| | gene | name | fitness | t score | description | |
|---|
| b1855 | lpxM | -5.5 | -3.8 | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (NCBI) | compare |
| b3035 | tolC | -4.9 | -5.9 | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | compare |
| b0957 | ompA | -4.3 | -4.2 | outer membrane protein A (3a;II*;G;d) (NCBI) | compare |
| b2346 | vacJ | -4.3 | -9.1 | predicted lipoprotein (NCBI) | compare |
| b0178 | hlpA | -4.2 | -6.4 | periplasmic chaperone (NCBI) | compare |
| b2512 | yfgL | -4.1 | -5.6 | protein assembly complex, lipoprotein component (NCBI) | compare |
| b0912 | ihfB | -3.9 | -5.8 | integration host factor subunit beta (NCBI) | compare |
| b3163 | nlpI | -3.8 | -5.2 | hypothetical protein (NCBI) | compare |
| b4201 | priB | -3.6 | -4.1 | primosomal replication protein N (NCBI) | compare |
| b1830 | prc | -3.5 | -3.4 | carboxy-terminal protease for penicillin-binding protein 3 (NCBI) | compare |
| b2174 | b2174 | -3.4 | -10.9 | orf, hypothetical protein (VIMSS) | compare |
| b1192 | ldcA | -3.4 | -6.8 | L,D-carboxypeptidase A (NCBI) | compare |
| b3935 | priA | -3.4 | -3.9 | primosome assembly protein PriA (NCBI) | compare |
| b2616 | recN | -3.3 | -13.1 | recombination and repair protein (NCBI) | conserved |
| b3792 | wzxE | -3.2 | -4.4 | O-antigen translocase (NCBI) | compare |
| b0053 | surA | -3.1 | -6.3 | peptidyl-prolyl cis-trans isomerase (PPIase) (NCBI) | compare |
| b2494 | yfgC | -3.1 | -10.2 | predicted peptidase (NCBI) | compare |
| b1765 | ydjA | -3.0 | -1.5 | predicted oxidoreductase (NCBI) | compare |
| b3199 | yrbK | -3.0 | -4.0 | hypothetical protein (NCBI) | compare |
| b2617 | smpA | -2.9 | -4.4 | small membrane protein A (VIMSS) | compare |
| b2317 | dedA | -2.8 | -7.2 | conserved inner membrane protein (NCBI) | compare |
| b3195 | yrbF | -2.8 | -13.6 | predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) | compare |
| b1677 | lpp | -2.8 | -3.2 | murein lipoprotein (NCBI) | compare |
| b3192 | yrbC | -2.7 | -12.5 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b3194 | yrbE | -2.6 | -14.4 | predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) | compare |
| b3621 | rfaC | -2.6 | -3.1 | ADP-heptose:LPS heptosyl transferase I (NCBI) | compare |
| b3193 | yrbD | -2.5 | -11.6 | predicted ABC-type organic solvent transporter (NCBI) | compare |
| b0462 | acrB | -2.5 | -18.2 | multidrug efflux system protein (NCBI) | compare |
| b1236 | galU | -2.5 | -2.4 | glucose-1-phosphate uridylyltransferase (NCBI) | compare |
| b0222 | lpcA | -2.5 | -2.9 | phosphoheptose isomerase (NCBI) | compare |
| b1882 | cheY | -2.5 | -1.2 | chemotaxis regulator transmitting signal to flagellar motor component (NCBI) | compare |
| b4481 | rffT | -2.4 | -8.3 | 4-alpha-L-fucosyltransferase (NCBI) | compare |
| b0463 | acrA | -2.4 | -12.8 | multidrug efflux system (NCBI) | compare |
| b3631 | rfaG | -2.4 | -12.7 | glucosyltransferase I (NCBI) | compare |
