Experiment set12IT017 for Agrobacterium fabrum C58

Compare to:

LB_Tomato_Leaf

200 most important genes:

  gene name fitness t score description  
Atu1359 -3.2 -1.9 dnaK deletion suppressor protein compare
Atu0486 -2.8 -6.1 dihydroorotate dehydrogenase compare
Atu0030 -2.1 -2.3 phosphocarrier protein HPr compare
Atu0399 -2.0 -6.2 dihydroorotase compare
Atu1030 -1.9 -2.1 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu0141 -1.8 -1.9 cytochrome O ubiquinol oxidase subunit I compare
Atu2439 -1.8 -1.1 hypothetical protein compare
Atu2684 -1.6 -2.1 hypothetical protein compare
Atu0894 -1.5 -2.1 ABC transporter, membrane spanning protein compare
Atu0971 -1.4 -3.3 two component sensor kinase compare
Atu3469 -1.4 -2.4 phosphoglyceromutase compare
Atu0298 -1.4 -4.9 orotidine 5 compare
Atu0723 -1.4 -2.0 FAD dependent oxidoreductase compare
Atu1307 -1.4 -3.4 dihydroorotase compare
Atu6098 -1.3 -1.2 transcriptional regulator, HTH family compare
Atu0086 -1.3 -1.4 ribosome-binding factor A compare
Atu1308 -1.3 -2.9 aspartate carbamoyl transferase catalytic subunit compare
Atu3763 -1.3 -1.2 hypothetical protein compare
Atu0354 -1.2 -2.1 ferric uptake regulator compare
Atu1163 -1.2 -1.1 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3008 -1.2 -1.1 hypothetical protein compare
Atu1447 -1.2 -1.5 two component sensor kinase compare
Atu2125 -1.2 -1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu2824 -1.1 -2.9 hypothetical protein compare
Atu2207 -1.1 -2.3 two component sensor kinase compare
Atu0659 -1.1 -4.8 NTP pyrophosphohydrolase, MutT family compare
Atu3750 -1.1 -2.9 thiamine-phosphate pyrophosphorylase compare
Atu0893 -1.1 -3.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu8023 -1.1 -2.5 hypothetical protein compare
Atu2067 -1.1 -1.2 hypothetical protein compare
Atu2640 -1.1 -4.1 hypothetical protein compare
Atu4173 -1.1 -2.2 phosphoenolpyruvate-protein phosphotransferase compare
Atu1677 -1.0 -4.2 queuine tRNA-ribosyltransferase compare
Atu0142 -1.0 -3.0 cytochrome o ubiquinol oxidase subunit II compare
Atu0784 -1.0 -2.3 hypothetical protein compare
Atu0400 -1.0 -2.2 orotate phosphoribosyltransferase compare
Atu1495 -1.0 -3.0 hypothetical protein compare
Atu2555 -0.9 -3.2 L-lysine 2,3-aminomutase compare
Atu2249 -0.9 -1.1 hypothetical protein compare
Atu0331 -0.9 -2.1 sigma-54 modulation protein compare
Atu0846 -0.9 -2.8 transcriptional regulator, MarR family compare
Atu1779 -0.9 -2.0 hypothetical protein compare
Atu3730 -0.9 -1.0 hypothetical protein compare
Atu8138 -0.9 -1.6 hypothetical protein compare
Atu3017 -0.8 -1.1 phosphoglyceromutase compare
Atu1141 -0.8 -3.4 Phosphoribosylglycinamide synthetase compare
Atu1685 -0.8 -1.0 hypothetical protein compare
Atu1620 -0.8 -4.8 triosephosphate isomerase compare
Atu2728 -0.8 -2.1 beta (1-->2) glucan export ATP-binding protein compare
Atu8167 -0.8 -5.2 putative transmembrane protein compare
Atu0039 -0.8 -1.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu0040 -0.8 -0.9 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu3486 -0.8 -2.0 DeoR family transcriptional regulator compare
Atu3754 -0.8 -3.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2799 -0.8 -2.8 precorrin-6x reductase compare
Atu1810 -0.8 -0.9 hypothetical protein compare
Atu4418 -0.7 -3.4 glutaryl-CoA dehydrogenase compare
Atu4317 -0.7 -1.4 TetR family transcriptional regulator compare
Atu2057 -0.7 -1.6 DNA helicase II compare
Atu4374 -0.7 -2.6 hypothetical protein compare
Atu0658 -0.7 -5.1 phosphate permease compare
Atu4148 -0.7 -3.3 UDP-glucuronic acid epimerase compare
Atu8161 -0.7 -1.3 hypothetical protein compare
Atu1513 -0.7 -3.0 ABC excinuclease subunit A compare
Atu1076 -0.7 -2.1 colicin V production protein compare
