Experiment set11IT095 for Agrobacterium fabrum C58

Compare to:

LB control

200 most detrimental genes:

  gene name fitness t score description  
Atu1182 +0.9 1.4 hypothetical protein compare
Atu0026 +0.9 1.3 hypothetical protein compare
Atu5540 +0.7 1.2 hypothetical protein compare
Atu0645 +0.7 1.2 hypothetical protein compare
Atu1952 +0.7 1.6 hypothetical protein compare
Atu2193 +0.7 1.2 hypothetical protein compare
Atu2657 +0.6 2.7 hypothetical protein compare
Atu2442 +0.6 2.4 hypothetical protein compare
Atu0795 +0.6 1.4 hypothetical protein compare
Atu0152 +0.6 1.2 hypothetical protein compare
Atu8056 +0.6 1.1 hypothetical protein compare
Atu2662 +0.6 1.0 acetyltransferase compare
Atu1359 +0.6 1.0 dnaK deletion suppressor protein compare
Atu3461 +0.5 1.8 GntR family transcriptional regulator compare
Atu3775 +0.5 2.0 hypothetical protein compare
Atu3773 +0.5 1.3 hypothetical protein compare
Atu0585 +0.5 1.4 hypothetical protein compare
Atu1260 +0.5 1.3 hypothetical protein compare
Atu3911 +0.5 2.4 hypothetical protein compare
Atu2201 +0.5 1.6 hydrolase compare
Atu2163 +0.5 1.0 hypothetical protein compare
Atu0346 +0.5 1.3 uridylyltransferase/uridylyl-removing enzyme UTase compare
Atu1149 +0.5 1.1 adenylate cyclase compare
Atu1647 +0.5 3.0 ABC transporter, membrane spanning protein compare
Atu1634 +0.5 1.4 hypothetical protein compare
Atu4504 +0.5 3.8 MarR family transcriptional regulator compare
Atu2150 +0.4 3.6 ABC transporter, nucleotide binding/ATPase protein compare
Atu0470 +0.4 1.4 hypothetical protein compare
Atu2139 +0.4 2.3 aldehyde dehydrogenase compare
Atu3780 +0.4 2.4 hypothetical protein compare
Atu1566 +0.4 0.9 hypothetical protein compare
Atu3759 +0.4 1.0 hypothetical protein compare
Atu5115 +0.4 1.4 hypothetical protein compare
Atu1864 +0.4 1.8 putative homoserine/homoserine lactone efflux protein compare
Atu1847 +0.4 1.3 hypothetical protein compare
Atu1629 +0.4 0.9 transcriptional regulator, ArsR family compare
Atu4139 +0.4 1.5 hypothetical protein compare
Atu8195 +0.4 0.7 hypothetical protein compare
Atu0931 +0.4 3.3 penicillin binding protein compare
Atu0551 +0.4 1.4 flagellar protein FLGA precursor compare
Atu1098 +0.4 1.4 hypothetical protein compare
Atu1085 +0.4 2.4 transcriptional regulator, MarR family compare
Atu0874 +0.4 1.8 acetyltransferase compare
Atu1226 +0.4 2.7 exoD protein compare
Atu0272 +0.4 1.6 transcriptional regulator, MarR family compare
Atu8035 +0.4 1.2 hypothetical protein compare
Atu8161 +0.4 0.9 hypothetical protein compare
Atu0925 +0.4 1.1 hypothetical protein compare
Atu1387 +0.4 2.1 transcriptional regulator, GntR family compare
Atu1834 +0.4 2.6 mutT like protein compare
Atu0578 +0.4 1.9 FlbT post-transcriptional regulator of flagellin compare
Atu4643 +0.4 1.7 hypothetical protein compare
Atu4342 +0.4 1.4 hypothetical protein compare
Atu2335 +0.4 0.9 hypothetical protein compare
Atu1851 +0.4 1.4 BolA/YrbA family protein compare
Atu2441 +0.4 1.3 RNA methylase compare
Atu0516 +0.4 2.3 chemotaxis receiver protein compare
Atu4215 +0.4 1.3 cell division protein compare
Atu6165 +0.4 0.7 hypothetical protein compare
Atu1882 +0.4 2.5 usg protein compare
Atu1737 +0.4 1.0 hypothetical protein compare
Atu4818 +0.4 2.1 AsnC family transcriptional regulator compare
Atu4326 +0.4 2.7 proline/glycine betaine transporter compare
Atu5155 +0.4 1.8 MarR family transcriptional regulator compare
Atu4506 +0.4 2.1 hypothetical protein compare