| b3613 | yibP | -2.3 | -2.2 | putative membrane protein (VIMSS) | compare |
| b3191 | yrbB | -2.3 | -9.8 | orf, hypothetical protein (VIMSS) | compare |
| b0149 | mrcB | -2.2 | -14.1 | penicillin-binding protein 1b (NCBI) | compare |
| b0688 | pgm | -2.2 | -3.3 | phosphoglucomutase (NCBI) | compare |
| b3619 | rfaD | -2.1 | -2.9 | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding (NCBI) | compare |
| b3052 | rfaE | -2.1 | -5.3 | fused heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (NCBI) | compare |
| b3620 | rfaF | -2.1 | -5.7 | ADP-heptose:LPS heptosyltransferase II (NCBI) | compare |
| b2509 | xseA | -2.1 | -9.8 | exodeoxyribonuclease VII large subunit (NCBI) | conserved |
| b3790 | rffC | -2.1 | -6.4 | TDP-fucosamine acetyltransferase (RefSeq) | compare |
| b1261 | trpB | -2.0 | -3.7 | tryptophan synthase subunit beta (NCBI) | compare |
| b0759 | galE | -1.9 | -6.3 | UDP-galactose-4-epimerase (VIMSS) | compare |
| b0145 | dksA | -1.9 | -4.0 | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein (NCBI) | compare |
| b0049 | apaH | -1.9 | -3.5 | diadenosinetetraphosphatase (NCBI) | compare |
| b0200 | gmhB | -1.9 | -1.3 | hypothetical protein (NCBI) | compare |
| b2572 | rseA | -1.8 | -3.7 | anti-sigma factor (NCBI) | compare |
| b3026 | qseC | -1.8 | -2.1 | sensory histidine kinase in two-component regulatory system with QseB (NCBI) | compare |
| b4676 | yoaK | -1.8 | -1.2 | expressed protein (RefSeq) | compare |
| b1861 | ruvA | -1.7 | -1.2 | Holliday junction DNA helicase motor protein (NCBI) | compare |
| b3791 | rffA | -1.7 | -8.0 | TDP-4-oxo-6-deoxy-D-glucose transaminase (NCBI) | compare |
| b1279 | yciS | -1.6 | -1.6 | conserved inner membrane protein (NCBI) | compare |
| b4451 | ryhB | -1.5 | -2.7 | Regulatory sRNA mediating positive Fur regulon response; requires Hfq for function; global iron regulator; degraded by RNase E when bound to target (RefSeq) | compare |
| b1604 | ydgH | -1.5 | -4.9 | hypothetical protein (NCBI) | compare |
| b0407 | yajC | -1.5 | -3.1 | preprotein translocase subunit YajC (NCBI) | compare |
| b3183 | obgE | -1.5 | -1.6 | GTPase involved in cell partioning and DNA repair (NCBI) | compare |
| b2188 | yejM | -1.5 | -8.0 | predicted hydrolase, inner membrane (NCBI) | compare |
| b3632 | rfaQ | -1.5 | -12.2 | lipopolysaccharide core biosynthesis protein (NCBI) | compare |
| b4701 | sokX | -1.4 | -1.2 | sok-related sRNA, function unknown (RefSeq) | compare |
| b4698 | mgrR | -1.4 | -3.4 | sRNA antisense regulator down regulates YgdQ and EptB, PhoPQ-regulated, Hfq-dependent; affects sensitivity to antimicrobial peptides (RefSeq) | compare |
| b1863 | ruvC | -1.4 | -2.1 | Holliday junction resolvase (NCBI) | compare |
| b0232 | yafN | -1.4 | -0.9 | predicted antitoxin of the YafO-YafN toxin-antitoxin system (NCBI) | compare |
| b3261 | fis | -1.4 | -1.3 | DNA-binding protein Fis (NCBI) | compare |
