Experiment set11TCH518 for Dickeya dadantii 3937
Stem-Norland
Group: plantMedia:
Culturing: Dda3937, Potato_stem
By: Juliana on 9/1/21
Specific Phenotypes
For 8 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Bacterial Chemotaxis | 1 |
| D-Galacturonate and D-Glucuronate Utilization | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Pentose and glucuronate interconversions
- Glycine, serine and threonine metabolism
- Phenylalanine, tyrosine and tryptophan biosynthesis
- Biosynthesis of phenylpropanoids
- Biosynthesis of alkaloids derived from shikimate pathway
- Biosynthesis of plant hormones
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| L-tryptophan biosynthesis | 6 | 6 | 2 |
| DIBOA-glucoside biosynthesis | 6 | 1 | 1 |
| superpathway of L-tryptophan biosynthesis | 13 | 13 | 2 |
| superpathway of aromatic amino acid biosynthesis | 18 | 18 | 2 |
| superpathway of benzoxazinoid glucosides biosynthesis | 13 | 1 | 1 |
| superpathway of chorismate metabolism | 59 | 54 | 2 |