Atu0043 -0.7 -1.9 imidazoleglycerol-phosphate dehydratase compare
Atu2462 -0.7 -1.4 hypothetical protein compare
Atu1774 -0.7 -3.9 ABC transporter, substrate binding protein (peptide) compare
Atu1446 -0.7 -1.3 two component response regulator compare
Atu0895 -0.7 -2.0 ABC transporter, substrate binding protein compare
Atu2831 -0.7 -2.6 glucose inhibited division protein A compare
Atu1701 -0.6 -1.4 protein-L-isoaspartate O-methyltransferase compare
Atu8035 -0.6 -1.4 hypothetical protein compare
Atu3162 -0.6 -4.3 LacI family transcriptional regulator compare
Atu1327 -0.6 -1.9 NADH-ubiquinone oxidoreductase compare
Atu4873 -0.6 -3.5 TetR family transcriptional regulator compare
Atu3608 -0.6 -2.4 hypothetical protein compare
Atu4671 -0.6 -2.1 response regulator compare
Atu2809 -0.6 -4.2 cobalamin biosynthesis protein compare
Atu4099 -0.6 -2.5 hypothetical protein compare
Atu5513 -0.6 -1.1 cold shock protein compare
Atu2286 -0.6 -1.2 hypothetical protein compare
Atu5057 -0.6 -0.6 hypothetical protein compare
Atu3034 -0.6 -3.4 ROK family transcriptional regulator compare
Atu1364 -0.6 -2.6 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1588 -0.6 -3.4 homoserine dehydrogenase compare
Atu3603 -0.6 -1.5 two component response regulator compare
Atu2650 -0.6 -3.9 glycerol-3-phosphate dehydrogenase compare
Atu0977 -0.6 -1.8 serine protease DO-like protease compare
Atu1254 -0.6 -1.4 transcriptional regulator, ArsR family compare
Atu0153 -0.6 -2.3 transcriptional regulator, Fur family compare
Atu0923 -0.6 -2.6 hypothetical protein compare
Atu4870 -0.6 -3.9 NADP-dependent quinone oxidoreductase compare
Atu1847 -0.6 -1.4 hypothetical protein compare
Atu1417 -0.6 -3.5 enoyl-CoA hydratase compare
Atu2051 -0.6 -2.2 hypothetical protein compare
Atu1110 -0.6 -1.7 cytosol aminopeptidase compare
Atu1140 -0.5 -2.7 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu4887 -0.5 -1.7 hypothetical protein compare
Atu1535 -0.5 -1.1 cytochrome c oxidase, FixQ chain compare
Atu4161 -0.5 -1.0 hypothetical protein compare
Atu2616 -0.5 -2.5 hypothetical protein compare
Atu3572 -0.5 -3.1 transcriptional regulator compare
Atu4139 -0.5 -1.6 hypothetical protein compare
Atu3740 -0.5 -3.1 fructose bisphosphate aldolase compare
Atu0499 -0.5 -2.7 hypothetical protein compare
Atu8012 -0.5 -1.1 hypothetical protein compare
Atu0769 -0.5 -0.7 protoheme IX farnesyltransferase compare
Atu3485 -0.5 -3.5 short chain dehydrogenase compare
Atu3015 -0.5 -2.0 hypothetical protein compare
Atu0361 -0.5 -1.2 transcriptional regulator compare
Atu5540 -0.5 -0.7 hypothetical protein compare
Atu2235 -0.5 -1.3 hypothetical protein compare
Atu1021 -0.5 -1.2 outer membrane protein compare
Atu1645 -0.5 -2.9 ABC transporter, substrate binding protein compare
Atu2115 -0.5 -3.1 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu8053 -0.5 -1.8 hypothetical protein compare
Atu2808 -0.5 -2.9 cobyric acid synthase compare
Atu2184 -0.5 -2.5 transcriptional regulator, AsnC family compare
Atu1904 -0.5 -2.7 transcriptional regulator compare
Atu1075 -0.5 -2.3 amidophosphoribosyltransferase compare
Atu4407 -0.5 -1.2 periplasmic nitrate reductase, NapD protein compare
Atu1427 -0.5 -1.3 hypothetical protein compare
Atu0638 -0.5 -1.2 hypothetical protein compare
Atu4072 -0.5 -1.0 nodulation protein N compare
Atu2675 -0.5 -1.6 hypothetical protein compare
Atu1793 -0.5 -2.9 phosphatidylcholine synthase compare
Atu3963 -0.5 -2.8 GntR family transcriptional regulator compare
Atu5125 -0.5 -2.5 GntR family transcriptional regulator compare
Atu1131 -0.5 -2.3 outer membrane protein compare
Atu0598 -0.5 -2.4 phosphogluconate dehydratase compare
Atu3707 -0.5 -1.1 phosphoserine aminotransferase compare
