Experiment set12IT006 for Agrobacterium fabrum C58

Compare to:

LB

200 most important genes:

  gene name fitness t score description  
Atu1030 -4.0 -3.7 GTP pyrophosphohydrolase/synthetase, RelA/SpoT family compare
Atu2684 -2.7 -2.5 hypothetical protein compare
Atu0331 -2.5 -3.3 sigma-54 modulation protein compare
Atu2439 -2.5 -2.4 hypothetical protein compare
Atu0141 -2.0 -2.2 cytochrome O ubiquinol oxidase subunit I compare
Atu4217 -1.9 -1.8 TetR family transcriptional regulator compare
Atu0769 -1.9 -2.4 protoheme IX farnesyltransferase compare
Atu0298 -1.8 -5.4 orotidine 5 compare
Atu0723 -1.8 -2.2 FAD dependent oxidoreductase compare
Atu1810 -1.7 -1.7 hypothetical protein compare
Atu0399 -1.7 -6.9 dihydroorotase compare
Atu4317 -1.6 -2.0 TetR family transcriptional regulator compare
Atu2207 -1.5 -2.0 two component sensor kinase compare
Atu2662 -1.5 -1.8 acetyltransferase compare
Atu3763 -1.4 -1.5 hypothetical protein compare
Atu1359 -1.4 -1.4 dnaK deletion suppressor protein compare
Atu0486 -1.3 -3.6 dihydroorotate dehydrogenase compare
Atu2125 -1.3 -1.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu1446 -1.3 -1.3 two component response regulator compare
Atu0040 -1.2 -1.4 phosphoribosylformino-5-aminoimidazole carboxamide ribotide isomerase compare
Atu2249 -1.2 -1.4 hypothetical protein compare
Atu2692 -1.2 -2.9 intracellular septation protein compare
Atu1219 -1.2 -1.3 hypothetical protein compare
Atu0361 -1.1 -2.1 transcriptional regulator compare
Atu2650 -1.1 -8.3 glycerol-3-phosphate dehydrogenase compare
Atu1714 -1.1 -1.8 exonuclease III compare
Atu0142 -1.1 -1.8 cytochrome o ubiquinol oxidase subunit II compare
Atu1110 -1.1 -3.0 cytosol aminopeptidase compare
Atu1308 -1.1 -2.9 aspartate carbamoyl transferase catalytic subunit compare
Atu0184 -1.0 -1.7 glucokinase compare
Atu1307 -1.0 -3.1 dihydroorotase compare
Atu3754 -1.0 -4.4 phosphoribosylaminoimidazole carboxylase catalytic subunit compare
Atu2554 -1.0 -2.3 lysyl-tRNA synthetase compare
Atu2615 -1.0 -5.2 hypothetical protein compare
Atu0784 -1.0 -2.3 hypothetical protein compare
Atu2057 -1.0 -2.3 DNA helicase II compare
Atu1874 -1.0 -2.0 RecA protein compare
Atu0971 -1.0 -2.8 two component sensor kinase compare
Atu1163 -0.9 -1.2 exopolysaccharide II synthesis transcriptional activator ExpG compare
Atu3755 -0.9 -3.4 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
Atu1077 -0.9 -2.9 DNA repair protein compare
Atu8056 -0.9 -1.2 hypothetical protein compare
Atu3739 -0.9 -2.6 phosphoglycerate kinase compare
Atu3750 -0.9 -1.8 thiamine-phosphate pyrophosphorylase compare
Atu0659 -0.9 -3.8 NTP pyrophosphohydrolase, MutT family compare
Atu4882 -0.9 -2.4 hypothetical protein compare
Atu8087 -0.9 -1.1 putative peptidoglycan binding protein compare
Atu1891 -0.9 -2.9 cobalamin biosynthesis protein compare
Atu1076 -0.9 -2.9 colicin V production protein compare
Atu3468 -0.9 -0.8 hypothetical protein compare
Atu3469 -0.9 -2.3 phosphoglyceromutase compare
Atu0043 -0.8 -1.8 imidazoleglycerol-phosphate dehydratase compare
Atu0030 -0.8 -1.4 phosphocarrier protein HPr compare
Atu1513 -0.8 -4.2 ABC excinuclease subunit A compare
Atu0777 -0.8 -0.9 hypothetical protein compare
Atu0894 -0.8 -1.7 ABC transporter, membrane spanning protein compare
Atu8012 -0.8 -1.4 hypothetical protein compare
Atu5430 -0.8 -0.7 hypothetical protein compare
Atu1028 -0.8 -1.8 hypothetical protein compare
Atu2616 -0.8 -3.8 hypothetical protein compare
Atu2555 -0.8 -1.9 L-lysine 2,3-aminomutase compare
Atu1364 -0.8 -2.8 ATP-dependent Clp protease, ATP-binding subunit compare
Atu0400 -0.8 -2.9 orotate phosphoribosyltransferase compare
Atu3486 -0.8 -2.8 DeoR family transcriptional regulator compare
Atu2800 -0.8 -1.3 precorrin-3B C17-methyltransferase compare