| b3842 | rfaH | -1.4 | -4.9 | transcriptional activator RfaH (NCBI) | compare |
| b1961 | dcm | -1.4 | -1.9 | DNA cytosine methylase (NCBI) | compare |
| b0683 | fur | -1.4 | -1.3 | ferric uptake regulator (NCBI) | compare |
| b3652 | recG | -1.3 | -7.7 | ATP-dependent DNA helicase (NCBI) | compare |
| b0450 | glnK | -1.3 | -3.2 | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB (NCBI) | compare |
| b3628 | rfaB | -1.3 | -6.9 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase (RefSeq) | compare |
| b0740 | tolB | -1.3 | -3.9 | translocation protein TolB precursor (NCBI) | compare |
| b2814 | metZ | -1.3 | -1.8 | tRNA-Met (NCBI) | compare |
| b1531 | marA | -1.2 | -2.6 | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | compare |
| b2175 | spr | -1.2 | -3.0 | predicted peptidase, outer membrane lipoprotein (NCBI) | compare |
| b3609 | secB | -1.2 | -3.3 | export protein SecB (NCBI) | compare |
| b0739 | tolA | -1.2 | -2.2 | cell envelope integrity inner membrane protein TolA (NCBI) | compare |
| b3627 | rfaI | -1.2 | -6.6 | UDP-D-galactose:(glucosyl)lipopolysaccharide- alpha-1,3-D-galactosyltransferase (NCBI) | compare |
| b3785 | wzzE | -1.2 | -7.7 | putative transport protein (VIMSS) | compare |
| b0738 | tolR | -1.2 | -1.5 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b2282 | nuoH | -1.1 | -2.5 | NADH dehydrogenase subunit H (NCBI) | compare |
| b2597 | yfiA | -1.1 | -2.2 | cold shock protein associated with 30S ribosomal subunit (NCBI) | compare |
| b0436 | tig | -1.1 | -5.8 | trigger factor (NCBI) | compare |
| b0741 | pal | -1.1 | -2.7 | peptidoglycan-associated outer membrane lipoprotein (NCBI) | compare |
| b1317 | ycjU | -1.1 | -3.1 | predicted beta-phosphoglucomutase (NCBI) | compare |
| b1712 | ihfA | -1.1 | -0.7 | integration host factor subunit alpha (NCBI) | compare |
| b1176 | minC | -1.1 | -2.9 | septum formation inhibitor (NCBI) | compare |
| b2279 | nuoK | -1.1 | -1.3 | NADH dehydrogenase subunit K (NCBI) | compare |
| b3630 | rfaP | -1.1 | -6.1 | kinase that phosphorylates core heptose of lipopolysaccharide (NCBI) | compare |
| b3784 | rfe | -1.1 | -8.5 | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase (NCBI) | compare |
| b1205 | ychH | -1.1 | -1.6 | predicted inner membrane protein (NCBI) | compare |
| b1831 | proQ | -1.1 | -2.0 | putative solute/DNA competence effector (NCBI) | compare |
| b1739 | osmE | -1.1 | -2.8 | DNA-binding transcriptional activator (NCBI) | compare |
| b0819 | ybiS | -1.0 | -5.5 | hypothetical protein (NCBI) | compare |
| b2830 | nudH | -1.0 | -1.1 | dinucleoside polyphosphate hydrolase (NCBI) | compare |
| b4596 | yciZ | -1.0 | -2.2 | hypothetical protein (RefSeq) | compare |
| b2215 | ompC | -1.0 | -5.9 | outer membrane porin protein C (NCBI) | compare |
| b3443 | yrhA | -1.0 | -1.6 | orf, hypothetical protein (VIMSS) | compare |
| b2642 | yfjW | -1.0 | -1.1 | CP4-57 prophage; predicted inner membrane protein (NCBI) | compare |
