Experiment set12IT010 for Agrobacterium fabrum C58

Compare to:

LB_cucumber_cotlyden

200 most detrimental genes:

  gene name fitness t score description  
Atu6165 +1.0 1.4 hypothetical protein compare
Atu3794 +1.0 6.8 FadR family transcriptional regulator compare
Atu4896 +1.0 3.7 acetyltransferase compare
Atu3468 +0.9 1.5 hypothetical protein compare
Atu3001 +0.9 2.6 hypothetical protein compare
Atu4894 +0.9 5.2 transposase compare
Atu2163 +0.9 1.3 hypothetical protein compare
Atu4893 +0.8 4.8 hypothetical protein compare
Atu1302 +0.8 2.9 hypothetical protein compare
Atu3791 +0.8 4.8 L-asparaginase compare
Atu3886 +0.8 5.1 lysophospholipase compare
Atu8010 +0.7 1.5 hypothetical protein compare
Atu4187 +0.7 1.5 tRNA-Met compare
Atu0912 +0.7 1.4 Na+/H+ antiporter compare
Atu3008 +0.7 1.2 hypothetical protein compare
Atu4792 +0.7 2.1 hypothetical protein compare
Atu3780 +0.7 4.2 hypothetical protein compare
Atu3006 +0.7 3.3 hypothetical protein compare
Atu1149 +0.6 1.3 adenylate cyclase compare
Atu1980 +0.6 2.0 hypothetical protein compare
Atu1475 +0.6 2.3 hypothetical protein compare
Atu4897 +0.6 1.8 hypothetical protein compare
Atu0533 +0.6 2.0 putative inhibitor of septum formation compare
Atu1219 +0.6 0.9 hypothetical protein compare
Atu1333 +0.6 2.4 outer membrane protein compare
Atu0926 +0.6 3.4 hypothetical protein compare
Atu1223 +0.6 1.0 hypothetical protein compare
Atu2683 +0.6 1.4 hypothetical protein compare
Atu0119 +0.6 1.1 hypothetical protein compare
Atu0544 +0.5 1.9 hypothetical protein compare
Atu2379 +0.5 4.1 phosphomannomutase compare
Atu1327 +0.5 2.2 NADH-ubiquinone oxidoreductase compare
Atu3010 +0.5 3.5 hypothetical protein compare
Atu1175 +0.5 1.2 hypothetical protein compare
Atu0931 +0.5 4.2 penicillin binding protein compare
Atu4232 +0.5 2.6 GntR family transcriptional regulator compare
Atu2620 +0.5 1.0 hypothetical protein compare
Atu5475 +0.5 1.3 hypothetical protein compare
Atu5513 +0.5 0.9 cold shock protein compare
Atu4892 +0.5 3.9 hypothetical protein compare
Atu0458 +0.5 3.0 hypothetical protein compare
Atu3892 +0.5 1.9 hypothetical protein compare
Atu2648 +0.5 2.1 hypothetical protein compare
Atu0718 +0.5 1.7 hypothetical protein compare
Atu0925 +0.5 2.1 hypothetical protein compare
Atu0375 +0.5 1.6 small heat shock protein compare
Atu0785 +0.5 2.4 ribosomal-protein (S5)-alanine N-acetyltransferase compare
Atu0463 +0.5 1.7 hypothetical protein compare
Atu8012 +0.5 1.4 hypothetical protein compare
Atu8085 +0.5 1.9 hypothetical protein compare
Atu2511 +0.5 3.3 D-alanine aminotransferase compare
Atu0464 +0.5 2.8 hypothetical protein compare
Atu0551 +0.5 1.4 flagellar protein FLGA precursor compare
Atu2677 +0.5 1.7 protein tyrosine phosphatase compare
Atu2183 +0.5 2.8 lipopolysaccharide core biosynthesis mannosyltransferase compare
Atu5183 +0.4 2.1 hypothetical protein compare
Atu2204 +0.4 1.1 hypothetical protein compare
Atu1435 +0.4 1.0 hypothetical protein compare
Atu4527 +0.4 1.2 hypothetical protein compare
Atu1241 +0.4 2.2 hypothetical protein compare
Atu1570 +0.4 0.6 hypothetical protein compare
Atu2201 +0.4 1.1 hydrolase compare
Atu0546 +0.4 2.8 flagellar biosynthetic protein compare
Atu2130 +0.4 1.1 hypothetical protein compare
Atu1254 +0.4 1.2 transcriptional regulator, ArsR family compare
Atu0479 +0.4 1.9 ABC transporter, substrate binding protein (amino acid) compare
Atu1683 +0.4 1.3 hypothetical protein compare