Atu0050 -0.8 -3.5 two component response regulator compare
Atu1620 -0.8 -5.4 triosephosphate isomerase compare
Atu0269 -0.8 -3.2 exodeoxyribonuclease VII large subunit compare
Atu4148 -0.7 -4.2 UDP-glucuronic acid epimerase compare
Atu0051 -0.7 -3.2 two component sensor kinase compare
Atu2801 -0.7 -2.1 precorrin-2 C20 methyltransferase compare
Atu2807 -0.7 -4.5 cob(I)alamin adenosyltransferase compare
Atu1099 -0.7 -3.3 hypothetical protein compare
Atu3481 -0.7 -3.4 enoyl-CoA hydratase compare
Atu1204 -0.7 -3.1 potassium uptake protein compare
Atu2640 -0.7 -2.7 hypothetical protein compare
Atu0189 -0.7 -1.6 ABC transporter, membrane spanning protein (peptide) compare
Atu1141 -0.7 -3.3 Phosphoribosylglycinamide synthetase compare
Atu2234 -0.7 -1.7 hypothetical protein compare
Atu1592 -0.7 -2.7 hypothetical protein compare
Atu3593 -0.7 -4.3 hypothetical protein compare
Atu2824 -0.7 -2.4 hypothetical protein compare
Atu1021 -0.7 -1.6 outer membrane protein compare
Atu1628 -0.7 -2.7 hypothetical protein compare
Atu4468 -0.7 -4.1 iron transport ABC transporter permease compare
Atu3730 -0.7 -0.9 hypothetical protein compare
Atu2532 -0.7 -2.3 transcriptional regulator, MarR family compare
Atu1850 -0.7 -2.6 phosphoribosylformylglycinamidine synthetase II compare
Atu5010 -0.7 -2.2 hypothetical protein compare
Atu4099 -0.7 -3.4 hypothetical protein compare
Atu1344 -0.7 -1.3 hypothetical protein compare
Atu1774 -0.7 -3.9 ABC transporter, substrate binding protein (peptide) compare
Atu2406 -0.7 -2.1 hypothetical protein compare
Atu0190 -0.7 -3.2 ABC transporter, nucleotide binding/ATPase protein (peptide) compare
Atu5470 -0.7 -1.4 hypothetical protein compare
Atu2832 -0.7 -2.2 tRNA modification GTPase compare
Atu2634 -0.6 -0.7 hypothetical protein compare
Atu2795 -0.6 -3.3 cobalamin biosynthetic protein compare
Atu0185 -0.6 -2.5 methylglyoxal synthase compare
Atu4514 -0.6 -2.3 RpiR family transcriptional regulator compare
Atu0895 -0.6 -1.7 ABC transporter, substrate binding protein compare
Atu0658 -0.6 -4.3 phosphate permease compare
Atu2803 -0.6 -1.6 Cobalamin biosynthesis associated protein compare
Atu0322 -0.6 -2.8 enoyl CoA hydratase compare
Atu0419 -0.6 -1.6 two component sensor kinase compare
Atu3740 -0.6 -3.6 fructose bisphosphate aldolase compare
Atu1542 -0.6 -2.5 Bifunctional adenosylcobalamin biosynthesis protein cobP compare
Atu1793 -0.6 -4.2 phosphatidylcholine synthase compare
Atu0977 -0.6 -1.7 serine protease DO-like protease compare
Atu2799 -0.6 -2.1 precorrin-6x reductase compare
Atu3121 -0.6 -0.6 cold shock protein compare
Atu2821 -0.6 -3.1 transcriptional regulator, GntR family compare
Atu2798 -0.6 -2.7 precorrin-6y methyltransferase compare
Atu4346 -0.6 -3.9 hypothetical protein compare
Atu3337 -0.6 -4.3 LacI family transcriptional regulator compare
Atu0086 -0.6 -0.9 ribosome-binding factor A compare
Atu4470 -0.6 -2.9 iron ABC transporter ATPase compare
Atu4773 -0.6 -1.2 two component response regulator compare
Atu2052 -0.6 -2.5 hypothetical protein compare
Atu3757 -0.6 -1.1 hypothetical protein compare
Atu3721 -0.6 -1.7 hypothetical protein compare
Atu2344 -0.6 -1.0 lactoylglutathione lyase compare
Atu2831 -0.6 -2.2 glucose inhibited division protein A compare
Atu2584 -0.6 -2.2 hypothetical protein compare
Atu1683 -0.6 -1.2 hypothetical protein compare
Atu1845 -0.6 -2.6 phosphoribosylformylglycinamidine synthase I compare
Atu2789 -0.6 -1.5 hypothetical protein compare
Atu3911 -0.6 -2.3 hypothetical protein compare
Atu1254 -0.6 -1.3 transcriptional regulator, ArsR family compare
Atu5057 -0.6 -1.5 hypothetical protein compare
Atu2802 -0.6 -3.4 precorrin-8X methylmutase compare
Atu6114 -0.6 -1.0 hypothetical protein compare