| b3811 | xerC | -1.0 | -1.3 | site-specific tyrosine recombinase XerC (NCBI) | compare |
| b1105 | ycfM | -1.0 | -3.4 | predicted outer membrane lipoprotein (NCBI) | compare |
| b1175 | minD | -1.0 | -3.8 | membrane ATPase of the MinC-MinD-MinE system (NCBI) | compare |
| b1195 | ymgE | -1.0 | -2.9 | predicted inner membrane protein (NCBI) | compare |
| b2288 | nuoA | -0.9 | -2.6 | NADH dehydrogenase I chain A (VIMSS) | compare |
| b1109 | ndh | -0.9 | -3.1 | respiratory NADH dehydrogenase 2/cupric reductase (NCBI) | compare |
| b4163 | glyV | -0.9 | -1.3 | tRNA-Gly (NCBI) | compare |
| b0018 | mokC | -0.9 | -1.4 | regulatory protein for HokC, overlaps CDS of hokC (NCBI) | compare |
| b4546 | ypeB | -0.8 | -1.3 | hypothetical protein (NCBI) | compare |
| b1671 | ydhX | -0.8 | -1.6 | predicted 4Fe-4S ferridoxin-type protein (RefSeq) | compare |
| b1185 | dsbB | -0.8 | -2.2 | reoxidizes DsbA protein following formation of disulfide bond in P-ring of flagella. (VIMSS) | compare |
| b0877 | ybjX | -0.8 | -3.6 | hypothetical protein (NCBI) | compare |
| b3786 | rffE | -0.8 | -6.1 | UDP-N-acetyl glucosamine-2-epimerase (NCBI) | compare |
| b0890 | ftsK | -0.8 | -2.1 | DNA-binding membrane protein required for chromosome resolution and partitioning (NCBI) | compare |
| b1235 | rssB | -0.8 | -4.0 | response regulator of RpoS (NCBI) | compare |
| b2571 | rseB | -0.8 | -3.6 | periplasmic negative regulator of sigmaE (NCBI) | compare |
| b3396 | mrcA | -0.8 | -7.0 | peptidoglycan synthetase; penicillin-binding protein 1A (VIMSS) | compare |
| b2325 | yfcL | -0.8 | -2.7 | hypothetical protein (NCBI) | compare |
| b1304 | pspA | -0.8 | -2.5 | regulatory protein for phage-shock-protein operon (NCBI) | compare |
| b3860 | dsbA | -0.8 | -5.0 | periplasmic protein disulfide isomerase I (NCBI) | compare |
| b1361 | ydaW | -0.8 | -0.5 | orf, hypothetical protein (VIMSS) | compare |
| b3147 | yraM | -0.8 | -6.0 | hypothetical protein (NCBI) | compare |
| b3933 | ftsN | -0.8 | -4.8 | essential cell division protein (NCBI) | compare |
| b0161 | degP | -0.7 | -4.5 | serine endoprotease (protease Do), membrane-associated (NCBI) | compare |
| b2058 | wcaB | -0.7 | -1.0 | predicted acyl transferase (NCBI) | compare |
| b1658 | purR | -0.7 | -3.6 | DNA-binding transcriptional repressor, hypoxanthine-binding (NCBI) | compare |
| b0357 | yaiN | -0.7 | -1.6 | putative alpha helix chain (VIMSS) | compare |
| b3250 | mreC | -0.7 | -1.3 | cell wall structural complex MreBCD transmembrane component MreC (NCBI) | compare |
| b3649 | rpoZ | -0.7 | -2.2 | DNA-directed RNA polymerase subunit omega (NCBI) | compare |
| b0471 | ybaB | -0.7 | -2.5 | hypothetical protein (NCBI) | compare |
| b4522 | yciX_1 | -0.7 | -1.5 | hypothetical protein (NCBI) | compare |
| b0097 | yacA | -0.7 | -1.5 | orf, hypothetical protein (VIMSS) | compare |
| b2209 | eco | -0.7 | -1.6 | ecotin precursor (NCBI) | compare |
