Experiment set11TCH534 for Dickeya dadantii 3937

Compare to:

Stem-Atlantic

200 most important genes:

  gene name fitness t score description  
DDA3937_RS13360 -5.6 -2.1 flagellar hook-basal body complex protein FliE compare
DDA3937_RS13480 -4.8 -8.0 flagellar basal body rod protein FlgB compare
DDA3937_RS10140 -4.7 -3.0 bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase compare
DDA3937_RS13495 -4.5 -3.6 flagellar export chaperone FlgN compare
DDA3937_RS13385 -4.5 -5.3 flagella biosynthesis chaperone FliJ compare
DDA3937_RS18585 -4.4 -1.5 adenylosuccinate synthase compare
DDA3937_RS13510 -4.3 -14.4 flagellar type III secretion system protein FlhB compare
DDA3937_RS13505 -4.2 -15.4 flagellar biosynthesis protein FlhA compare
DDA3937_RS13340 -4.2 -5.7 flagellin FliC compare
DDA3937_RS13565 -4.1 -10.4 flagellar transcriptional regulator FlhD compare
DDA3937_RS13490 -4.1 -1.0 anti-sigma-28 factor FlgM compare
DDA3937_RS13420 -4.0 -9.1 flagellar biosynthesis protein FliQ compare
DDA3937_RS16535 -3.9 -5.6 glutamate 5-kinase compare
DDA3937_RS10480 -3.9 -2.1 glutamine amidotransferase compare
DDA3937_RS13515 -3.9 -9.4 protein phosphatase CheZ compare
DDA3937_RS15545 -3.9 -1.6 cysteine desulfurase compare
DDA3937_RS00600 -3.9 -1.3 DcrB family lipoprotein compare
DDA3937_RS13380 -3.8 -17.8 flagellum-specific ATP synthase FliI compare
DDA3937_RS11335 -3.8 -6.9 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
DDA3937_RS04125 -3.8 -4.4 acetyltransferase compare
DDA3937_RS06025 -3.7 -8.8 phosphoribosylformylglycinamidine cyclo-ligase compare
DDA3937_RS18685 -3.7 -12.7 WbeA compare
DDA3937_RS18670 -3.7 -4.0 ABC transporter permease compare
DDA3937_RS13390 -3.7 -8.7 flagellar hook-length control protein FliK compare
DDA3937_RS13485 -3.7 -7.4 flagellar basal body P-ring formation protein FlgA compare
DDA3937_RS18405 -3.7 -12.7 threonine synthase compare
DDA3937_RS15765 -3.6 -18.6 RNA polymerase sigma factor RpoE compare
DDA3937_RS15420 -3.6 -6.0 IMP dehydrogenase compare
DDA3937_RS13470 -3.6 -13.8 flagellar hook assembly protein FlgD compare
DDA3937_RS10985 -3.6 -2.9 peptide chain release factor N(5)-glutamine methyltransferase compare
DDA3937_RS13405 -3.6 -9.9 flagellar motor switch protein FliN compare
DDA3937_RS13530 -3.6 -8.6 protein-glutamate O-methyltransferase CheR compare
DDA3937_RS13410 -3.5 -8.1 flagellar biosynthetic protein FliO compare
DDA3937_RS13365 -3.5 -15.7 flagellar M-ring protein FliF compare
DDA3937_RS00580 -3.5 -14.7 2-dehydro-3-deoxygluconokinase compare
DDA3937_RS18410 -3.5 -8.4 homoserine kinase compare
DDA3937_RS18665 -3.5 -18.4 GDP-mannose 4,6-dehydratase compare
DDA3937_RS05150 -3.5 -5.3 sigma E protease regulator RseP compare
DDA3937_RS13545 -3.4 -16.5 chemotaxis protein CheA compare
DDA3937_RS10465 -3.4 -9.3 tryptophan synthase subunit beta compare
DDA3937_RS13430 -3.4 -12.9 flagellar hook-associated protein FlgL compare
DDA3937_RS13400 -3.4 -10.6 flagellar motor switch protein FliM compare
DDA3937_RS06075 -3.4 -3.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
DDA3937_RS05615 -3.3 -2.0 cytochrome o ubiquinol oxidase subunit II compare
DDA3937_RS13435 -3.3 -17.5 flagellar hook-associated protein FlgK compare
DDA3937_RS13465 -3.3 -15.9 flagellar hook protein FlgE compare
DDA3937_RS10845 -3.3 -14.6 virulence factor SrfB compare
DDA3937_RS13550 -3.2 -11.8 flagellar motor protein MotB compare
DDA3937_RS13560 -3.2 -9.4 flagellar transcriptional regulator FlhC compare