Atu0647 -0.5 -1.7 phosphoribosylamine--glycine ligase compare
Atu0036 -0.5 -1.0 hypothetical protein compare
Atu0922 -0.5 -2.4 hypothetical protein compare
Atu0130 -0.5 -1.2 cytidine deaminase compare
Atu3479 -0.5 -2.8 3-methylcrotonyl-CoA carboxylase subunit alpha compare
Atu2821 -0.5 -2.1 transcriptional regulator, GntR family compare
Atu1680 -0.5 -2.2 peptidyl prolyl cis-trans isomerase compare
Atu2804 -0.5 -3.1 cobaltochelatase subunit compare
Atu2554 -0.5 -0.5 lysyl-tRNA synthetase compare
Atu0422 -0.5 -0.8 ABC transporter, membrane spanning protein compare
Atu0368 -0.4 -2.0 tRNA pseudouridine synthase I compare
Atu0184 -0.4 -1.3 glucokinase compare
Atu2795 -0.4 -2.1 cobalamin biosynthetic protein compare
Atu1683 -0.4 -1.0 hypothetical protein compare
Atu2722 -0.4 -2.7 porin compare
Atu3739 -0.4 -1.0 phosphoglycerate kinase compare
Atu4616 -0.4 -1.0 dTDP-4-dehydrorhamnose reductase compare
Atu8089 -0.4 -1.9 hypothetical protein compare
Atu4881 -0.4 -1.9 hypothetical protein compare
Atu2396 -0.4 -1.7 urease accessory protein compare
Atu3911 -0.4 -1.1 hypothetical protein compare
Atu3264 -0.4 -2.0 IclR family transcriptional regulator compare
Atu1032 -0.4 -1.9 hypothetical protein compare
Atu0038 -0.4 -2.2 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0051 -0.4 -1.9 two component sensor kinase compare
Atu2584 -0.4 -1.7 hypothetical protein compare
Atu0190 -0.4 -2.0 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu6114 -0.4 -1.4 hypothetical protein compare
Atu4869 -0.4 -1.8 hypothetical protein compare
Atu2802 -0.4 -2.0 precorrin-8X methylmutase compare
Atu1678 -0.4 -2.0 S-adenosylmethionine tRNA ribosyltransferase-isomerase compare
Atu0050 -0.4 -1.6 two component response regulator compare
Atu0031 -0.4 -0.6 PTS system, IIA component compare
Atu0119 -0.4 -0.6 hypothetical protein compare
Atu0210 -0.4 -1.7 hypothetical protein compare
Atu2239 -0.4 -1.8 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu3024 -0.4 -3.2 sugar ABC transporter permease compare
Atu0876 -0.4 -0.7 superoxide dismutase compare
Atu3392 -0.4 -1.7 methyltransferase compare
Atu2380 -0.4 -1.2 hypothetical protein compare
Atu4877 -0.4 -3.2 short-chain dehydrogenase compare
Atu1182 -0.4 -1.0 hypothetical protein compare
Atu2832 -0.4 -1.8 tRNA modification GTPase compare
Atu2232 -0.4 -1.8 ATP-dependent Clp protease adaptor protein ClpS compare
Atu0976 -0.4 -0.8 cycL protein compare
Atu4226 -0.4 -2.4 transcriptional regulator compare
Atu2026 -0.4 -2.3 exodeoxyribonuclease V compare
Atu3018 -0.4 -1.8 hypothetical protein compare
Atu3144 -0.4 -1.7 GntR family transcriptional regulator compare
Atu5451 -0.4 -0.6 hypothetical protein compare
Atu2796 -0.4 -2.0 precorrin-4 C11-methyltransferase compare
Atu2001 -0.4 -2.4 excinuclease ABC subunit B compare
Atu0498 -0.4 -2.2 hypothetical protein compare
Atu2259 -0.4 -2.2 MFS permease compare
Atu0485 -0.4 -1.3 hypothetical protein compare
Atu3028 -0.4 -2.4 hypothetical protein compare
Atu3755 -0.4 -1.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2271 -0.4 -2.2 urease accessory protein compare
Atu1258 -0.4 -2.2 ATP-dependent Clp protease, proteolytic subunit compare
Atu0277 -0.4 -1.8 hypothetical protein compare
Atu4153 -0.4 -2.6 aldehyde dehydrogenase compare
Atu1565 -0.4 -1.5 serine acetyltransferase compare
Atu0135 -0.4 -1.4 uracil phosphoribosyltransferase compare
Atu3019 -0.4 -2.5 hypothetical protein compare
Atu0115 -0.4 -0.5 hypothetical protein compare
Atu8174 -0.4 -2.5 hypothetical protein compare
Atu2798 -0.4 -1.3 precorrin-6y methyltransferase compare
Atu2793 -0.4 -2.0 cobyrinic acid a,c-diamide synthase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_tomato_leaf experiments

For lb_tomato_leaf Tomato_Leaf across organisms