Experiment set12IT013 for Agrobacterium fabrum C58

Compare to:

LB_Lettuce_Leaf

200 most important genes:

  gene name fitness t score description  
Atu0769 -3.5 -3.4 protoheme IX farnesyltransferase compare
Atu3763 -3.3 -2.2 hypothetical protein compare
Atu3469 -3.2 -4.3 phosphoglyceromutase compare
Atu0331 -2.7 -4.1 sigma-54 modulation protein compare
Atu0399 -2.2 -6.3 dihydroorotase compare
Atu2057 -2.1 -2.7 DNA helicase II compare
Atu4317 -2.1 -3.8 TetR family transcriptional regulator compare
Atu0486 -1.7 -4.8 dihydroorotate dehydrogenase compare
Atu1030 -1.6 -2.5 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu3739 -1.5 -2.9 phosphoglycerate kinase compare
Atu2554 -1.5 -2.7 lysyl-tRNA synthetase compare
Atu1163 -1.5 -1.8 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0030 -1.4 -2.0 phosphocarrier protein HPr compare
Atu2207 -1.4 -1.6 two component sensor kinase compare
Atu0400 -1.4 -2.8 orotate phosphoribosyltransferase compare
Atu2640 -1.4 -4.3 hypothetical protein compare
Atu0971 -1.4 -3.7 two component sensor kinase compare
Atu1364 -1.4 -4.9 ATP-dependent Clp protease, ATP-binding subunit compare
Atu1810 -1.4 -1.1 hypothetical protein compare
Atu0086 -1.3 -1.5 ribosome-binding factor A compare
Atu1308 -1.3 -4.4 aspartate carbamoyl transferase catalytic subunit compare
Atu0784 -1.3 -4.0 hypothetical protein compare
Atu0298 -1.2 -4.6 orotidine 5 compare
Atu0895 -1.1 -2.3 ABC transporter, substrate binding protein compare
Atu0142 -1.1 -2.4 cytochrome o ubiquinol oxidase subunit II compare
Atu1307 -1.1 -3.0 dihydroorotase compare
Atu0809 -1.1 -1.7 hypothetical protein compare
Atu2832 -1.1 -3.1 tRNA modification GTPase compare
Atu1620 -1.0 -6.6 triosephosphate isomerase compare
Atu2801 -1.0 -3.5 precorrin-2 C20 methyltransferase compare
Atu2184 -1.0 -4.1 transcriptional regulator, AsnC family compare
Atu1513 -1.0 -4.8 ABC excinuclease subunit A compare
Atu6098 -1.0 -1.0 transcriptional regulator, HTH family compare
Atu2831 -1.0 -3.6 glucose inhibited division protein A compare
Atu4418 -1.0 -3.8 glutaryl-CoA dehydrogenase compare
Atu0051 -1.0 -3.3 two component sensor kinase compare
Atu0977 -1.0 -2.6 serine protease DO-like protease compare
Atu1446 -1.0 -1.4 two component response regulator compare
Atu1076 -1.0 -3.7 colicin V production protein compare
Atu1455 -1.0 -3.5 hypothetical protein compare
Atu1470 -0.9 -1.4 Camphor resistance protein compare
Atu2433 -0.9 -1.3 hypothetical protein compare
Atu2439 -0.9 -1.0 hypothetical protein compare
Atu1359 -0.9 -1.0 dnaK deletion suppressor protein compare
Atu0149 -0.9 -3.4 enoyl-(acyl-carrier-protein) reductase compare
Atu1774 -0.9 -4.8 ABC transporter, substrate binding protein (peptide) compare
Atu0040 -0.9 -1.1 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu0659 -0.9 -3.2 NTP pyrophosphohydrolase, MutT family compare
Atu1677 -0.9 -2.6 queuine tRNA-ribosyltransferase compare
Atu3754 -0.8 -4.1 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu8138 -0.8 -1.7 hypothetical protein compare
Atu1619 -0.8 -2.2 protein-export membrane protein SECG compare
Atu0361 -0.8 -1.9 transcriptional regulator compare
Atu0041 -0.8 -1.6 glutamine amidotransferase compare
Atu0038 -0.8 -2.7 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu0755 -0.8 -2.3 hypothetical protein compare
Atu5430 -0.8 -1.0 hypothetical protein compare
Atu4173 -0.8 -1.8 phosphoenolpyruvate-protein phosphotransferase compare
Atu2115 -0.8 -4.9 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu0141 -0.8 -0.9 cytochrome O ubiquinol oxidase subunit I compare
Atu2650 -0.8 -5.6 glycerol-3-phosphate dehydrogenase compare
Atu0189 -0.8 -2.3 ABC transporter, membrane spanning protein (peptide) compare
