Experiment set12IT012 for Agrobacterium fabrum C58

Compare to:

LB_Lettuce_Leaf

200 most important genes:

  gene name fitness t score description  
Atu3763 -3.2 -2.2 hypothetical protein compare
Atu0086 -2.7 -2.3 ribosome-binding factor A compare
Atu0399 -2.6 -7.6 dihydroorotase compare
Atu2125 -2.6 -3.0 ABC transporter, nucleotide binding/ATPase protein compare
Atu1030 -2.4 -2.6 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2554 -2.2 -3.4 lysyl-tRNA synthetase compare
Atu0030 -2.2 -2.2 phosphocarrier protein HPr compare
Atu1573 -2.0 -2.0 hypothetical protein compare
Atu0163 -1.9 -6.9 tonB protein compare
Atu0894 -1.9 -3.0 ABC transporter, membrane spanning protein compare
Atu1163 -1.9 -2.7 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu0354 -1.7 -2.8 ferric uptake regulator compare
Atu0486 -1.7 -5.1 dihydroorotate dehydrogenase compare
Atu1308 -1.7 -3.3 aspartate carbamoyl transferase catalytic subunit compare
Atu0050 -1.7 -5.7 two component response regulator compare
Atu6098 -1.7 -1.2 transcriptional regulator, HTH family compare
Atu4072 -1.7 -1.7 nodulation protein N compare
Atu0298 -1.6 -5.8 orotidine 5 compare
Atu1307 -1.5 -4.0 dihydroorotase compare
Atu2067 -1.5 -1.4 hypothetical protein compare
Atu3469 -1.5 -3.0 phosphoglyceromutase compare
Atu2640 -1.5 -4.2 hypothetical protein compare
Atu0184 -1.4 -2.5 glucokinase compare
Atu0161 -1.4 -8.9 biopolymer transport protein compare
Atu4317 -1.3 -1.9 TetR family transcriptional regulator compare
Atu0723 -1.3 -1.9 FAD dependent oxidoreductase compare
Atu0331 -1.2 -2.4 sigma-54 modulation protein compare
Atu2207 -1.2 -1.9 two component sensor kinase compare
Atu2832 -1.1 -4.0 tRNA modification GTPase compare
Atu0419 -1.1 -2.2 two component sensor kinase compare
Atu0895 -1.1 -2.7 ABC transporter, substrate binding protein compare
Atu2439 -1.1 -1.5 hypothetical protein compare
Atu0659 -1.1 -4.0 NTP pyrophosphohydrolase, MutT family compare
Atu4217 -1.0 -0.9 TetR family transcriptional regulator compare
Atu4173 -1.0 -2.1 phosphoenolpyruvate-protein phosphotransferase compare
Atu3730 -1.0 -0.8 hypothetical protein compare
Atu1845 -1.0 -2.9 phosphoribosylformylglycinamidine synthase I compare
Atu8161 -0.9 -1.0 hypothetical protein compare
Atu1110 -0.9 -1.9 cytosol aminopeptidase compare
Atu2184 -0.9 -4.5 transcriptional regulator, AsnC family compare
Atu0953 -0.9 -0.9 hypothetical protein compare
Atu0162 -0.9 -2.4 biopolymer transport protein compare
Atu4882 -0.9 -1.3 hypothetical protein compare
Atu1446 -0.9 -1.3 two component response regulator compare
Atu1076 -0.9 -2.6 colicin V production protein compare
Atu0923 -0.9 -2.9 hypothetical protein compare
Atu0189 -0.9 -1.9 ABC transporter, membrane spanning protein (peptide) compare
Atu1364 -0.9 -3.7 ATP-dependent Clp protease, ATP-binding subunit compare
Atu3689 -0.9 -5.5 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu0893 -0.9 -2.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu0031 -0.9 -1.1 PTS system, IIA component compare
Atu1904 -0.9 -2.1 transcriptional regulator compare
Atu0051 -0.8 -3.1 two component sensor kinase compare
Atu1846 -0.8 -1.4 hypothetical protein compare
Atu1570 -0.8 -0.7 hypothetical protein compare
Atu1141 -0.8 -4.6 Phosphoribosylglycinamide synthetase compare
Atu1380 -0.8 -3.5 zinc metallopeptidase compare
Atu3691 -0.8 -3.7 iron (III) dicitrate ABC transporter ATPase compare
Atu0784 -0.8 -1.6 hypothetical protein compare
Atu5540 -0.8 -0.9 hypothetical protein compare
Atu3688 -0.8 -2.8 iron(III ABC transporter permease dicitrate ABC transporter permease compare
Atu0658 -0.7 -4.0 phosphate permease compare
Atu1469 -0.7 -2.5 hypothetical protein compare
Atu0039 -0.7 -1.5 imidazoleglycerol-phosphate synthase cyclase compare
