Experiment set12IT001 for Pseudomonas putida KT2440

Compare to:

Vanillin carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
PP_1377 -5.6 -9.8 beta-ketoadipyl-CoA thiolase compare
PP_4656 -5.4 -9.4 protocatechuate 3,4-dioxygenase beta chain compare
PP_1379 -5.4 -8.9 3-carboxy-cis,cis-muconate cycloisomerase compare
PP_4655 -4.9 -8.5 protocatechuate 3,4-dioxygenase alpha chain compare
PP_1616 -4.9 -11.4 formaldehyde dehydrogenase, glutathione-dependent compare
PP_1380 -4.9 -7.5 3-oxoadipate enol-lactonase 2 compare
PP_1375 -4.7 -12.0 transcription regulatory protein (pca regulon) compare
PP_3952 -4.6 -9.3 3-oxoadipate CoA-transferase subunit A compare
PP_3737 -4.5 -11.1 vanillate O-demethylase oxidoreductase compare
PP_3736 -4.4 -11.4 vanillate O-demethylase oxygenase subunit compare
PP_1292 -3.2 -5.9 Cyclic pyranopterin monophosphate synthase accessory protein compare
PP_3829 -3.1 -5.7 Molybdenum transport system permease protein ModB compare
PP_2123 -2.9 -10.1 molybdenum::molybdopterin ligase compare
PP_3828 -2.5 -5.9 Molybdate-binding periplasmic protein compare
PP_1294 -2.4 -5.0 molybdopterin synthase large subunit compare
PP_1615 -2.1 -7.0 Transcriptional regulator, LysR family compare
PP_4622 -2.1 -6.1 Hmg transcriptional repressor compare
PP_4231 -1.9 -5.7 putative Xanthine dehydrogenase accessory factor compare
PP_3622 -1.9 -12.0 vanillin dehydrogenase, iorB-like component (from data) compare
PP_3830 -1.7 -8.0 Molybdenum import ATP-binding protein ModC compare
PP_3623 -1.5 -9.0 vanillin dehydrogenase, cytochrome c component (from data) compare
PP_3493 -1.5 -6.5 Transcriptional regulator, LysR family compare
PP_0621 -1.5 -5.2 conserved protein of unknown function compare
PP_1378 -1.5 -5.2 alpha-ketoglutarate permease compare
PP_1617 -1.1 -6.2 S-formylglutathione hydrolase / S-lactoylglutathione hydrolase compare


Specific phenotypes for carbon source Vanillin across organisms