DDA3937_RS14435 -3.2 -22.0 amidophosphoribosyltransferase compare
DDA3937_RS01215 -3.2 -8.3 phosphoribosylamine--glycine ligase compare
DDA3937_RS22035 -3.2 -2.0 immunity protein RhsIC compare
DDA3937_RS13540 -3.2 -8.2 chemotaxis protein CheW compare
DDA3937_RS13300 -3.2 -8.5 RNA polymerase sigma factor FliA compare
DDA3937_RS10850 -3.2 -15.6 virulence factor compare
DDA3937_RS10485 -3.2 -11.0 anthranilate synthase component 1 compare
DDA3937_RS18680 -3.2 -4.0 GDP-L-fucose synthase compare
DDA3937_RS13460 -3.2 -9.0 flagellar basal body rod protein FlgF compare
DDA3937_RS16470 -3.2 -2.2 hypothetical protein compare
DDA3937_RS13425 -3.2 -8.5 flagellar type III secretion system protein FliR compare
DDA3937_RS13345 -3.2 -4.8 flagellar filament capping protein FliD compare
DDA3937_RS06490 -3.2 -1.6 cyd operon protein YbgE compare
DDA3937_RS13370 -3.2 -9.3 flagellar motor switch protein FliG compare
DDA3937_RS14630 -3.1 -3.8 tRNA-Arg compare
DDA3937_RS13160 -3.1 -2.0 ribonuclease E compare
DDA3937_RS13555 -3.1 -9.1 flagellar motor stator protein MotA compare
DDA3937_RS09670 -3.1 -9.0 3-phosphoserine/phosphohydroxythreonine transaminase compare
DDA3937_RS13415 -3.1 -7.9 flagellar type III secretion system pore protein FliP compare
DDA3937_RS13455 -3.1 -7.0 flagellar basal-body rod protein FlgG compare
DDA3937_RS10840 -3.1 -8.2 hypothetical protein compare
DDA3937_RS19615 -3.1 -4.2 two-component system sensor histidine kinase EnvZ compare
DDA3937_RS18660 -3.1 -18.0 phosphomannomutase/phosphoglucomutase compare
DDA3937_RS13440 -3.1 -11.1 flagellar assembly peptidoglycan hydrolase FlgJ compare
DDA3937_RS10460 -3.0 -9.2 tryptophan synthase subunit alpha compare
DDA3937_RS13375 -3.0 -3.0 flagellar assembly protein FliH compare
DDA3937_RS15655 -3.0 -18.9 phosphoribosylformylglycinamidine synthase compare
DDA3937_RS01820 -3.0 -2.8 tol-pal system-associated acyl-CoA thioesterase compare
DDA3937_RS18655 -3.0 -13.9 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
DDA3937_RS20305 -2.9 -5.8 Sec-independent protein translocase subunit TatC compare
DDA3937_RS13395 -2.9 -7.7 flagellar basal body-associated protein FliL compare
DDA3937_RS15705 -2.8 -7.1 cyclic-guanylate-specific phosphodiesterase compare
DDA3937_RS01495 -2.8 -7.1 ribosome-associated protein compare
DDA3937_RS13450 -2.8 -8.2 flagellar basal body L-ring protein FlgH compare
DDA3937_RS07765 -2.8 -4.1 ABC transporter ATP-binding protein compare
DDA3937_RS12855 -2.8 -10.4 quinone-dependent dihydroorotate dehydrogenase compare
DDA3937_RS01220 -2.8 -11.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
DDA3937_RS18305 -2.7 -14.0 carbamoyl-phosphate synthase large subunit compare
DDA3937_RS16530 -2.7 -11.6 glutamate-5-semialdehyde dehydrogenase compare
DDA3937_RS01600 -2.7 -7.4 outer membrane-stress sensor serine endopeptidase DegS compare
DDA3937_RS17305 -2.7 -3.4 pyrroline-5-carboxylate reductase compare
DDA3937_RS19660 -2.7 -12.6 4-alpha-glucanotransferase compare
DDA3937_RS13305 -2.6 -8.8 hypothetical protein compare
DDA3937_RS13475 -2.6 -4.1 flagellar basal body rod protein FlgC compare
DDA3937_RS06070 -2.6 -6.2 outer membrane protein assembly factor BamC compare
DDA3937_RS06040 -2.6 -1.3 DnaA inactivator Hda compare
DDA3937_RS00100 -2.6 -14.4 thiol:disulfide interchange protein DsbA compare
DDA3937_RS13445 -2.5 -5.9 flagellar basal body P-ring protein FlgI compare
DDA3937_RS11180 -2.5 -4.6 fatty acid metabolism transcriptional regulator FadR compare
DDA3937_RS18010 -2.4 -0.9 DUF721 domain-containing protein compare