Atu6131 -0.7 -2.3 TraR Antiactivator compare
Atu3468 -0.7 -0.7 hypothetical protein compare
Atu1140 -0.7 -2.6 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3754 -0.7 -4.0 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2802 -0.7 -4.3 precorrin-8X methylmutase compare
Atu2787 -0.7 -0.8 hypothetical protein compare
Atu0749 -0.7 -2.4 biotin synthesis BioY protein compare
Atu2115 -0.7 -4.0 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu0041 -0.7 -0.9 glutamine amidotransferase compare
Atu4139 -0.7 -2.1 hypothetical protein compare
Atu0166 -0.7 -3.1 hypothetical protein compare
Atu3690 -0.7 -2.9 iron (III ABC transporter permease dicitrate ABC transporter permease compare
Atu3755 -0.7 -2.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu2803 -0.7 -1.7 Cobalamin biosynthesis associated protein compare
Atu5160 -0.7 -1.4 transcriptional regulator protein compare
Atu2083 -0.7 -2.2 DNA repair protein RecN compare
Atu2800 -0.7 -1.1 precorrin-3B C17-methyltransferase compare
Atu4148 -0.6 -2.4 UDP-glucuronic acid epimerase compare
Atu5470 -0.6 -0.7 hypothetical protein compare
Atu0141 -0.6 -1.0 cytochrome O ubiquinol oxidase subunit I compare
Atu1714 -0.6 -1.1 exonuclease III compare
Atu2235 -0.6 -1.6 hypothetical protein compare
Atu5088 -0.6 -1.6 hypothetical protein compare
Atu2824 -0.6 -2.3 hypothetical protein compare
Atu8138 -0.6 -1.3 hypothetical protein compare
Atu0876 -0.6 -0.9 superoxide dismutase compare
Atu3009 -0.6 -1.0 exopolysaccharide production protein compare
Atu5146 -0.6 -1.8 hypothetical protein compare
Atu2692 -0.6 -1.5 intracellular septation protein compare
Atu0361 -0.6 -1.2 transcriptional regulator compare
Atu1902 -0.6 -3.1 transketolase compare
Atu3018 -0.6 -1.5 hypothetical protein compare
Atu0119 -0.6 -0.8 hypothetical protein compare
Atu1679 -0.6 -1.4 peptidyl prolyl cis-trans isomerase compare
Atu3687 -0.6 -4.9 TonB-dependent receptor compare
Atu4099 -0.6 -3.0 hypothetical protein compare
Atu1204 -0.6 -2.6 potassium uptake protein compare
Atu1774 -0.6 -2.6 ABC transporter, substrate binding protein (peptide) compare
Atu0777 -0.6 -0.6 hypothetical protein compare
Atu0269 -0.6 -2.1 exodeoxyribonuclease VII large subunit compare
Atu1620 -0.6 -3.8 triosephosphate isomerase compare
Atu2555 -0.6 -1.7 L-lysine 2,3-aminomutase compare
Atu1891 -0.6 -2.1 cobalamin biosynthesis protein compare
Atu3022 -0.5 -3.9 sugar ABC transporter permease compare
Atu0421 -0.5 -0.9 ABC transporter, membrane spanning protein compare
Atu0662 -0.5 -2.1 transcriptional regulator, GntR family compare
Atu5430 -0.5 -0.7 hypothetical protein compare
Atu3532 -0.5 -2.8 GntR family transcriptional regulator compare
Atu1417 -0.5 -3.0 enoyl-CoA hydratase compare
Atu2831 -0.5 -2.5 glucose inhibited division protein A compare
Atu0025 -0.5 -1.4 hypothetical protein compare
Atu2616 -0.5 -2.5 hypothetical protein compare
Atu2801 -0.5 -1.8 precorrin-2 C20 methyltransferase compare
Atu1803 -0.5 -3.2 cold shock protein compare
Atu4407 -0.5 -1.2 periplasmic nitrate reductase, NapD protein compare
Atu2795 -0.5 -2.4 cobalamin biosynthetic protein compare
Atu2797 -0.5 -1.9 cobalamin biosynthesis protein compare
Atu0971 -0.5 -1.2 two component sensor kinase compare
Atu2532 -0.5 -2.1 transcriptional regulator, MarR family compare
Atu0400 -0.5 -1.4 orotate phosphoribosyltransferase compare
Atu0886 -0.5 -0.8 hypothetical protein compare
Atu4527 -0.5 -1.0 hypothetical protein compare
Atu3485 -0.5 -3.1 short chain dehydrogenase compare
Atu2333 -0.5 -2.2 ATP-dependent RNA helicase compare
Atu1182 -0.5 -1.0 hypothetical protein compare
Atu1293 -0.5 -1.7 hypothetical protein compare
Atu3608 -0.5 -2.1 hypothetical protein compare
Atu3486 -0.5 -0.9 DeoR family transcriptional regulator compare
Atu0889 -0.5 -1.9 hypothetical protein compare
