556 small membrane subunit (NCBI) | compare |
| b3601 | mtlR | -0.4 | -2.3 | DNA-binding repressor (NCBI) | compare |
| b3075 | ebgR | -0.4 | -2.0 | DNA-binding transcriptional repressor (NCBI) | compare |
| b1285 | gmr | -0.4 | -2.0 | modulator of Rnase II stability (NCBI) | compare |
| b3094 | exuR | -0.4 | -1.9 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b3250 | mreC | -0.4 | -0.9 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b3726 | pstA | -0.4 | -1.5 | phosphate transporter subunit (NCBI) | compare |
| b1235 | rssB | -0.4 | -2.2 | response regulator of RpoS (NCBI) | compare |
| b1735 | chbR | -0.4 | -1.1 | DNA-binding transcriptional dual regulator (NCBI) | compare |