Atu2201 -0.8 -2.4 hydrolase compare
Atu1141 -0.8 -4.6 Phosphoribosylglycinamide synthetase compare
Atu2634 -0.8 -1.8 hypothetical protein compare
Atu3603 -0.8 -1.9 two component response regulator compare
Atu2802 -0.8 -4.6 precorrin-8X methylmutase compare
Atu3014 -0.8 -1.8 hypothetical protein compare
Atu2824 -0.7 -2.9 hypothetical protein compare
Atu0269 -0.7 -2.4 exodeoxyribonuclease VII large subunit compare
Atu5173 -0.7 -2.0 dehydrogenase compare
Atu1439 -0.7 -1.5 hypothetical protein compare
Atu8023 -0.7 -2.0 hypothetical protein compare
Atu2235 -0.7 -2.1 hypothetical protein compare
Atu0346 -0.7 -1.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu0658 -0.7 -4.3 phosphate permease compare
Atu1417 -0.7 -4.3 enoyl-CoA hydratase compare
Atu4099 -0.7 -4.0 hypothetical protein compare
Atu2807 -0.7 -4.0 cob(I)alamin adenosyltransferase compare
Atu4773 -0.7 -1.4 two component response regulator compare
Atu0062 -0.7 -4.0 transcriptional regulator, ROK family compare
Atu0354 -0.7 -1.4 ferric uptake regulator compare
Atu1503 -0.7 -1.0 hypothetical protein compare
Atu2484 -0.7 -0.9 hypothetical protein compare
Atu2052 -0.7 -2.7 hypothetical protein compare
Atu8170 -0.7 -1.3 hypothetical protein compare
Atu0190 -0.7 -3.6 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu3740 -0.7 -4.2 fructose bisphosphate aldolase compare
Atu4686 -0.7 -1.9 hypothetical protein compare
Atu1258 -0.7 -3.5 ATP-dependent Clp protease, proteolytic subunit compare
Atu3479 -0.7 -4.4 3-methylcrotonyl-CoA carboxylase subunit alpha compare
Atu5540 -0.6 -0.9 hypothetical protein compare
Atu0690 -0.6 -1.7 hypothetical protein compare
Atu4385 -0.6 -2.6 hypothetical protein compare
Atu3481 -0.6 -2.1 enoyl-CoA hydratase compare
Atu1660 -0.6 -2.7 hypothetical protein compare
Atu5470 -0.6 -1.1 hypothetical protein compare
Atu0434 -0.6 -1.6 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu1891 -0.6 -2.3 cobalamin biosynthesis protein compare
Atu0153 -0.6 -2.7 transcriptional regulator, Fur family compare
Atu0923 -0.6 -3.5 hypothetical protein compare
Atu1204 -0.6 -2.8 potassium uptake protein compare
Atu2798 -0.6 -2.3 precorrin-6y methyltransferase compare
Atu0946 -0.6 -3.9 dehydrogenase compare
Atu6153 -0.6 -1.3 conserved hypothetical protein compare
Atu2073 -0.6 -2.8 membrane protein compare
Atu2239 -0.6 -1.5 ubiquinol-cytochrome C reductase iron-sulfur subunit compare
Atu4148 -0.6 -2.5 UDP-glucuronic acid epimerase compare
Atu0295 -0.6 -2.0 hypothetical protein compare
Atu0677 -0.6 -1.7 hypothetical protein compare
Atu0039 -0.6 -1.3 imidazoleglycerol-phosphate synthase cyclase compare
Atu1714 -0.6 -1.1 exonuclease III compare
Atu2684 -0.6 -0.8 hypothetical protein compare
Atu2793 -0.6 -2.7 cobyrinic acid a,c-diamide synthase compare
Atu2344 -0.6 -1.8 lactoylglutathione lyase compare
Atu3286 -0.6 -2.6 ABC transporter permease compare
Atu2352 -0.6 -0.9 hypothetical protein compare
Atu3721 -0.6 -1.8 hypothetical protein compare
Atu2805 -0.6 -2.8 cobalamin synthesis protein compare
Atu2584 -0.6 -2.5 hypothetical protein compare
Atu0947 -0.6 -2.8 transcriptional regulator, AsnC family compare
Atu3730 -0.6 -0.9 hypothetical protein compare
Atu4161 -0.6 -1.3 hypothetical protein compare
Atu0630 -0.6 -1.6 hypothetical protein compare
Atu3608 -0.6 -3.2 hypothetical protein compare
Atu2617 -0.6 -1.5 chemotaxis protein compare
Atu4153 -0.6 -4.1 aldehyde dehydrogenase compare
Atu0893 -0.6 -2.4 ABC transporter, nucleotide binding/ATPase protein compare
Atu0050 -0.6 -2.2 two component response regulator compare
Atu1380 -0.6 -3.1 zinc metallopeptidase compare
Atu0230 -0.6 -1.2 hypothetical protein compare
Atu4407 -0.6 -0.9 periplasmic nitrate reductase, NapD protein compare
