Experiment set12IT019 for Agrobacterium fabrum C58

Compare to:

LB_Tomato_Leaf

200 most important genes:

  gene name fitness t score description  
Atu0486 -3.0 -6.9 dihydroorotate dehydrogenase compare
Atu2125 -2.6 -2.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu0399 -2.5 -6.8 dihydroorotase compare
Atu0298 -2.2 -5.8 orotidine 5 compare
Atu2439 -2.1 -2.1 hypothetical protein compare
Atu0971 -1.9 -3.7 two component sensor kinase compare
Atu3763 -1.8 -1.7 hypothetical protein compare
Atu3469 -1.7 -3.5 phosphoglyceromutase compare
Atu4317 -1.7 -3.1 TetR family transcriptional regulator compare
Atu6036 -1.7 -1.2 entry-exclusion protein compare
Atu1030 -1.6 -1.8 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu4773 -1.6 -2.9 two component response regulator compare
Atu2640 -1.6 -3.4 hypothetical protein compare
Atu1307 -1.5 -5.3 dihydroorotase compare
Atu0659 -1.5 -5.3 NTP pyrophosphohydrolase, MutT family compare
Atu0331 -1.5 -1.7 sigma-54 modulation protein compare
Atu0141 -1.5 -1.6 cytochrome O ubiquinol oxidase subunit I compare
Atu2554 -1.4 -2.8 lysyl-tRNA synthetase compare
Atu3739 -1.4 -1.9 phosphoglycerate kinase compare
Atu1447 -1.4 -1.9 two component sensor kinase compare
Atu0769 -1.4 -1.6 protoheme IX farnesyltransferase compare
Atu0189 -1.3 -2.8 ABC transporter, membrane spanning protein (peptide) compare
Atu5164 -1.3 -1.1 type IV secretion protein AvhB3 compare
Atu4072 -1.2 -1.9 nodulation protein N compare
Atu0184 -1.2 -1.9 glucokinase compare
Atu2207 -1.1 -2.7 two component sensor kinase compare
Atu0031 -1.1 -1.3 PTS system, IIA component compare
Atu1364 -1.1 -4.1 ATP-dependent Clp protease, ATP-binding subunit compare
Atu2555 -1.1 -2.4 L-lysine 2,3-aminomutase compare
Atu1513 -1.1 -4.2 ABC excinuclease subunit A compare
Atu3759 -1.1 -1.4 hypothetical protein compare
Atu0894 -1.1 -1.8 ABC transporter, membrane spanning protein compare
Atu3730 -1.0 -0.9 hypothetical protein compare
Atu1446 -1.0 -1.3 two component response regulator compare
Atu0142 -1.0 -2.2 cytochrome o ubiquinol oxidase subunit II compare
Atu0086 -1.0 -1.2 ribosome-binding factor A compare
Atu2249 -1.0 -1.2 hypothetical protein compare
Atu8161 -1.0 -1.5 hypothetical protein compare
Atu2824 -1.0 -3.5 hypothetical protein compare
Atu0658 -1.0 -6.1 phosphate permease compare
Atu1714 -1.0 -1.5 exonuclease III compare
Atu2057 -1.0 -2.1 DNA helicase II compare
Atu1359 -1.0 -1.0 dnaK deletion suppressor protein compare
Atu3740 -0.9 -5.0 fructose bisphosphate aldolase compare
Atu0876 -0.9 -1.6 superoxide dismutase compare
Atu2067 -0.9 -1.0 hypothetical protein compare
Atu4099 -0.9 -3.4 hypothetical protein compare
Atu1620 -0.9 -4.9 triosephosphate isomerase compare
Atu0030 -0.9 -1.3 phosphocarrier protein HPr compare
Atu0361 -0.9 -1.7 transcriptional regulator compare
Atu0947 -0.9 -3.2 transcriptional regulator, AsnC family compare
Atu0421 -0.8 -1.2 ABC transporter, membrane spanning protein compare
Atu1739 -0.8 -3.0 permease compare
Atu0025 -0.8 -1.4 hypothetical protein compare
Atu8167 -0.8 -5.2 putative transmembrane protein compare
Atu3480 -0.8 -4.4 hydroxymethylglutaryl-CoA lyase compare
Atu2650 -0.8 -5.6 glycerol-3-phosphate dehydrogenase compare
Atu0690 -0.8 -1.6 hypothetical protein compare
Atu1308 -0.8 -3.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0400 -0.8 -1.6 orotate phosphoribosyltransferase compare
Atu1163 -0.8 -1.5 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3031 -0.8 -1.7 hypothetical protein compare
Atu4514 -0.8 -2.8 RpiR family transcriptional regulator compare
Atu0043 -0.8 -1.3 imidazoleglycerol-phosphate dehydratase compare
Atu1810 -0.8 -0.7 hypothetical protein compare
Atu2799 -0.8 -2.0 precorrin-6x reductase compare
Atu3733 -0.8 -2.0 hypothetical protein compare