Atu2368 +0.4 0.9 hypothetical protein compare
Atu4444 +0.4 2.5 hippurate hydrolase compare
Atu0162 +0.4 2.0 biopolymer transport protein compare
Atu1260 +0.4 0.9 hypothetical protein compare
Atu8036 +0.4 1.6 protein YBGT-like protein compare
Atu3668 +0.4 1.0 siderophore biosynthesis protein compare
Atu3011 +0.4 1.9 ArsR family transcriptional regulator compare
Atu3311 +0.4 3.6 phosphomannose isomerase compare
Atu3509 +0.4 1.0 hypothetical protein compare
Atu3999 +0.4 1.4 dithiobiotin synthetase compare
Atu5046 +0.4 1.2 hypothetical protein compare
Atu4787 +0.4 2.5 inositol monophosphatase compare
Atu4791 +0.4 2.3 hypothetical protein compare
Atu0477 +0.4 1.1 hypothetical protein compare
Atu8052 +0.4 0.8 hypothetical protein compare
Atu2472 +0.4 0.7 hypothetical protein compare
Atu1868 +0.4 1.8 tRNA/rRNA methyltransferase compare
Atu3878 +0.4 3.1 transcriptional regulator compare
Atu4890 +0.4 1.2 IS426 transposase compare
Atu0606 +0.4 1.2 hypothetical protein compare
Atu1252 +0.4 1.3 hypothetical protein compare
Atu1009 +0.4 1.0 hypothetical protein compare
Atu8203 +0.4 1.6 hypothetical protein compare
Atu1346 +0.4 2.3 phenazine antibiotic biosynthesis related protein compare
Atu0435 +0.4 0.6 tRNA-Gly compare
Atu3523 +0.4 2.3 polysaccharide biosynthesis-like protein compare
Atu6153 +0.4 1.8 conserved hypothetical protein compare
Atu1056 +0.4 2.4 hypothetical protein compare
Atu1801 +0.4 1.0 hypothetical protein compare
Atu8122 +0.4 2.3 hypothetical protein compare
Atu1840 +0.4 2.7 hypothetical protein compare
Atu1439 +0.4 0.9 hypothetical protein compare
Atu4141 +0.4 2.0 hypothetical protein compare
Atu4614 +0.4 2.7 glycosyltransferase compare
Atu3268 +0.4 2.2 dipeptide ABC transporter permease compare
Atu4702 +0.4 2.4 GntR family transcriptional regulator compare
Atu3522 +0.4 1.9 glucans biosynthesis protein compare
Atu8133 +0.4 1.5 hypothetical protein compare
Atu0538 +0.4 1.2 hypothetical protein compare
Atu1048 +0.4 2.2 ABC transporter, membrane spanning protein compare
Atu3443 +0.4 1.6 hypothetical protein compare
Atu4220 +0.4 2.0 short-chain dehydrogenase compare
Atu0854 +0.4 1.9 hypothetical protein compare
Atu3289 +0.4 1.5 thiamine-phosphate pyrophosphorylase compare
Atu0041 +0.4 0.5 glutamine amidotransferase compare
Atu0782 +0.4 1.7 hypothetical protein compare
Atu3653 +0.4 1.4 hypothetical protein compare
Atu1286 +0.3 2.2 hypothetical protein compare
Atu6112 +0.3 1.7 conserved hypothetical protein compare
Atu2571 +0.3 1.7 acyl carrier protein, putative compare
Atu5489 +0.3 1.2 hypothetical protein compare
Atu2783 +0.3 1.3 acetyltransferase compare
Atu1921 +0.3 1.7 hypothetical protein compare
Atu1133 +0.3 1.9 ribonuclease compare
Atu3775 +0.3 1.2 hypothetical protein compare
Atu1882 +0.3 1.4 usg protein compare
Atu3105 +0.3 1.7 hypothetical protein compare
Atu3563 +0.3 2.3 transcription elongation factor regulatory protein compare
Atu6179 +0.3 1.3 virA/G regulated protein compare
Atu2166 +0.3 1.2 hypothetical protein compare
Atu0986 +0.3 0.6 hypothetical protein compare
Atu1692 +0.3 1.2 hypothetical protein compare
Atu1499 +0.3 2.3 penicillin binding protein compare
Atu1859 +0.3 1.2 glutaminase A compare
Atu3663 +0.3 0.6 hypothetical protein compare
Atu0467 +0.3 1.0 hypothetical protein compare
Atu4889 +0.3 1.9 hypothetical protein compare
Atu1952 +0.3 0.7 hypothetical protein compare
Atu5121 +0.3 2.4 two component response regulator compare