Atu3604 +0.4 0.6 hypoxanthine phosphoribosyltransferase compare
Atu3712 +0.4 0.8 hypothetical protein compare
Atu1570 +0.4 0.6 hypothetical protein compare
Atu5513 +0.4 1.1 cold shock protein compare
Atu0477 +0.4 0.8 hypothetical protein compare
Atu1023 +0.4 1.1 hypothetical protein compare
Atu5430 +0.4 0.8 hypothetical protein compare
Atu1028 +0.4 0.6 hypothetical protein compare
Atu8144 +0.4 1.1 hypothetical protein compare
Atu3317 +0.4 1.5 hypothetical protein compare
Atu8023 +0.4 1.2 hypothetical protein compare
Atu5451 +0.4 0.8 hypothetical protein compare
Atu1185 +0.4 1.2 hypothetical protein compare
Atu1646 +0.4 1.9 ABC transporter, nucleotide binding/ATPase protein compare
Atu3001 +0.4 0.6 hypothetical protein compare
Atu3913 +0.3 2.2 biotin carboxylase compare
Atu5173 +0.3 0.9 dehydrogenase compare
Atu3668 +0.3 1.6 siderophore biosynthesis protein compare
Atu3909 +0.3 2.9 hypothetical protein compare
Atu3095 +0.3 1.4 hypothetical protein compare
Atu8022 +0.3 1.8 hypothetical protein compare
Atu1916 +0.3 1.4 hypothetical protein compare
Atu4540 +0.3 1.3 protocatechuate 3,4-dioxygenase subunit beta compare
Atu8040 +0.3 1.9 hypothetical protein compare
Atu1137 +0.3 2.1 NTP pyrophosphohydrolase, MutT family compare
Atu3370 +0.3 2.1 sugar ABC transporter permease compare
Atu6138 +0.3 2.3 Repressor of the acc and arc operons compare
Atu3044 +0.3 1.3 asparaginase compare
Atu0859 +0.3 1.3 hypothetical protein compare
Atu1702 +0.3 2.0 stationary-phase survival protein compare
Atu1056 +0.3 2.0 hypothetical protein compare
Atu8053 +0.3 1.6 hypothetical protein compare
Atu3150 +0.3 1.4 sugar ABC transporter permease compare
Atu4452 +0.3 1.4 hypothetical protein compare
Atu2578 +0.3 1.1 cAMP-dependent protein kinase regulatory subunit compare
Atu0540 +0.3 1.5 hypothetical protein compare
Atu2104 +0.3 1.3 hypothetical protein compare
Atu1750 +0.3 1.5 phosphoribosyl c-AMP cyclohydrolase compare
Atu5164 +0.3 0.6 type IV secretion protein AvhB3 compare
Atu3566 +0.3 1.7 hypothetical protein compare
Atu3647 +0.3 1.4 hypothetical protein compare
Atu4383 +0.3 1.7 hypothetical protein compare
Atu4869 +0.3 1.3 hypothetical protein compare
Atu2584 +0.3 1.5 hypothetical protein compare
Atu5114 +0.3 1.4 hypothetical protein compare
Atu1897 +0.3 1.8 short chain dehydrogenase compare
Atu0823 +0.3 2.5 ABC transporter, nucleotide binding/ATPase protein compare
Atu1989 +0.3 1.9 two component response regulator compare
Atu4485 +0.3 2.1 beta-glucosidase compare
Atu8029 +0.3 0.8 hypothetical protein compare
Atu3217 +0.3 1.9 aspartate aminotransferase compare
Atu4166 +0.3 1.1 UDP-glucose 4-epimerase compare
Atu0201 +0.3 0.8 hypothetical protein compare
Atu0130 +0.3 1.1 cytidine deaminase compare
Atu1219 +0.3 0.6 hypothetical protein compare
Atu2229 +0.3 1.8 ABC transporter, substrate binding protein (amino acid) compare
Atu2293 +0.3 1.1 hypothetical protein compare
Atu1644 +0.3 1.2 hypothetical protein compare
Atu3920 +0.3 2.1 hypothetical protein compare
Atu3618 +0.3 2.1 hypothetical protein compare
Atu3091 +0.3 1.7 hypothetical protein compare
Atu1565 +0.3 1.5 serine acetyltransferase compare
Atu4161 +0.3 0.8 hypothetical protein compare
Atu4738 +0.3 1.8 chloramphenicol acetyltransferase compare
Atu3089 +0.3 1.7 spermidine/putrescine ABC transporter ATPase compare
Atu8122 +0.3 1.8 hypothetical protein compare
Atu3961 +0.3 1.4 GntR family transcriptional regulator compare
Atu4496 +0.3 1.7 acetyltransferase compare