Atu0434 -0.7 -1.4 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu2796 -0.7 -4.1 precorrin-4 C11-methyltransferase compare
Atu2433 -0.7 -1.0 hypothetical protein compare
Atu8035 -0.7 -0.7 hypothetical protein compare
Atu1847 -0.7 -1.4 hypothetical protein compare
Atu2115 -0.7 -4.2 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu3963 -0.7 -3.9 GntR family transcriptional regulator compare
Atu4226 -0.7 -4.8 transcriptional regulator compare
Atu0062 -0.7 -3.5 transcriptional regulator, ROK family compare
Atu0041 -0.7 -1.1 glutamine amidotransferase compare
Atu4541 -0.7 -3.4 carboxymuconolactone decarboxylase compare
Atu2127 -0.7 -4.1 L-carnitine dehydratase compare
Atu0354 -0.7 -0.8 ferric uptake regulator compare
Atu1031 -0.7 -2.4 hypothetical protein compare
Atu1495 -0.7 -1.7 hypothetical protein compare
Atu0237 -0.7 -2.1 hypothetical protein compare
Atu2616 -0.7 -2.7 hypothetical protein compare
Atu2578 -0.7 -2.5 cAMP-dependent protein kinase regulatory subunit compare
Atu3608 -0.7 -2.6 hypothetical protein compare
Atu4148 -0.6 -3.0 UDP-glucuronic acid epimerase compare
Atu2344 -0.6 -1.8 lactoylglutathione lyase compare
Atu2722 -0.6 -2.4 porin compare
Atu4173 -0.6 -1.5 phosphoenolpyruvate-protein phosphotransferase compare
Atu4125 -0.6 -3.3 branched chain amino acid ABC transporter ATPase compare
Atu4418 -0.6 -3.2 glutaryl-CoA dehydrogenase compare
Atu2141 -0.6 -2.1 hypothetical protein compare
Atu3835 -0.6 -2.9 hypothetical protein compare
Atu0149 -0.6 -2.0 enoyl-(acyl-carrier-protein) reductase compare
Atu1850 -0.6 -2.3 phosphoribosylformylglycinamidine synthetase II compare
Atu3479 -0.6 -4.2 3-methylcrotonyl-CoA carboxylase subunit alpha compare
Atu3754 -0.6 -2.5 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu3478 -0.6 -4.1 3-methylcrotonoyl-CoA carboxylase beta subunit compare
Atu3744 -0.6 -4.0 ABC transporter permease compare
Atu4446 -0.6 -4.8 hypothetical protein compare
Atu3579 -0.6 -2.5 lactoylglutathione lyase compare
Atu5146 -0.6 -1.5 hypothetical protein compare
Atu2484 -0.6 -1.1 hypothetical protein compare
Atu4234 -0.6 -3.2 amino acid ABC transporter permease compare
Atu3009 -0.6 -1.0 exopolysaccharide production protein compare
Atu0602 -0.6 -3.6 glutamine synthetase compare
Atu3467 -0.6 -1.9 hypothetical protein compare
Atu3400 -0.6 -2.9 hypothetical protein compare
Atu4077 -0.6 -3.7 glycogen branching protein compare
Atu6108 -0.6 -2.1 alkylphosphonate uptake protein compare
Atu3798 -0.6 -3.0 TetR family transcriptional regulator compare
Atu0230 -0.6 -1.1 hypothetical protein compare
Atu2217 -0.6 -2.2 hypothetical protein compare
Atu2832 -0.6 -2.1 tRNA modification GTPase compare
Atu1760 -0.6 -0.8 hypothetical protein compare
Atu0977 -0.6 -2.3 serine protease DO-like protease compare
Atu0923 -0.6 -2.6 hypothetical protein compare
Atu0498 -0.6 -3.4 hypothetical protein compare
Atu1535 -0.6 -1.2 cytochrome c oxidase, FixQ chain compare
Atu0784 -0.6 -1.6 hypothetical protein compare
Atu0185 -0.6 -1.3 methylglyoxal synthase compare
Atu0322 -0.6 -1.9 enoyl CoA hydratase compare
Atu2532 -0.5 -2.0 transcriptional regulator, MarR family compare
Atu1127 -0.5 -1.5 molybdopterin converting factor small subunit compare
Atu1415 -0.5 -2.2 3-hydroxyacyl-CoA dehydrogenase type II compare
Atu1490 -0.5 -1.4 arsenate reductase compare
Atu4882 -0.5 -1.3 hypothetical protein compare
Atu1683 -0.5 -0.9 hypothetical protein compare
Atu1075 -0.5 -2.6 amidophosphoribosyltransferase compare
Atu4129 -0.5 -2.5 3-hydroxyisobutyrate dehydrogenase compare
Atu3012 -0.5 -1.3 hypothetical protein compare
Atu2809 -0.5 -3.4 cobalamin biosynthesis protein compare
Atu3757 -0.5 -1.8 hypothetical protein compare
Atu2286 -0.5 -0.9 hypothetical protein compare