DDA3937_RS01065 -2.4 -0.8 elongation factor Tu compare
DDA3937_RS17250 -2.4 -1.4 hypothetical protein compare
DDA3937_RS09575 -2.4 -0.9 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
DDA3937_RS10980 -2.4 -6.0 tetratricopeptide repeat-containing protein compare
DDA3937_RS05640 -2.3 -9.6 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
DDA3937_RS09345 -2.3 -0.9 IS200/IS605 family transposase compare
DDA3937_RS00900 -2.3 -5.9 cell division protein ZapB compare
DDA3937_RS09590 -2.3 -4.8 leucine-responsive transcriptional regulator Lrp compare
DDA3937_RS13520 -2.3 -5.3 chemotaxis response regulator CheY compare
DDA3937_RS20415 -2.3 -3.2 rhodanese-like domain-containing protein compare
DDA3937_RS13525 -2.3 -7.8 chemotaxis response regulator protein-glutamate methylesterase compare
DDA3937_RS11465 -2.3 -10.0 EAL domain-containing protein compare
DDA3937_RS10540 -2.2 -1.6 HTH-type transcriptional regulator CysB compare
DDA3937_RS21375 -2.2 -3.8 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
DDA3937_RS05200 -2.2 -4.4 VOC family protein compare
DDA3937_RS16935 -2.2 -2.3 phosphoadenylyl-sulfate reductase compare
DDA3937_RS11325 -2.2 -8.0 cupin domain-containing protein compare
DDA3937_RS19780 -2.1 -1.4 gluconokinase compare
DDA3937_RS20155 -2.1 -12.3 dihydroxy-acid dehydratase compare
DDA3937_RS10315 -2.1 -3.5 trimeric intracellular cation channel family protein compare
DDA3937_RS10475 -2.1 -8.4 anthranilate phosphoribosyltransferase compare
DDA3937_RS06145 -2.1 -1.7 lipoyl(octanoyl) transferase LipB compare
DDA3937_RS06770 -2.1 -1.7 oligosaccharide flippase family protein compare
DDA3937_RS22235 -2.1 -4.7 immunity 8 family protein compare
DDA3937_RS11035 -2.1 -3.6 redox-regulated ATPase YchF compare
DDA3937_RS00135 -2.1 -1.4 glutamate--ammonia ligase compare
DDA3937_RS20535 -2.1 -8.0 orotate phosphoribosyltransferase compare
DDA3937_RS03095 -2.1 -9.5 lipoprotein NlpI compare
DDA3937_RS22435 -2.1 -1.7 AlpA family transcriptional regulator compare
DDA3937_RS19930 -2.1 -3.2 uroporphyrinogen-III C-methyltransferase compare
DDA3937_RS13320 -2.0 -10.2 ATP-grasp domain-containing protein compare
DDA3937_RS18310 -2.0 -8.1 glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit compare
DDA3937_RS13350 -2.0 -3.7 flagellar export chaperone FliS compare
DDA3937_RS01000 -2.0 -2.9 glutamate racemase compare
DDA3937_RS17180 -2.0 -6.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
DDA3937_RS04960 -2.0 -2.2 thymidylate synthase compare
DDA3937_RS06740 -2.0 -4.9 glucose-1-phosphate thymidylyltransferase RfbA compare
DDA3937_RS05105 -2.0 -3.8 bifunctional uridylyltransferase/uridylyl-removing protein GlnD compare
DDA3937_RS14465 -2.0 -1.7 tRNA pseudouridine(38-40) synthase TruA compare
DDA3937_RS15450 -2.0 -2.5 outer membrane protein assembly factor BamB compare
DDA3937_RS15110 -1.9 -5.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
DDA3937_RS13330 -1.9 -12.1 methyltransferase regulatory domain-containing protein compare
DDA3937_RS17320 -1.9 -5.3 XTP/dITP diphosphatase compare
DDA3937_RS13275 -1.9 -8.1 RpiB/LacA/LacB family sugar-phosphate isomerase compare
DDA3937_RS10470 -1.9 -7.5 bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF compare
DDA3937_RS19880 -1.9 -4.8 DNA helicase II compare
DDA3937_RS07760 -1.9 -2.5 iron ABC transporter permease compare
DDA3937_RS15780 -1.9 -6.4 ATP-dependent RNA helicase SrmB compare
DDA3937_RS14440 -1.9 -7.2 colicin V production protein compare