Atu1863 +0.3 1.6 permease compare
Atu0230 +0.3 0.9 hypothetical protein compare
Atu3117 +0.3 2.2 hypothetical protein compare
Atu1547 +0.3 2.3 magnesium transport protein compare
Atu4537 +0.3 1.4 amino acid ABC transporter permease compare
Atu4239 +0.3 1.6 flavoprotein oxidoreductase compare
Atu2235 +0.3 1.0 hypothetical protein compare
Atu0303 +0.3 1.7 hypothetical protein compare
Atu0479 +0.3 2.0 ABC transporter, substrate binding protein (amino acid) compare
Atu2583 +0.3 2.3 glycosyltransferase compare
Atu0917 +0.3 1.3 hypothetical protein compare
Atu1848 +0.3 1.8 transcriptional regulator, GntR family compare
Atu1191 +0.3 1.3 hypothetical protein compare
Atu1682 +0.3 1.4 hypothetical protein compare
Atu4362 +0.3 1.1 hypothetical protein compare
Atu2232 +0.3 1.5 ATP-dependent Clp protease adaptor protein ClpS compare
Atu2205 +0.3 1.9 transcriptional regulator, MarR family compare
Atu3254 +0.3 2.1 dicarboxylate ABC transporter ATPase compare
Atu5007 +0.3 2.0 santhopine-responsive transcriptional repressor compare
Atu0772 +0.3 1.8 hypothetical protein compare
Atu2272 +0.3 1.8 hypothetical protein compare
Atu3265 +0.3 1.6 hypothetical protein compare
Atu1472 +0.3 1.5 hydrolase compare
Atu0377 +0.3 1.5 hypothetical protein compare
Atu1639 +0.3 1.4 hypothetical protein compare
Atu4796 +0.3 2.1 hypothetical protein compare
Atu2017 +0.3 0.5 hypothetical protein compare
Atu2827 +0.3 0.8 hypothetical protein compare
Atu3613 +0.3 1.6 hypothetical protein compare
Atu2380 +0.3 1.0 hypothetical protein compare
Atu3615 +0.3 1.6 hypothetical protein compare
Atu4214 +0.3 1.0 cold shock protein compare
Atu1482 +0.3 1.2 hypothetical protein compare
Atu5167 +0.3 1.4 type IV secretion protein AvhB6 compare
Atu1031 +0.3 1.0 hypothetical protein compare
Atu1483 +0.3 1.5 cytochrome b561 compare
Atu2285 +0.3 2.3 transcriptional regulator, LuxR family compare
Atu1525 +0.3 1.0 hypothetical protein compare
Atu2187 +0.3 1.3 transcriptional regulator, ArsR family compare
Atu2683 +0.3 0.7 hypothetical protein compare
Atu3261 +0.3 2.0 ABC transporter permease compare
Atu3537 +0.3 1.3 hypothetical protein compare
Atu2067 +0.3 0.4 hypothetical protein compare
Atu2484 +0.3 0.7 hypothetical protein compare
Atu4445 +0.3 1.9 ABC transporter permease compare
Atu4815 +0.3 1.7 glycosyltransferase compare
Atu1249 +0.3 1.8 hypothetical protein compare
Atu1994 +0.3 1.1 acyl-CoA hydrolase compare
Atu4861 +0.3 2.0 IS21 family transposase compare
Atu5207 +0.3 1.7 hypothetical protein compare
Atu4027 +0.3 1.6 cytochrome c2 compare
Atu4082 +0.3 1.7 AsnC family transcriptional regulator compare
Atu1252 +0.3 1.2 hypothetical protein compare
Atu2204 +0.3 0.7 hypothetical protein compare
Atu2671 +0.3 1.6 ABC transporter, membrane spanning protein compare
Atu1499 +0.3 2.0 penicillin binding protein compare
Atu4614 +0.3 1.5 glycosyltransferase compare
Atu3054 +0.3 1.9 hypothetical protein compare
Atu3886 +0.3 1.9 lysophospholipase compare
Atu2077 +0.3 0.7 DNA polymerase III, epsilon subunit compare
Atu0583 +0.3 1.5 hypothetical protein compare
Atu4235 +0.3 2.0 amino acid ABC transporter ATPase/permease compare
Atu1836 +0.3 0.8 hypothetical protein compare
Atu1726 +0.3 1.5 hypothetical protein compare
Atu0861 +0.3 1.0 hypothetical protein compare
Atu0127 +0.3 2.1 ABC transporter, nucleotide binding/ATPase protein (sugar/ribonucleotide) compare
Atu2177 +0.3 1.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Agrobacterium fabrum C58 in stress experiments