Atu4364 -0.5 -2.7 LacI family transcriptional regulator compare
Atu0493 -0.5 -3.6 hypothetical protein compare
Atu4072 -0.5 -0.9 nodulation protein N compare
Atu4406 -0.5 -1.9 periplasmic nitrate reductase, ferredoxin-like protein compare
Atu4887 -0.5 -1.4 hypothetical protein compare
Atu2746 -0.5 -1.4 hypothetical protein compare
Atu4875 -0.5 -2.9 hypothetical protein compare
Atu0038 -0.5 -2.2 phosphoribosyl-ATP pyrophosphohydrolase compare
Atu3022 -0.5 -3.5 sugar ABC transporter permease compare
Atu0986 -0.5 -0.8 hypothetical protein compare
Atu1851 -0.5 -1.5 BolA/YrbA family protein compare
Atu8019 -0.5 -1.5 hypothetical protein compare
Atu3485 -0.5 -3.2 short chain dehydrogenase compare
Atu0421 -0.5 -0.9 ABC transporter, membrane spanning protein compare
Atu2267 -0.5 -3.0 hypothetical protein compare
Atu2021 -0.5 -2.8 transcriptional regulator, AraC family compare
Atu4888 -0.5 -2.1 hypothetical protein compare
Atu3021 -0.5 -2.9 sugar ABC transporter ATPase compare
Atu3396 -0.5 -3.7 ABC transporter substrate-binding protein compare
Atu2809 -0.5 -2.8 cobalamin biosynthesis protein compare
Atu1677 -0.5 -2.0 queuine tRNA-ribosyltransferase compare
Atu2115 -0.5 -2.6 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
Atu3476 -0.5 -2.0 AsnC family transcriptional regulator compare
Atu8167 -0.5 -3.2 putative transmembrane protein compare
Atu0368 -0.5 -2.0 tRNA pseudouridine synthase I compare
Atu3608 -0.5 -1.6 hypothetical protein compare
Atu1127 -0.5 -1.3 molybdopterin converting factor small subunit compare
Atu1417 -0.5 -2.7 enoyl-CoA hydratase compare
Atu8018 -0.5 -0.6 hypothetical protein compare
Atu0357 -0.5 -2.3 phosphate starvation inducible protein compare
Atu4874 -0.5 -3.2 hypothetical protein compare
Atu0422 -0.5 -0.8 ABC transporter, membrane spanning protein compare
Atu0036 -0.5 -1.3 hypothetical protein compare
Atu1660 -0.5 -1.9 hypothetical protein compare
Atu2208 -0.5 -2.1 secretion chaperone compare
Atu0031 -0.4 -0.7 PTS system, IIA component compare
Atu1075 -0.4 -2.4 amidophosphoribosyltransferase compare
Atu3249 -0.4 -2.8 septum formation inhibitor compare
Atu2583 -0.4 -3.3 glycosyltransferase compare
Atu1323 -0.4 -1.5 hypothetical protein compare
Atu1741 -0.4 -1.8 hypothetical protein compare
Atu2184 -0.4 -2.2 transcriptional regulator, AsnC family compare
Atu0544 -0.4 -1.0 hypothetical protein compare
Atu3707 -0.4 -1.5 phosphoserine aminotransferase compare
Atu5106 -0.4 -1.8 DNA binding protein compare
Atu1140 -0.4 -2.2 phosphoribosyalaminoimidazole-succinocarboxamide synthase compare
Atu3623 -0.4 -1.7 DnaJ family molecular chaperone compare
Atu0434 -0.4 -0.7 2'-deoxycytidine 5'-triphosphate deaminase compare
Atu4872 -0.4 -2.9 LysR family transcriptional regulator compare
Atu0340 -0.4 -1.2 SAM dependent methyltransferase compare
Atu3248 -0.4 -2.6 cell division inhibitor compare
Atu8174 -0.4 -1.5 hypothetical protein compare
Atu1466 -0.4 -1.0 hypothetical protein compare
Atu1302 -0.4 -1.4 hypothetical protein compare
Atu0924 -0.4 -1.2 hypothetical protein compare
Atu1258 -0.4 -2.0 ATP-dependent Clp protease, proteolytic subunit compare
Atu4686 -0.4 -1.4 hypothetical protein compare
Atu3532 -0.4 -1.9 GntR family transcriptional regulator compare
Atu1449 -0.4 -1.6 potassium uptake protein compare
Atu8156 -0.4 -1.6 hypothetical protein compare
Atu3912 -0.4 -2.1 hypothetical protein compare
Atu3566 -0.4 -1.3 hypothetical protein compare
Atu2804 -0.4 -2.9 cobaltochelatase subunit compare
Atu2204 -0.4 -1.1 hypothetical protein compare
Atu1361 -0.4 -2.0 hypothetical protein compare
Atu0101 -0.4 -1.1 cytochrome c compare
Atu2025 -0.4 -1.4 transcriptional regulator compare
Atu1803 -0.4 -1.9 cold shock protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in lb experiments