Experiment set11TCH514 for Dickeya dadantii 3937
Stem-Norland
Group: plantMedia:
Culturing: Dda3937, Potato_stem
By: Juliana on 9/1/21
Specific Phenotypes
For 4 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Molybdenum cofactor biosynthesis | 2 |
| Nitrate and nitrite ammonification | 2 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| bis(guanylyl molybdenum cofactor) biosynthesis | 2 | 2 | 2 |
| bis(guanylyl tungstenpterin) cofactor biosynthesis | 1 | 1 | 1 |
| guanylyl molybdenum cofactor biosynthesis | 1 | 1 | 1 |
| nitrate reduction III (dissimilatory) | 2 | 2 | 1 |
| nitrate reduction VIIIb (dissimilatory) | 2 | 2 | 1 |
| nitrate reduction VIII (dissimilatory) | 2 | 2 | 1 |
| nitrate reduction IX (dissimilatory) | 2 | 2 | 1 |
| NADH to nitrate electron transfer | 2 | 2 | 1 |
| nitrate reduction VII (denitrification) | 5 | 1 | 1 |
| nitrate reduction I (denitrification) | 5 | 1 | 1 |
| molybdopterin biosynthesis | 6 | 5 | 1 |