Atu0346 -0.5 -1.1 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu2236 -0.5 -1.5 adenine phosphoribosyltransferase compare
Atu0079 -0.5 -2.3 Atu0079-1 mutant of pfkB family carbohydrate kinase compare
Atu1359 -0.5 -0.6 dnaK deletion suppressor protein compare
Atu6186 -0.5 -2.0 virA/G regulated protein compare
Atu1513 -0.5 -2.1 ABC excinuclease subunit A compare
Atu6114 -0.5 -1.2 hypothetical protein compare
Atu0126 -0.5 -2.6 membrane lipoprotein compare
Atu4161 -0.5 -1.1 hypothetical protein compare
Atu5164 -0.5 -0.5 type IV secretion protein AvhB3 compare
Atu2290 -0.5 -2.5 probable acetyltransferase compare
Atu4884 -0.5 -1.6 hypothetical protein compare
Atu3815 -0.5 -2.4 GntR family transcriptional regulator compare
Atu2357 -0.5 -1.6 hypothetical protein compare
Atu3697 -0.5 -2.4 ATP-dependent protease LA 2 compare
Atu3031 -0.5 -0.9 hypothetical protein compare
Atu1075 -0.5 -1.9 amidophosphoribosyltransferase compare
Atu1853 -0.4 -2.1 hypothetical protein compare
Atu0085 -0.4 -1.5 tRNA pseudouridine 55 synthase compare
Atu2433 -0.4 -0.7 hypothetical protein compare
Atu1099 -0.4 -2.2 hypothetical protein compare
Atu2017 -0.4 -0.5 hypothetical protein compare
Atu3707 -0.4 -1.3 phosphoserine aminotransferase compare
Atu0017 -0.4 -1.4 N-(5-phosphoribosyl) anthranilate isomerase compare
Atu4391 -0.4 -0.9 nitric oxide reductase NorE protein compare
Atu2140 -0.4 -1.4 hypothetical protein compare
Atu3963 -0.4 -2.4 GntR family transcriptional regulator compare
Atu4108 -0.4 -2.4 ribonuclease D compare
Atu4875 -0.4 -2.1 hypothetical protein compare
Atu1677 -0.4 -1.8 queuine tRNA-ribosyltransferase compare
Atu2026 -0.4 -1.4 exodeoxyribonuclease V compare
Atu2217 -0.4 -1.2 hypothetical protein compare
Atu3727 -0.4 -1.7 hypothetical protein compare
Atu1588 -0.4 -2.6 homoserine dehydrogenase compare
Atu3573 -0.4 -1.9 hypothetical protein compare
Atu8170 -0.4 -1.0 hypothetical protein compare
Atu1847 -0.4 -1.0 hypothetical protein compare
Atu0120 -0.4 -2.2 hypothetical protein compare
Atu8130 -0.4 -3.0 hypothetical protein compare
Atu4346 -0.4 -2.9 hypothetical protein compare
Atu2600 -0.4 -2.2 ABC transporter, nucleotide binding/ATPase protein (maltose/maltodextrin) compare
Atu5028 -0.4 -1.5 IS426 transposase compare
Atu1529 -0.4 -1.5 nitrogen fixation protein FixH compare
Atu4077 -0.4 -2.5 glycogen branching protein compare
Atu4364 -0.4 -2.5 LacI family transcriptional regulator compare
Atu1475 -0.4 -1.4 hypothetical protein compare
Atu3604 -0.4 -0.7 hypoxanthine phosphoribosyltransferase compare
Atu0598 -0.4 -2.2 phosphogluconate dehydratase compare
Atu4200 -0.4 -1.6 hypothetical protein compare
Atu2584 -0.4 -1.4 hypothetical protein compare
Atu2279 -0.4 -1.9 ABC transporter, nucleotide binding/ATPase protein (proline/glycine betaine) compare
Atu2127 -0.4 -2.4 L-carnitine dehydratase compare
Atu3480 -0.4 -2.4 hydroxymethylglutaryl-CoA lyase compare
Atu8054 -0.4 -0.4 hypothetical protein compare
Atu4630 -0.4 -1.4 hypothetical protein compare
Atu4159 -0.4 -1.1 AsnC family transcriptional regulator compare
Atu8191 -0.4 -0.6 hypothetical protein compare
Atu3901 -0.4 -2.1 nitrite reductase small subunit compare
Atu0413 -0.4 -0.9 stress induced protein compare
Atu2605 -0.4 -1.2 hypothetical protein compare
Atu2582 -0.4 -1.7 UDP-glucose/GDP-mannose dehydrogenase compare
Atu2655 -0.4 -2.1 hypothetical protein compare
Atu3740 -0.4 -1.9 fructose bisphosphate aldolase compare
Atu1019 -0.4 -1.0 hypothetical protein compare
Atu1474 -0.4 -2.1 hypothetical protein compare
Atu2728 -0.4 -1.1 beta (1-->2) glucan export ATP-binding protein compare
Atu4157 -0.4 -3.2 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_lettuce_leaf experiments

For lb_lettuce_leaf Lettuce_Leaf across organisms