Atu0039 -0.5 -0.6 imidazoleglycerol-phosphate synthase cyclase compare
Atu1971 -0.5 -2.1 hypothetical protein compare
Atu4346 -0.5 -2.5 hypothetical protein compare
Atu2113 -0.5 -1.1 N-acetylmuramoyl-L-alanine amidase compare
Atu0085 -0.5 -1.4 tRNA pseudouridine 55 synthase compare
Atu1039 -0.5 -2.0 DNA repair protein RecO compare
Atu3505 -0.5 -3.2 3-hydroxyisobutyryl-CoA hydrolase compare
Atu1038 -0.5 -1.5 two component response regulator compare
Atu3721 -0.5 -1.7 hypothetical protein compare
Atu4743 -0.5 -2.5 LacI family transcriptional regulator compare
Atu2692 -0.5 -1.8 intracellular septation protein compare
Atu1204 -0.5 -2.4 potassium uptake protein compare
Atu2792 -0.5 -2.9 hypothetical protein compare
Atu6195 -0.5 -1.7 conserved hypothetical protein compare
Atu0893 -0.5 -1.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu1680 -0.5 -2.6 peptidyl prolyl cis-trans isomerase compare
Atu0201 -0.5 -1.1 hypothetical protein compare
Atu3160 -0.5 -2.0 hypothetical protein compare
Atu3392 -0.5 -2.0 methyltransferase compare
Atu2267 -0.5 -1.9 hypothetical protein compare
Atu1534 -0.5 -2.8 cytochrome-c oxidase, FixP chain compare
Atu2478 -0.5 -1.5 hypothetical protein compare
Atu2436 -0.5 -1.8 hypothetical protein compare
Atu1737 -0.5 -1.5 hypothetical protein compare
Atu1528 -0.5 -3.5 nitrogen fixation protein FixI compare
Atu0662 -0.5 -1.7 transcriptional regulator, GntR family compare
Atu0531 -0.5 -2.5 hypothetical protein compare
Atu3249 -0.5 -3.5 septum formation inhibitor compare
Atu0079 -0.5 -2.3 Atu0079-1 mutant of pfkB family carbohydrate kinase compare
Atu1258 -0.5 -2.2 ATP-dependent Clp protease, proteolytic subunit compare
Atu2335 -0.5 -1.1 hypothetical protein compare
Atu0981 -0.5 -3.2 glutamate-ammonia-ligase adenylyltransferase compare
Atu1417 -0.5 -2.5 enoyl-CoA hydratase compare
Atu0036 -0.5 -0.8 hypothetical protein compare
Atu2807 -0.5 -2.1 cob(I)alamin adenosyltransferase compare
Atu2184 -0.5 -1.9 transcriptional regulator, AsnC family compare
Atu4685 -0.5 -2.8 LacI family transcriptional regulator compare
Atu1588 -0.5 -2.6 homoserine dehydrogenase compare
Atu2831 -0.5 -2.3 glucose inhibited division protein A compare
Atu2452 -0.5 -1.4 hypothetical protein compare
Atu3486 -0.5 -1.6 DeoR family transcriptional regulator compare
Atu1838 -0.5 -1.6 ABC transporter, substrate binding protein (amino acid) compare
Atu2239 -0.5 -1.6 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3162 -0.5 -3.5 LacI family transcriptional regulator compare
Atu3496 -0.5 -1.1 hypothetical protein compare
Atu3775 -0.5 -1.6 hypothetical protein compare
Atu0749 -0.5 -1.6 biotin synthesis BioY protein compare
Atu1005 -0.5 -1.6 hypothetical protein compare
Atu5430 -0.5 -0.5 hypothetical protein compare
Atu1380 -0.5 -2.9 zinc metallopeptidase compare
Atu4149 -0.4 -3.1 UDP-glucose 6-dehydrogenase compare
Atu0671 -0.4 -1.8 hypothetical protein compare
Atu4153 -0.4 -2.8 aldehyde dehydrogenase compare
Atu0510 -0.4 -2.7 pH adaption potassium efflux system protein compare
Atu3582 -0.4 -1.7 hypothetical protein compare
Atu1418 -0.4 -2.1 methylenetetrahydrofolate reductase compare
Atu3258 -0.4 -2.7 hypothetical protein compare
Atu2043 -0.4 -2.6 htrA family protein compare
Atu1469 -0.4 -1.3 hypothetical protein compare
Atu4238 -0.4 -1.5 hydrolase compare
Atu2204 -0.4 -0.7 hypothetical protein compare
Atu4157 -0.4 -3.6 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase compare
Atu2795 -0.4 -2.4 cobalamin biosynthetic protein compare
Atu1057 -0.4 -2.0 ADP-Ribose Pyrophosphatase compare
Atu1387 -0.4 -0.8 transcriptional regulator, GntR family compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_tomato_leaf experiments

For lb_tomato_leaf Tomato_Leaf across organisms