Atu5034 -0.6 -0.9 hypothetical protein compare
Atu3480 -0.6 -4.1 hydroxymethylglutaryl-CoA lyase compare
Atu2694 -0.6 -1.0 hypothetical protein compare
Atu0535 -0.5 -2.7 hypothetical protein compare
Atu8202 -0.5 -2.5 hypothetical protein compare
Atu0026 -0.5 -0.7 hypothetical protein compare
Atu8130 -0.5 -2.8 hypothetical protein compare
Atu3835 -0.5 -2.7 hypothetical protein compare
Atu3461 -0.5 -1.4 GntR family transcriptional regulator compare
Atu3018 -0.5 -2.4 hypothetical protein compare
Atu2615 -0.5 -2.7 hypothetical protein compare
Atu1535 -0.5 -1.2 cytochrome c oxidase, FixQ chain compare
Atu6009 -0.5 -2.5 indole-3-lactate synthase compare
Atu0876 -0.5 -1.2 superoxide dismutase compare
Atu4435 -0.5 -2.7 oligopeptide ABC transporter ATPase compare
Atu4139 -0.5 -1.4 hypothetical protein compare
Atu1803 -0.5 -1.7 cold shock protein compare
Atu3248 -0.5 -2.9 cell division inhibitor compare
Atu0792 -0.5 -2.6 hypothetical protein compare
Atu2267 -0.5 -2.3 hypothetical protein compare
Atu0162 -0.5 -2.2 biopolymer transport protein compare
Atu3485 -0.5 -2.9 short chain dehydrogenase compare
Atu1874 -0.5 -1.3 RecA protein compare
Atu1467 -0.5 -3.0 hypothetical protein compare
Atu0375 -0.5 -1.4 small heat shock protein compare
Atu4541 -0.5 -2.4 carboxymuconolactone decarboxylase compare
Atu2441 -0.5 -1.7 RNA methylase compare
Atu4226 -0.5 -3.2 transcriptional regulator compare
Atu1902 -0.5 -2.1 transketolase compare
Atu3249 -0.5 -2.8 septum formation inhibitor compare
Atu0031 -0.5 -0.7 PTS system, IIA component compare
Atu1129 -0.5 -2.7 excinuclease ABC chain C compare
Atu1629 -0.5 -0.8 transcriptional regulator, ArsR family compare
Atu0029 -0.5 -1.9 S-adenosylhomocysteine hydrolase compare
Atu0907 -0.5 -1.6 Phosphinothricin acetyltransferase compare
Atu0036 -0.5 -1.2 hypothetical protein compare
Atu2442 -0.5 -1.4 hypothetical protein compare
Atu4874 -0.5 -2.9 hypothetical protein compare
Atu1099 -0.5 -2.2 hypothetical protein compare
Atu3697 -0.5 -1.9 ATP-dependent protease LA 2 compare
Atu3750 -0.5 -1.1 thiamine-phosphate pyrophosphorylase compare
Atu3024 -0.5 -3.8 sugar ABC transporter permease compare
Atu2127 -0.5 -2.7 L-carnitine dehydratase compare
Atu4157 -0.5 -4.0 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase compare
Atu4446 -0.5 -2.8 hypothetical protein compare
Atu1838 -0.5 -1.7 ABC transporter, substrate binding protein (amino acid) compare
Atu0344 -0.5 -2.2 hypothetical protein compare
Atu1468 -0.5 -2.5 hypothetical protein compare
Atu1845 -0.4 -1.9 phosphoribosylformylglycinamidine synthase I compare
Atu0499 -0.4 -2.6 hypothetical protein compare
Atu2125 -0.4 -0.7 ABC transporter, nucleotide binding/ATPase protein compare
Atu4077 -0.4 -2.6 glycogen branching protein compare
Atu2797 -0.4 -2.0 cobalamin biosynthesis protein compare
Atu2729 -0.4 -1.2 hypothetical protein compare
Atu1209 -0.4 -2.9 transcriptional regulator, LysR family compare
Atu3727 -0.4 -1.8 hypothetical protein compare
Atu1021 -0.4 -1.2 outer membrane protein compare
Atu8167 -0.4 -3.0 putative transmembrane protein compare
Atu1344 -0.4 -0.9 hypothetical protein compare
Atu0894 -0.4 -1.1 ABC transporter, membrane spanning protein compare
Atu2808 -0.4 -2.1 cobyric acid synthase compare
Atu0687 -0.4 -1.1 hypothetical protein compare
Atu0636 -0.4 -2.4 hypothetical protein compare
Atu2606 -0.4 -2.2 transcriptional regulator, GntR family compare
Atu1134 -0.4 -2.9 hypothetical protein compare
Atu5511 -0.4 -2.1 hypothetical protein compare
Atu8099 -0.4 -1.5 hypothetical protein compare
Atu4187 -0.4 -0.6 tRNA-Met compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_lettuce_leaf experiments

For lb_lettuce_leaf Lettuce_Leaf across organisms