DDA3937_RS13315 -1.9 -7.8 Gfo/Idh/MocA family oxidoreductase compare
DDA3937_RS02425 -1.9 -5.8 phosphoserine phosphatase compare
DDA3937_RS02410 -1.9 -1.8 5-formyltetrahydrofolate cyclo-ligase compare
DDA3937_RS06475 -1.8 -1.9 succinate--CoA ligase subunit alpha compare
DDA3937_RS15305 -1.8 -1.8 TIM barrel protein compare
DDA3937_RS13170 -1.8 -5.7 dihydroorotase compare
DDA3937_RS01460 -1.8 -9.7 metalloprotease TldD compare
DDA3937_RS13355 -1.8 -2.5 flagellar protein FliT compare
DDA3937_RS12525 -1.8 -4.3 orotidine-5'-phosphate decarboxylase compare
DDA3937_RS14950 -1.8 -4.8 hypothetical protein compare
DDA3937_RS20265 -1.8 -0.7 YeeE/YedE family protein compare
DDA3937_RS06350 -1.8 -3.6 replication initiation negative regulator SeqA compare
DDA3937_RS15530 -1.8 -1.6 co-chaperone HscB compare
DDA3937_RS11365 -1.8 -1.6 oligogalacturonate-specific porin KdgM compare
DDA3937_RS15745 -1.8 -4.1 elongation factor 4 compare
DDA3937_RS16765 -1.8 -8.7 multidrug efflux MFS transporter permease subunit EmrB compare
DDA3937_RS06990 -1.7 -3.2 RHS domain-containing protein compare
DDA3937_RS20130 -1.7 -8.8 ketol-acid reductoisomerase compare
DDA3937_RS07750 -1.7 -2.3 iron-siderophore ABC transporter substrate-binding protein compare
DDA3937_RS16760 -1.7 -7.4 multidrug efflux MFS transporter periplasmic adaptor subunit EmrA compare
DDA3937_RS01500 -1.7 -4.4 metalloprotease PmbA compare
DDA3937_RS03455 -1.7 -6.3 kdo(2)-lipid IV(A) palmitoleoyltransferase compare
DDA3937_RS18415 -1.7 -6.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
DDA3937_RS14475 -1.7 -4.8 4-phosphoerythronate dehydrogenase PdxB compare
DDA3937_RS18675 -1.7 -3.2 ABC transporter ATP-binding protein compare
DDA3937_RS11185 -1.7 -4.8 disulfide bond formation protein DsbB compare
DDA3937_RS22485 -1.6 -2.5 hypothetical protein compare
DDA3937_RS01695 -1.6 -2.8 divisome-associated lipoprotein YraP compare
DDA3937_RS09975 -1.6 -1.5 molecular chaperone compare
DDA3937_RS02610 -1.6 -7.1 hypothetical protein compare
DDA3937_RS06535 -1.6 -0.9 tRNA-Lys compare
DDA3937_RS20475 -1.6 -1.2 glycosyltransferase family 4 protein compare
DDA3937_RS11330 -1.6 -5.2 5-dehydro-4-deoxy-D-glucuronate isomerase compare
DDA3937_RS00975 -1.6 -1.1 Si-specific NAD(P)(+) transhydrogenase compare
DDA3937_RS17430 -1.6 -3.7 LysR family transcriptional regulator compare
DDA3937_RS01530 -1.6 -3.1 RNA polymerase factor sigma-54 compare
DDA3937_RS01740 -1.5 -3.2 outer membrane channel protein TolC compare
DDA3937_RS06615 -1.5 -8.3 UDP-glucose 4-epimerase GalE compare
DDA3937_RS19510 -1.5 -2.1 peptidylprolyl isomerase A compare
DDA3937_RS14675 -1.5 -2.1 ABC transporter ATP-binding protein compare
DDA3937_RS12520 -1.5 -3.2 stress response translation initiation inhibitor YciH compare
DDA3937_RS14380 -1.5 -2.5 acetate kinase compare
DDA3937_RS08140 -1.5 -3.7 metal ABC transporter permease compare
DDA3937_RS20465 -1.5 -4.5 O-antigen ligase family protein compare
DDA3937_RS17665 -1.5 -2.6 PAAR domain-containing protein compare
DDA3937_RS09120 -1.5 -1.1 YejL family protein compare
DDA3937_RS22280 -1.5 -0.5 GpE family phage tail protein compare
DDA3937_RS19700 -1.5 -3.0 EAL domain-containing protein compare
DDA3937_RS23390 -1.5 -2.6 hypothetical protein compare
DDA3937_RS12600 -1.5 -2.3 lactoylglutathione lyase compare
DDA3937_RS06210 -1.5 -1.5 amino acid ABC transporter ATP-binding protein compare
DDA3937_RS03300 -1.5 -1.1 site-specific tyrosine recombinase XerD compare


Specific Phenotypes

For 1 genes in this experiment