| b4702 | mgtL | -0.7 | -1.3 | regulatory leader peptide for mgtA (NCBI) | compare |
| b3728 | pstS | -0.7 | -1.6 | phosphate transporter subunit (NCBI) | compare |
| b3787 | rffD | -0.7 | -4.6 | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) | compare |
| b4402 | yjjY | -0.7 | -0.9 | hypothetical protein (NCBI) | compare |
| b1618 | uidR | -0.7 | -2.4 | DNA-binding transcriptional repressor (NCBI) | compare |
| b0676 | nagC | -0.7 | -4.4 | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) | compare |
| b2064 | asmA | -0.7 | -3.8 | predicted assembly protein (NCBI) | compare |
| b2892 | recJ | -0.7 | -4.3 | ssDNA exonuclease, 5' --> 3'-specific (NCBI) | compare |
| b2287 | nuoB | -0.7 | -1.8 | NADH dehydrogenase subunit B (NCBI) | compare |
| b3726 | pstA | -0.7 | -2.8 | phosphate transporter subunit (NCBI) | compare |
| b4458 | oxyS | -0.7 | -1.3 | global regulatory RNA (NCBI) | compare |
| b2569 | lepA | -0.7 | -2.2 | GTP-binding protein LepA (NCBI) | compare |
| b2553 | glnB | -0.7 | -2.9 | regulatory protein P-II for glutamine synthetase (NCBI) | compare |
| b2822 | recC | -0.7 | -0.9 | exonuclease V (RecBCD complex), gamma chain (NCBI) | compare |
| b2286 | nuoC | -0.7 | -2.9 | NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) | compare |
| b1429 | tehA | -0.7 | -0.9 | potassium-tellurite ethidium and proflavin transporter (NCBI) | compare |
| b4480 | hdfR | -0.7 | -3.2 | transcriptional regulator HdfR (NCBI) | compare |
| b3778 | rep | -0.7 | -3.9 | DNA helicase and single-stranded DNA-dependent ATPase (NCBI) | compare |
| b4396 | rob | -0.6 | -4.6 | DNA-binding transcriptional activator (NCBI) | compare |
| b2576 | srmB | -0.6 | -1.9 | ATP-dependent RNA helicase (NCBI) | compare |
| b1284 | yciT | -0.6 | -2.3 | predicted DNA-binding transcriptional regulator (NCBI) | compare |
| b1278 | pgpB | -0.6 | -1.3 | phosphatidylglycerophosphatase B (NCBI) | compare |
| b0430 | cyoC | -0.6 | -2.4 | cytochrome o ubiquinol oxidase subunit III (NCBI) | compare |
| b4577 | sgrS | -0.6 | -1.6 | small antisense RNA (NCBI) | compare |
| b1266 | yciV | -0.6 | -2.0 | hypothetical protein (NCBI) | compare |
| b2011 | sbcB | -0.6 | -3.5 | exonuclease I (NCBI) | compare |
| b2819 | recD | -0.6 | -3.3 | exonuclease V (RecBCD complex), alpha chain (NCBI) | compare |
| b1763 | topB | -0.6 | -1.7 | DNA topoisomerase III (NCBI) | compare |
| b1524 | yneH | -0.6 | -0.7 | predicted glutaminase (NCBI) | compare |
| b4535 | yniD | -0.6 | -0.7 | predicted protein (RefSeq) | compare |
| b3387 | dam | -0.6 | -4.8 | DNA adenine methylase (NCBI) | compare |
| b1778 | yeaA | -0.6 | -1.1 | methionine sulfoxide reductase B (NCBI) | compare |
| b2650 | ypjC | -0.6 | -0.4 | hypothetical protein (RefSeq) | compare |
| b1438 | ydcQ | -0.6 | -1.8 | predicted DNA-binding transcriptional regulator (RefSeq) | compare |
| b4100 | phnH | -0.6 | -2.5 | carbon-phosphorus lyase complex subunit (NCBI) | compare |
