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Experiment set12IT023 for
Pseudomonas putida KT2440
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L-Lysine carbon source
Genes with
specific
phenotypes:
gene
name
fitness
t score
description
PP
_5260
-6.1
-10.2
2-oxoadipate decarboxylase/hydroxylase (2-hydroxyglutarate synthase)
(from data)
conserved
PP
_5257
-6.0
-13.9
L-pipecolate oxidase
conserved
PP
_3596
-5.6
-10.1
D-lysine oxidase
compare
PP
_0383
-5.5
-14.7
Lysine 2-monooxygenase
conserved
PP
_3593
-5.3
-11.4
L-lysine and D-lysine ABC transporter, substrate-binding component
(from data)
compare
PP
_3592
-5.3
-11.7
Transcriptional regulator, RpiR family
compare
PP
_2910
-5.2
-12.4
L-2-hydroxyglutarate oxidase
compare
PP
_5258
-5.1
-9.1
L-piperidine-6-carboxylate dehydrogenase
conserved
PP
_0384
-5.1
-9.4
Transcriptional regulator, AsnC family
conserved
PP
_4493
-4.7
-16.1
D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39)
(from data)
compare
PP
_3594
-4.5
-7.4
L-lysine and D-lysine ABC transporter, permease component 1
(from data)
conserved
PP
_3591
-4.3
-6.5
Delta 1-piperideine-2-carboxylate reductase
compare
PP
_3597
-3.9
-5.4
L-lysine and D-lysine ABC transporter, ATPase component
(from data)
compare
PP
_0382
-3.7
-9.4
5-aminopentanamidase
conserved
PP
_3595
-3.6
-8.9
L-lysine and D-lysine ABC transporter, permease component 2
(from data)
conserved
PP
_0213
-3.4
-7.4
succinate-semialdehyde dehydrogenase (NADP+)
compare
Specific phenotypes for carbon source L-Lysine across organisms