Atu5047 +0.3 1.4 hypothetical protein compare
Atu1038 +0.3 1.0 two component response regulator compare
Atu3519 +0.3 2.2 peptidyl-prolyl cis-trans isomerase compare
Atu1049 +0.3 1.4 hypothetical protein compare
Atu2618 +0.3 1.7 methyl-accepting chemotaxis protein compare
Atu4884 +0.3 1.2 hypothetical protein compare
Atu4342 +0.3 1.0 hypothetical protein compare
Atu0107 +0.3 1.1 hypothetical protein compare
Atu8169 +0.3 1.7 hypothetical protein compare
Atu2436 +0.3 1.2 hypothetical protein compare
Atu0795 +0.3 1.1 hypothetical protein compare
Atu5517 +0.3 0.8 hypothetical protein compare
Atu4079 +0.3 1.3 hypothetical protein compare
Atu0899 +0.3 1.7 dihydrodipicolinate synthase compare
Atu6157 +0.3 1.7 conserved hypothetical protein compare
Atu8156 +0.3 1.0 hypothetical protein compare
Atu1238 +0.3 1.9 polysaccharide export protein compare
Atu5545 +0.3 1.1 hypothetical protein compare
Atu4469 +0.3 0.9 iron ABC transporter permease compare
Atu4525 +0.3 1.8 oligopeptide ABC transporter substrate-binding protein compare
Atu5114 +0.3 0.8 hypothetical protein compare
Atu0181 +0.3 1.4 hypothetical protein compare
Atu1170 +0.3 1.5 RhtB family transporter compare
Atu1842 +0.3 2.2 hypothetical protein compare
Atu0386 +0.3 0.8 hypothetical protein compare
Atu0845 +0.3 1.5 hypothetical protein compare
Atu2305 +0.3 2.0 MFS permease compare
Atu3577 +0.3 1.7 transcriptional regulator compare
Atu1676 +0.3 1.6 para-aminobenzoate synthase component I compare
Atu4613 +0.3 2.5 glycosyltransferase compare
Atu8177 +0.3 1.5 hypothetical protein compare
Atu4543 +0.3 1.1 LysR family transcriptional regulator compare
Atu4674 +0.3 2.2 GntR family transcriptional regulator compare
Atu1906 +0.3 0.8 ABC transporter, membrane spanning protein compare
Atu1914 +0.3 2.1 ATPase, AAA family protein compare
Atu5462 +0.3 1.4 ABC transporter nucleotide binding/ATPase compare
Atu1836 +0.3 0.8 hypothetical protein compare
Atu4006 +0.3 1.8 AsnC family transcriptional regulator compare
Atu5148 +0.3 1.3 hypothetical protein compare
Atu0382 +0.3 0.8 hypothetical protein compare
Atu8060 +0.3 1.8 hypothetical protein compare
Atu2676 +0.3 1.3 4a-hydroxytetrahydrobiopterin dehydratase compare
Atu0924 +0.3 0.8 hypothetical protein compare
Atu3353 +0.3 2.1 mannose-1-phosphate guanylyltransferase compare
Atu3631 +0.3 1.7 hypothetical protein compare
Atu4454 +0.3 1.4 RpiR family transcriptional regulator compare
Atu8188 +0.3 1.7 hypothetical protein compare
Atu2344 +0.3 0.8 lactoylglutathione lyase compare
Atu3583 +0.3 1.2 hypothetical protein compare
Atu4200 +0.3 1.0 hypothetical protein compare
Atu3073 +0.3 1.8 aspartate racemase compare
Atu4498 +0.3 2.0 hypothetical protein compare
Atu3040 +0.3 1.9 hypothetical protein compare
Atu0627 +0.3 1.4 carboxymethylenebutenolidase compare
Atu2187 +0.3 0.6 transcriptional regulator, ArsR family compare
Atu8126 +0.3 1.7 putative phage tail protein I compare
Atu2502 +0.3 1.8 heme oxygenase compare
Atu8180 +0.3 1.3 hypothetical protein compare
Atu2225 +0.3 1.4 transcriptional regulator compare
Atu0996 +0.3 1.6 zinc-binding dehydrogenase compare
Atu2464 +0.3 0.9 formyltetrahydrofolate deformylase compare
Atu3947 +0.3 1.5 oxidoreductase compare
Atu6049 +0.3 2.0 hypothetical protein compare
Atu5452 +0.3 1.4 ABC transporter nucleotide binding/ATPase compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb_cucumber_cotlyden experiments

For lb_cucumber_cotlyden cucumber_cotlyden across organisms