| b3389 | aroB | -0.6 | -4.3 | 3-dehydroquinate synthase (NCBI) | compare |
| b0406 | tgt | -0.6 | -2.8 | queuine tRNA-ribosyltransferase (NCBI) | compare |
| b2363 | yfdT | -0.6 | -1.2 | CPS-53 (KpLE1) prophage; predicted protein (NCBI) | compare |
| b1693 | aroD | -0.6 | -2.9 | 3-dehydroquinate dehydratase (NCBI) | compare |
| b2476 | purC | -0.6 | -2.1 | phosphoribosylaminoimidazole-succinocarboxamidesynthase (NCBI) | compare |
| b1569 | dicC | -0.6 | -1.7 | Qin prophage; DNA-binding transcriptional regulator for DicB (NCBI) | compare |
| b4573 | insZ | -0.6 | -1.9 | no description | compare |
| b3839 | tatC | -0.6 | -3.1 | TatABCE protein translocation system subunit (NCBI) | compare |
| b2221 | atoD | -0.6 | -2.2 | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit (NCBI) | compare |
| b1074 | flgC | -0.6 | -0.8 | flagellar basal-body rod protein C (NCBI) | compare |
| b1643 | ydhI | -0.6 | -2.0 | predicted inner membrane protein (NCBI) | compare |
| b1227 | narI | -0.6 | -2.3 | nitrate reductase 1, gamma (cytochrome b(NR)) subunit (NCBI) | compare |
| b0737 | tolQ | -0.6 | -1.0 | membrane spanning protein in TolA-TolQ-TolR complex (NCBI) | compare |
| b3931 | hslU | -0.6 | -4.3 | ATP-dependent protease ATP-binding subunit (NCBI) | compare |
| b1757 | b1757 | -0.6 | -2.5 | putative thiosulfate sulfur transferase (VIMSS) | compare |
| b0441 | ppiD | -0.6 | -4.4 | peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) | compare |
| b4695 | ykgT | -0.6 | -0.9 | no description | compare |
| b0843 | ybjH | -0.5 | -1.0 | hypothetical protein (NCBI) | compare |
| b3094 | exuR | -0.5 | -2.3 | negative regulator of exu regulon, exuT, uxaAC, and uxuB (VIMSS) | compare |
| b3764 | yifE | -0.5 | -2.4 | hypothetical protein (NCBI) | compare |
| b3813 | uvrD | -0.5 | -4.3 | DNA-dependent ATPase I and helicase II (NCBI) | compare |
| b1370 | insH-5 | -0.5 | -1.2 | Rac prophage; IS5 transposase and trans-activator (NCBI) | compare |
| b4062 | soxS | -0.5 | -2.3 | DNA-binding transcriptional dual regulator (NCBI) | compare |
| b0853 | ybjN | -0.5 | -2.1 | predicted oxidoreductase (NCBI) | compare |
| b1612 | fumA | -0.5 | -1.8 | fumarate hydratase (fumarase A), aerobic Class I (NCBI) | compare |
| b0550 | rusA | -0.5 | -1.4 | DLP12 prophage; endonuclease RUS (NCBI) | compare |
| b1259 | yciG | -0.5 | -0.9 | orf, hypothetical protein (VIMSS) | compare |
| b2998 | yghW | -0.5 | -2.2 | hypothetical protein (NCBI) | compare |
| b0611 | rna | -0.5 | -2.5 | ribonuclease I (NCBI) | compare |
| b0484 | copA | -0.5 | -4.0 | copper transporter (NCBI) | compare |
| b2424 | cysU | -0.5 | -1.1 | sulfate/thiosulfate transporter subunit (NCBI) | compare |
| b2584 | yfiQ | -0.5 | -4.0 | fused predicted acyl-CoA synthetase: NAD(P)-binding subunit/ATP-binding subunit (NCBI) | compare |
| b3149 | yraO | -0.5 | -2.5 | DnaA initiator-associating factor for replication initiation (NCBI) | compare |